RNA–Protein interactions for RNA: ENST00000518263.5

CTNNA1-207, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-207ENST00000518263 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
CTNNA1-207ENST00000518263 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
CTNNA1-207ENST00000518263 PHF23Q9BUL5 403 aaPredicted RBP14.78□□□□□ -0.04
CTNNA1-207ENST00000518263 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
CTNNA1-207ENST00000518263 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
CTNNA1-207ENST00000518263 FOXD1Q16676 465 aa12.94□□□□□ -0.34
CTNNA1-207ENST00000518263 ADRA2BP18089 450 aa12.93□□□□□ -0.34
CTNNA1-207ENST00000518263 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
CTNNA1-207ENST00000518263 KCNA4P22459 653 aa12.51□□□□□ -0.41
CTNNA1-207ENST00000518263 PIAS4Q8N2W9 510 aaPredicted RBP12.29□□□□□ -0.44
CTNNA1-207ENST00000518263 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
CTNNA1-207ENST00000518263 PPP4R3CPQ6ZMV5 832 aa12.2□□□□□ -0.46
CTNNA1-207ENST00000518263 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-207ENST00000518263 SLC4A1APQ9BWU0 796 aaKnown RBP11.96□□□□□ -0.49
CTNNA1-207ENST00000518263 CSRNP3Q8WYN3 585 aa11.88□□□□□ -0.51
CTNNA1-207ENST00000518263 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
CTNNA1-207ENST00000518263 CNKSR2Q8WXI2 1034 aa11.72□□□□□ -0.53
CTNNA1-207ENST00000518263 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
CTNNA1-207ENST00000518263 MSH5O43196 834 aa11.67□□□□□ -0.54
CTNNA1-207ENST00000518263 ZBTB22O15209 634 aa11.55□□□□□ -0.56
CTNNA1-207ENST00000518263 MAPK8IP2Q13387 824 aaPredicted RBP11.54□□□□□ -0.56
CTNNA1-207ENST00000518263 DNAJC5BQ9UF47 199 aa11.44□□□□□ -0.58
CTNNA1-207ENST00000518263 RNF216Q9NWF9 866 aaPredicted RBP11.38□□□□□ -0.59
CTNNA1-207ENST00000518263 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
CTNNA1-207ENST00000518263 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
CTNNA1-207ENST00000518263 HOXD11P31277 338 aaPredicted RBP11.21□□□□□ -0.61
CTNNA1-207ENST00000518263 SLC4A2P04920 1241 aa11.11□□□□□ -0.63
CTNNA1-207ENST00000518263 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-207ENST00000518263 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
CTNNA1-207ENST00000518263 DCAF8L1A6NGE4 600 aa10.69□□□□□ -0.7
CTNNA1-207ENST00000518263 FKBP8Q14318 412 aa10.67□□□□□ -0.7
CTNNA1-207ENST00000518263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.65□□□□□ -0.7
CTNNA1-207ENST00000518263 ATF5Q9Y2D1 282 aaPredicted RBP10.65□□□□□ -0.7
CTNNA1-207ENST00000518263 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
CTNNA1-207ENST00000518263 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
CTNNA1-207ENST00000518263 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-207ENST00000518263 SAMD1Q6SPF0 538 aaPredicted RBP10.55□□□□□ -0.72
CTNNA1-207ENST00000518263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
CTNNA1-207ENST00000518263 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
CTNNA1-207ENST00000518263 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
CTNNA1-207ENST00000518263 ZNF219Q9P2Y4 722 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-207ENST00000518263 APLP2Q06481 763 aa10.29□□□□□ -0.76
CTNNA1-207ENST00000518263 MKRN4PQ13434 485 aaPredicted RBP10.22□□□□□ -0.77
CTNNA1-207ENST00000518263 SPDYE4A6NLX3 237 aa10.17□□□□□ -0.78
CTNNA1-207ENST00000518263 SPINK5Q9NQ38 1064 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-207ENST00000518263 PROM2Q8N271 834 aa10.12□□□□□ -0.79
CTNNA1-207ENST00000518263 TRHP20396 242 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-207ENST00000518263 FBXO3Q9UK99 471 aa10.1□□□□□ -0.79
CTNNA1-207ENST00000518263 RNF39Q9H2S5 420 aa10.09□□□□□ -0.79
CTNNA1-207ENST00000518263 FBLN2P98095 1184 aa10.07□□□□□ -0.8
CTNNA1-207ENST00000518263 POLA2Q14181 598 aa10.07□□□□□ -0.8
CTNNA1-207ENST00000518263 CAPN15O75808 1086 aa10.03□□□□□ -0.8
CTNNA1-207ENST00000518263 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-207ENST00000518263 C1QBPQ07021 282 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-207ENST00000518263 IFNLR1Q8IU57 520 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-207ENST00000518263 ABCB7O75027 752 aa9.91□□□□□ -0.82
CTNNA1-207ENST00000518263 ZBTB12Q9Y330 459 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-207ENST00000518263 PKD2Q13563 968 aa9.8□□□□□ -0.84
CTNNA1-207ENST00000518263 POTEDQ86YR6 584 aa9.8□□□□□ -0.84
CTNNA1-207ENST00000518263 DSG3P32926 999 aa9.78□□□□□ -0.84
CTNNA1-207ENST00000518263 PLCB2Q00722 1185 aa9.78□□□□□ -0.84
CTNNA1-207ENST00000518263 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
CTNNA1-207ENST00000518263 OSCARQ8IYS5 282 aa9.72□□□□□ -0.85
CTNNA1-207ENST00000518263 SSUH2Q9Y2M2 353 aa9.71□□□□□ -0.86
CTNNA1-207ENST00000518263 SPDYE2BA6NHP3 402 aa9.7□□□□□ -0.86
CTNNA1-207ENST00000518263 DCAF8L2P0C7V8 631 aa9.7□□□□□ -0.86
CTNNA1-207ENST00000518263 SPDYE6P0CI01 402 aa9.7□□□□□ -0.86
CTNNA1-207ENST00000518263 SPDYE2Q495Y8 402 aa9.7□□□□□ -0.86
CTNNA1-207ENST00000518263 SPOCK2Q92563 424 aa9.68□□□□□ -0.86
CTNNA1-207ENST00000518263 STAG3Q9UJ98 1225 aa9.68□□□□□ -0.86
CTNNA1-207ENST00000518263 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
CTNNA1-207ENST00000518263 PABPN1Q86U42 306 aaKnown RBP eCLIP9.64□□□□□ -0.87
CTNNA1-207ENST00000518263 HAP1P54257 671 aaPredicted RBP9.62□□□□□ -0.87
CTNNA1-207ENST00000518263 ECM2O94769 699 aaPredicted RBP9.6□□□□□ -0.87
CTNNA1-207ENST00000518263 PLCD3Q8N3E9 789 aa9.6□□□□□ -0.87
CTNNA1-207ENST00000518263 MIER1Q8N108 512 aa9.57□□□□□ -0.88
CTNNA1-207ENST00000518263 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
CTNNA1-207ENST00000518263 RGL2O15211 777 aa9.53□□□□□ -0.88
CTNNA1-207ENST00000518263 BBXQ8WY36 941 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-207ENST00000518263 VSIG10Q8N0Z9 540 aa9.5□□□□□ -0.89
CTNNA1-207ENST00000518263 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-207ENST00000518263 PAXIP1Q6ZW49 1069 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-207ENST00000518263 CIZ1Q9ULV3 898 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-207ENST00000518263 CACNB1Q02641 598 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-207ENST00000518263 ZBTB47Q9UFB7 747 aaPredicted RBP9.43□□□□□ -0.9
CTNNA1-207ENST00000518263 PLEKHG5O94827 1062 aa9.42□□□□□ -0.9
CTNNA1-207ENST00000518263 KDM2AQ9Y2K7 1162 aa9.42□□□□□ -0.9
CTNNA1-207ENST00000518263 CFAP44Q96MT7 982 aa9.41□□□□□ -0.9
CTNNA1-207ENST00000518263 BCANQ96GW7 911 aa9.4□□□□□ -0.9
CTNNA1-207ENST00000518263 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
CTNNA1-207ENST00000518263 SPRYD3Q8NCJ5 442 aa9.36□□□□□ -0.91
CTNNA1-207ENST00000518263 TRIM41Q8WV44 630 aa9.35□□□□□ -0.91
CTNNA1-207ENST00000518263 TSHZ2Q9NRE2 1034 aa9.34□□□□□ -0.91
CTNNA1-207ENST00000518263 NUBP1P53384 320 aa9.32□□□□□ -0.92
CTNNA1-207ENST00000518263 RNF25Q96BH1 459 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-207ENST00000518263 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-207ENST00000518263 GSE1Q14687 1217 aa9.29□□□□□ -0.92
CTNNA1-207ENST00000518263 HS6ST3Q8IZP7 471 aa9.29□□□□□ -0.92
CTNNA1-207ENST00000518263 TAOK2Q9UL54 1235 aa9.29□□□□□ -0.92
CTNNA1-207ENST00000518263 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms