RNA–Protein interactions for RNA: ENST00000515494.5

CDK18-222, Transcript of cyclin dependent kinase 18, human

TSL 1 (best)

Gene CDK18, Length 3,756 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK18-222	ENST00000515494	CCDC102B	Q68D86	513 aa		12.49	□□□□□ -0.41
CDK18-222	ENST00000515494	CHST3	Q7LGC8	479 aa		12.49	□□□□□ -0.41
CDK18-222	ENST00000515494	NEK1	Q96PY6	1258 aa		12.49	□□□□□ -0.41
CDK18-222	ENST00000515494		U3KPZ7	1027 aa	Predicted RBP	12.49	□□□□□ -0.41
CDK18-222	ENST00000515494	SYT1	P21579	422 aa		12.49	□□□□□ -0.41
CDK18-222	ENST00000515494	GJB2	P29033	226 aa		12.49	□□□□□ -0.41
CDK18-222	ENST00000515494	ANKRD18A	Q8IVF6	992 aa		12.49	□□□□□ -0.41
CDK18-222	ENST00000515494	HELLS	Q9NRZ9	838 aa		12.49	□□□□□ -0.41
CDK18-222	ENST00000515494	IDH1	O75874	414 aa	Known RBP	12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	GYS1	P13807	737 aa		12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	BCAM	P50895	628 aa		12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	HMG20B	Q9P0W2	317 aa		12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	MYH3	P11055	1940 aa		12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	CDK11B	P21127	795 aa	Known RBP	12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	PPFIA3	O75145	1194 aa		12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	EN1	Q05925	392 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	CAVIN1	Q6NZI2	390 aa	Known RBP	12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	GAS2L3	Q86XJ1	694 aa		12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	CNBD1	Q8NA66	436 aa		12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.48	□□□□□ -0.41
CDK18-222	ENST00000515494	C4B	P0C0L5	1744 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	RFX7	Q2KHR2	1363 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	IPO4	Q8TEX9	1081 aa	Known RBP	12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	PIH1D3	Q9NQM4	214 aa	Known RBP	12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	RBM27	Q9P2N5	1060 aa	Known RBP	12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	JAG2	Q9Y219	1238 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494		Q6ZUG5	572 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	CDC5L	Q99459	802 aa	Known RBP	12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	FOXP2	O15409	715 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	GYG1	P46976	350 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	PUM3	Q15397	648 aa	Known RBP	12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	SLC27A3	Q5K4L6	730 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	SLC9C2	Q5TAH2	1124 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	GPT2	Q8TD30	523 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	NYX	Q9GZU5	481 aa		12.47	□□□□□ -0.41
CDK18-222	ENST00000515494	STX6	O43752	255 aa		12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	TSGA10IP	Q3SY00	556 aa		12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	VPS37C	A5D8V6	355 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	SERPINB2	P05120	415 aa		12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	KLRK1	P26718	216 aa		12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	BRF1	Q92994	677 aa		12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	GPR101	Q96P66	508 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	SH2B1	Q9NRF2	756 aa	Predicted RBP	12.46	□□□□□ -0.41
CDK18-222	ENST00000515494	RREB1	Q92766	1687 aa		12.46	□□□□□ -0.42
CDK18-222	ENST00000515494	WDR33	Q9C0J8	1336 aa	Known RBP	12.46	□□□□□ -0.42
CDK18-222	ENST00000515494	TAF1L	Q8IZX4	1826 aa		12.46	□□□□□ -0.42
CDK18-222	ENST00000515494	KLHL40	Q2TBA0	621 aa		12.46	□□□□□ -0.42
CDK18-222	ENST00000515494	PPP4R3B	Q5MIZ7	849 aa		12.46	□□□□□ -0.42
CDK18-222	ENST00000515494	COL23A1	Q86Y22	540 aa	Predicted RBP	12.46	□□□□□ -0.42
CDK18-222	ENST00000515494	LPIN2	Q92539	896 aa		12.46	□□□□□ -0.42
CDK18-222	ENST00000515494	SLC5A1	P13866	664 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	HSP90B1	P14625	803 aa	Known RBP	12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	RPS8	P62241	208 aa	Known RBP	12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	EZH2	Q15910	746 aa	Known RBP	12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	PRR5L	Q6MZQ0	368 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	DSCC1	Q9BVC3	393 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	WWC3	Q9ULE0	1092 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	MROH5	Q6ZUA9	1318 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	UQCRHL	A0A096LP55	91 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	UQCRH	P07919	91 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	FGFR2	P21802	821 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	DDR1	Q08345	913 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	KRT32	Q14532	448 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	LY75	O60449	1722 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	SPEF2	Q9C093	1822 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	GPAA1	O43292	621 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	RASGRF1	Q13972	1273 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	FERMT3	Q86UX7	667 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	GPHN	Q9NQX3	736 aa	Predicted RBP	12.45	□□□□□ -0.42
CDK18-222	ENST00000515494	MINPP1	Q9UNW1	487 aa		12.45	□□□□□ -0.42
CDK18-222	ENST00000515494		E7EWF7	191 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	FGA	P02671	866 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	ZSCAN22	P10073	491 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	SF3B3	Q15393	1217 aa	Known RBP	12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	DEFB132	Q7Z7B7	95 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	APPBP2	Q92624	585 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	TCHH	Q07283	1943 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	DDX60	Q8IY21	1712 aa	Known RBP	12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	JAK2	O60674	1132 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	GADD45B	O75293	160 aa	Predicted RBP	12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	CNPY2	Q9Y2B0	182 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	FAM173B	Q6P4H8	233 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	KLHL34	Q8N239	644 aa		12.44	□□□□□ -0.42
CDK18-222	ENST00000515494	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	APOBR	Q0VD83	1088 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	FBXO41	Q8TF61	875 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	DDX11	Q96FC9	970 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	DENND2A	Q9ULE3	1009 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	ZNF532	Q9HCE3	1301 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	AKAP11	Q9UKA4	1901 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	PTMS	P20962	102 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	SLC10A5	Q5PT55	438 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	VPS37D	Q86XT2	251 aa		12.43	□□□□□ -0.42
CDK18-222	ENST00000515494	ABCF2	Q9UG63	623 aa		12.43	□□□□□ -0.42

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