RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 SUPT20HL1Q3ZLR7 823 aa17.7■□□□□ 0.42
SMAD1-216ENST00000515527 FAM205AQ6ZU69 1335 aa17.7■□□□□ 0.42
SMAD1-216ENST00000515527 USP2O75604 605 aaPredicted RBP17.69■□□□□ 0.42
SMAD1-216ENST00000515527 PODNQ7Z5L7 613 aa17.69■□□□□ 0.42
SMAD1-216ENST00000515527 ALYREFQ86V81 257 aaKnown RBP17.69■□□□□ 0.42
SMAD1-216ENST00000515527 SLAIN1Q8ND83 568 aa17.69■□□□□ 0.42
SMAD1-216ENST00000515527 HELBQ8NG08 1087 aaPredicted RBP17.69■□□□□ 0.42
SMAD1-216ENST00000515527 PODXL2Q9NZ53 605 aa17.69■□□□□ 0.42
SMAD1-216ENST00000515527 OTOFQ9HC10 1997 aa17.68■□□□□ 0.42
SMAD1-216ENST00000515527 MCM10Q7L590 875 aa17.68■□□□□ 0.42
SMAD1-216ENST00000515527 NLRP10Q86W26 655 aa17.68■□□□□ 0.42
SMAD1-216ENST00000515527 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
SMAD1-216ENST00000515527 SEMA6BQ9H3T3 888 aa17.68■□□□□ 0.42
SMAD1-216ENST00000515527 PANK3Q9H999 370 aa17.68■□□□□ 0.42
SMAD1-216ENST00000515527 COL4A1P02462 1669 aa17.67■□□□□ 0.42
SMAD1-216ENST00000515527 U2SURPO15042 1029 aaKnown RBP17.67■□□□□ 0.42
SMAD1-216ENST00000515527 PPP2R3BQ9Y5P8 575 aa17.67■□□□□ 0.42
SMAD1-216ENST00000515527 MYO3BQ8WXR4 1341 aa17.67■□□□□ 0.42
SMAD1-216ENST00000515527 MDM2Q00987 491 aaPredicted RBP17.66■□□□□ 0.42
SMAD1-216ENST00000515527 PRKCZQ05513 592 aa17.66■□□□□ 0.42
SMAD1-216ENST00000515527 NBPF12Q5TAG4 269 aaPredicted RBP17.66■□□□□ 0.42
SMAD1-216ENST00000515527 ZNF428Q96B54 188 aa17.66■□□□□ 0.42
SMAD1-216ENST00000515527 C1QTNF1Q9BXJ1 281 aa17.66■□□□□ 0.42
SMAD1-216ENST00000515527 CPA4Q9UI42 421 aa17.66■□□□□ 0.42
SMAD1-216ENST00000515527 COL2A1P02458 1487 aaPredicted RBP17.66■□□□□ 0.42
SMAD1-216ENST00000515527 RPS8P62241 208 aaKnown RBP17.65■□□□□ 0.42
SMAD1-216ENST00000515527 DACT2Q5SW24 774 aa17.65■□□□□ 0.42
SMAD1-216ENST00000515527 BDP1A6H8Y1 2624 aa17.65■□□□□ 0.42
SMAD1-216ENST00000515527 MMP14P50281 582 aa17.64■□□□□ 0.41
SMAD1-216ENST00000515527 CRISPLD2Q9H0B8 497 aa17.64■□□□□ 0.41
SMAD1-216ENST00000515527 MIS18AQ9NYP9 233 aa17.64■□□□□ 0.41
SMAD1-216ENST00000515527 CDH23Q9H251 3354 aa17.63■□□□□ 0.41
SMAD1-216ENST00000515527 INHAP05111 366 aa17.63■□□□□ 0.41
SMAD1-216ENST00000515527 SF3B3Q15393 1217 aaKnown RBP17.63■□□□□ 0.41
SMAD1-216ENST00000515527 HSP90AB3PQ58FF7 597 aa17.63■□□□□ 0.41
SMAD1-216ENST00000515527 C17orf99Q6UX52 265 aa17.63■□□□□ 0.41
SMAD1-216ENST00000515527 KIAA0825Q8IV33 1275 aa17.63■□□□□ 0.41
SMAD1-216ENST00000515527 ZCCHC17Q9NP64 241 aaKnown RBP17.63■□□□□ 0.41
SMAD1-216ENST00000515527 BTBD19C9JJ37 291 aa17.62■□□□□ 0.41
SMAD1-216ENST00000515527 ADCY3O60266 1144 aa17.62■□□□□ 0.41
SMAD1-216ENST00000515527 ADAMTS19Q8TE59 1207 aa17.62■□□□□ 0.41
SMAD1-216ENST00000515527 ZBED3Q96IU2 234 aaPredicted RBP17.62■□□□□ 0.41
SMAD1-216ENST00000515527 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
SMAD1-216ENST00000515527 NBPF3Q9H094 633 aa17.62■□□□□ 0.41
SMAD1-216ENST00000515527 ADGRA2Q96PE1 1338 aa17.62■□□□□ 0.41
SMAD1-216ENST00000515527 CETPP11597 493 aa17.61■□□□□ 0.41
SMAD1-216ENST00000515527 ELNP15502 786 aa17.61■□□□□ 0.41
SMAD1-216ENST00000515527 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
SMAD1-216ENST00000515527 DLGAP5Q15398 846 aa17.61■□□□□ 0.41
SMAD1-216ENST00000515527 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
SMAD1-216ENST00000515527 UHRF1Q96T88 793 aaPredicted RBP17.61■□□□□ 0.41
SMAD1-216ENST00000515527 PAK6Q9NQU5 681 aaPredicted RBP17.61■□□□□ 0.41
SMAD1-216ENST00000515527 MUC6Q6W4X9 2439 aa17.6■□□□□ 0.41
SMAD1-216ENST00000515527 TAF7Q15545 349 aaPredicted RBP17.6■□□□□ 0.41
SMAD1-216ENST00000515527 STRIP1Q5VSL9 837 aa17.6■□□□□ 0.41
SMAD1-216ENST00000515527 ANKLE1Q8NAG6 615 aa17.6■□□□□ 0.41
SMAD1-216ENST00000515527 USP38Q8NB14 1042 aa17.6■□□□□ 0.41
SMAD1-216ENST00000515527 GABRQQ9UN88 632 aa17.6■□□□□ 0.41
SMAD1-216ENST00000515527 ZNF804BA4D1E1 1349 aa17.6■□□□□ 0.41
SMAD1-216ENST00000515527 ECM29Q5VYK3 1845 aa17.6■□□□□ 0.41
SMAD1-216ENST00000515527 CLRN2A0PK11 232 aa17.59■□□□□ 0.41
SMAD1-216ENST00000515527 FCGRTP55899 365 aa17.59■□□□□ 0.41
SMAD1-216ENST00000515527 C11orf49Q9H6J7 331 aa17.59■□□□□ 0.41
SMAD1-216ENST00000515527 VEZTQ9HBM0 779 aa17.59■□□□□ 0.41
SMAD1-216ENST00000515527 MGAMO43451 1857 aa17.58■□□□□ 0.41
SMAD1-216ENST00000515527 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.58■□□□□ 0.4
SMAD1-216ENST00000515527 CSADQ9Y600 493 aa17.58■□□□□ 0.4
SMAD1-216ENST00000515527 DDX60LQ5H9U9 1706 aaKnown RBP17.58■□□□□ 0.4
SMAD1-216ENST00000515527 XDHP47989 1333 aa17.57■□□□□ 0.4
SMAD1-216ENST00000515527 MYO1BO43795 1136 aa17.57■□□□□ 0.4
SMAD1-216ENST00000515527 VGLL4Q14135 290 aa17.57■□□□□ 0.4
SMAD1-216ENST00000515527 FAM89AQ96GI7 184 aa17.57■□□□□ 0.4
SMAD1-216ENST00000515527 TTYH1Q9H313 450 aaPredicted RBP17.57■□□□□ 0.4
SMAD1-216ENST00000515527 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
SMAD1-216ENST00000515527 ATP2B4P23634 1241 aa17.56■□□□□ 0.4
SMAD1-216ENST00000515527 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
SMAD1-216ENST00000515527 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
SMAD1-216ENST00000515527 ATXN2LQ8WWM7 1075 aaKnown RBP17.56■□□□□ 0.4
SMAD1-216ENST00000515527 P2RX7Q99572 595 aaKnown RBP17.56■□□□□ 0.4
SMAD1-216ENST00000515527 MAP3K9P80192 1104 aa17.55■□□□□ 0.4
SMAD1-216ENST00000515527 SNAPC2Q13487 334 aa17.55■□□□□ 0.4
SMAD1-216ENST00000515527 RASA3Q14644 834 aa17.55■□□□□ 0.4
SMAD1-216ENST00000515527 TTLL5Q6EMB2 1281 aa17.55■□□□□ 0.4
SMAD1-216ENST00000515527 ASB2Q96Q27 587 aa17.55■□□□□ 0.4
SMAD1-216ENST00000515527 LBHD1Q9BQE6 289 aaPredicted RBP17.55■□□□□ 0.4
SMAD1-216ENST00000515527 LRFN3Q9BTN0 628 aa17.55■□□□□ 0.4
SMAD1-216ENST00000515527 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.55■□□□□ 0.4
SMAD1-216ENST00000515527 SEC31BQ9NQW1 1179 aa17.55■□□□□ 0.4
SMAD1-216ENST00000515527 FLT3LGP49771 235 aa17.54■□□□□ 0.4
SMAD1-216ENST00000515527 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
SMAD1-216ENST00000515527 RTL5Q5HYW3 569 aaPredicted RBP17.54■□□□□ 0.4
SMAD1-216ENST00000515527 PXYLP1Q8TE99 480 aa17.54■□□□□ 0.4
SMAD1-216ENST00000515527 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
SMAD1-216ENST00000515527 EIF4A1P60842 406 aaKnown RBP17.53■□□□□ 0.4
SMAD1-216ENST00000515527 PCDHAC2Q9Y5I4 1007 aa17.53■□□□□ 0.4
SMAD1-216ENST00000515527 SPDYE5A6NIY4 337 aa17.52■□□□□ 0.4
SMAD1-216ENST00000515527 ANXA1P04083 346 aa17.52■□□□□ 0.4
SMAD1-216ENST00000515527 LRP10Q7Z4F1 713 aa17.52■□□□□ 0.4
SMAD1-216ENST00000515527 MED23Q9ULK4 1368 aa17.52■□□□□ 0.39
SMAD1-216ENST00000515527 MRE11P49959 708 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms