RNA–Protein interactions for RNA: ENST00000515239.5

CSF1R-208, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 3

Gene CSF1R, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-208ENST00000515239 BRI3BPQ8WY22 251 aa15.33■□□□□ 0.04
CSF1R-208ENST00000515239 SHISA4Q96DD7 197 aa15.33■□□□□ 0.04
CSF1R-208ENST00000515239 ZFYVE28Q9HCC9 887 aa15.33■□□□□ 0.04
CSF1R-208ENST00000515239 LEMD3Q9Y2U8 911 aa15.33■□□□□ 0.04
CSF1R-208ENST00000515239 ZNF804BA4D1E1 1349 aa15.33■□□□□ 0.04
CSF1R-208ENST00000515239 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
CSF1R-208ENST00000515239 OPTNQ96CV9 577 aa15.32■□□□□ 0.04
CSF1R-208ENST00000515239 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
CSF1R-208ENST00000515239 ARHGAP39Q9C0H5 1083 aa15.32■□□□□ 0.04
CSF1R-208ENST00000515239 CWC25Q9NXE8 425 aaPredicted RBP15.32■□□□□ 0.04
CSF1R-208ENST00000515239 LAS1LQ9Y4W2 734 aaKnown RBP15.32■□□□□ 0.04
CSF1R-208ENST00000515239 CLRN2A0PK11 232 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 CTSWP56202 376 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 GOLGA2Q08379 1002 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 MTFR1Q15390 333 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 FAM43AQ8N2R8 423 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 GREM2Q9H772 168 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 ELP3Q9H9T3 547 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 AOX1Q06278 1338 aa15.31■□□□□ 0.04
CSF1R-208ENST00000515239 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
CSF1R-208ENST00000515239 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
CSF1R-208ENST00000515239 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
CSF1R-208ENST00000515239 MNX1P50219 401 aaPredicted RBP15.3■□□□□ 0.04
CSF1R-208ENST00000515239 RASA3Q14644 834 aa15.3■□□□□ 0.04
CSF1R-208ENST00000515239 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
CSF1R-208ENST00000515239 CNKSR2Q8WXI2 1034 aa15.3■□□□□ 0.04
CSF1R-208ENST00000515239 CD209Q9NNX6 404 aa15.3■□□□□ 0.04
CSF1R-208ENST00000515239 TRIM35Q9UPQ4 493 aa15.3■□□□□ 0.04
CSF1R-208ENST00000515239 CCL15-CCL14A0A0B4J2E2 113 aa15.29■□□□□ 0.04
CSF1R-208ENST00000515239 CCL15Q16663 113 aa15.29■□□□□ 0.04
CSF1R-208ENST00000515239 CFAP100Q494V2 611 aa15.29■□□□□ 0.04
CSF1R-208ENST00000515239 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.29■□□□□ 0.04
CSF1R-208ENST00000515239 METTL22Q9BUU2 404 aaPredicted RBP15.29■□□□□ 0.04
CSF1R-208ENST00000515239 MYO1BO43795 1136 aa15.28■□□□□ 0.04
CSF1R-208ENST00000515239 TLR2O60603 784 aa15.28■□□□□ 0.04
CSF1R-208ENST00000515239 GTF2A2P52657 109 aa15.28■□□□□ 0.04
CSF1R-208ENST00000515239 LACTBP83111 547 aaPredicted RBP15.28■□□□□ 0.04
CSF1R-208ENST00000515239 VEZTQ9HBM0 779 aa15.28■□□□□ 0.04
CSF1R-208ENST00000515239 F8W031 263 aaPredicted RBP15.27■□□□□ 0.04
CSF1R-208ENST00000515239 GNRH1P01148 92 aa15.27■□□□□ 0.04
CSF1R-208ENST00000515239 LAMA3Q16787 3333 aa15.27■□□□□ 0.03
CSF1R-208ENST00000515239 IRS2Q9Y4H2 1338 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 A0A1W2PPC1 479 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
CSF1R-208ENST00000515239 GJA8P48165 433 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 PRMT2P55345 433 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 KIF22Q14807 665 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 LRCH3Q96II8 777 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 HTATIP2Q9BUP3 242 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 NR2E3Q9Y5X4 410 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 ZSWIM8A7E2V4 1837 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 ECM29Q5VYK3 1845 aa15.26■□□□□ 0.03
CSF1R-208ENST00000515239 SPEF2Q9C093 1822 aa15.25■□□□□ 0.03
CSF1R-208ENST00000515239 SNAP23O00161 211 aa15.25■□□□□ 0.03
CSF1R-208ENST00000515239 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
CSF1R-208ENST00000515239 GJB1P08034 283 aa15.25■□□□□ 0.03
CSF1R-208ENST00000515239 CTGFP29279 349 aa15.25■□□□□ 0.03
CSF1R-208ENST00000515239 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
CSF1R-208ENST00000515239 TEPSINQ96N21 525 aa15.25■□□□□ 0.03
CSF1R-208ENST00000515239 OTOFQ9HC10 1997 aa15.24■□□□□ 0.03
CSF1R-208ENST00000515239 IGHMBP2P38935 993 aaKnown RBP15.24■□□□□ 0.03
CSF1R-208ENST00000515239 VGLL4Q14135 290 aa15.24■□□□□ 0.03
CSF1R-208ENST00000515239 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
CSF1R-208ENST00000515239 MBIPQ9NS73 344 aa15.24■□□□□ 0.03
CSF1R-208ENST00000515239 MAP3K2Q9Y2U5 619 aa15.24■□□□□ 0.03
CSF1R-208ENST00000515239 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
CSF1R-208ENST00000515239 IL1R1P14778 569 aa15.23■□□□□ 0.03
CSF1R-208ENST00000515239 FKBP1AP62942 108 aaKnown RBP15.23■□□□□ 0.03
CSF1R-208ENST00000515239 CHRNDQ07001 517 aa15.23■□□□□ 0.03
CSF1R-208ENST00000515239 C15orf52Q6ZUT6 534 aaKnown RBP15.23■□□□□ 0.03
CSF1R-208ENST00000515239 CCDC146Q8IYE0 955 aa15.23■□□□□ 0.03
CSF1R-208ENST00000515239 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.23■□□□□ 0.03
CSF1R-208ENST00000515239 ZNF70Q9UC06 446 aaPredicted RBP15.23■□□□□ 0.03
CSF1R-208ENST00000515239 SRRDQ9UH36 339 aa15.23■□□□□ 0.03
CSF1R-208ENST00000515239 BTBD19C9JJ37 291 aa15.22■□□□□ 0.03
CSF1R-208ENST00000515239 WDHD1O75717 1129 aaPredicted RBP15.22■□□□□ 0.03
CSF1R-208ENST00000515239 CCL5P13501 91 aa15.22■□□□□ 0.03
CSF1R-208ENST00000515239 ITGA6P23229 1130 aa15.22■□□□□ 0.03
CSF1R-208ENST00000515239 GRK4P32298 578 aa15.22■□□□□ 0.03
CSF1R-208ENST00000515239 RBM5P52756 815 aaKnown RBP eCLIP15.22■□□□□ 0.03
CSF1R-208ENST00000515239 SPDYE2Q495Y8 402 aa15.22■□□□□ 0.03
CSF1R-208ENST00000515239 C17orf99Q6UX52 265 aa15.22■□□□□ 0.03
CSF1R-208ENST00000515239 TRIM47Q96LD4 638 aa15.22■□□□□ 0.03
CSF1R-208ENST00000515239 ZCCHC17Q9NP64 241 aaKnown RBP15.22■□□□□ 0.03
CSF1R-208ENST00000515239 H7C1W4 665 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 TAF5LO75529 589 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 ECM2O94769 699 aaPredicted RBP15.21■□□□□ 0.03
CSF1R-208ENST00000515239 DDX58O95786 925 aaKnown RBP15.21■□□□□ 0.03
CSF1R-208ENST00000515239 ZNF853P0CG23 659 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 CETPP11597 493 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 KCNJ4P48050 445 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 TNFAIP1Q13829 316 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 MPHOSPH8Q99549 860 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 RNF208Q9H0X6 261 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 TDRD3Q9H7E2 651 aaKnown RBP15.21■□□□□ 0.03
CSF1R-208ENST00000515239 STAP2Q9UGK3 403 aa15.21■□□□□ 0.03
CSF1R-208ENST00000515239 RIPOR2Q9Y4F9 1068 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms