RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 FAM170AA1A519 330 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 CCNT1O60563 726 aaKnown RBP16.43■□□□□ 0.22
TRIO-222ENST00000515144 SYKP43405 635 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 PLBD2Q8NHP8 589 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 MCM4P33991 863 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 PCDHB15Q9Y5E8 787 aa16.43■□□□□ 0.22
TRIO-222ENST00000515144 SH3TC1Q8TE82 1336 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 B4DLN1 442 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 MRPL12P52815 198 aaKnown RBP16.42■□□□□ 0.22
TRIO-222ENST00000515144 DHX58Q96C10 678 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 TMC6Q7Z403 805 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 RNF113AO15541 343 aaKnown RBP16.42■□□□□ 0.22
TRIO-222ENST00000515144 DTNBO60941 627 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 RBM25P49756 843 aaKnown RBP16.42■□□□□ 0.22
TRIO-222ENST00000515144 TMTC2Q8N394 836 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 ASIC1P78348 528 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 DYDC1Q8WWB3 177 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 XAGE2Q96GT9 111 aa16.42■□□□□ 0.22
TRIO-222ENST00000515144 GNAT2P19087 354 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 PTGS1P23219 599 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 MAPKAPK5Q8IW41 473 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 TBC1D5Q92609 795 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 CLIP2Q9UDT6 1046 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 IL16Q14005 1332 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 ALDH1L1O75891 902 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 PDE6BP35913 854 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 RRAGBQ5VZM2 374 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 LUZP1Q86V48 1076 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 IQCEQ6IPM2 695 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 CCDC102AQ96A19 550 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 METTL22Q9BUU2 404 aaPredicted RBP16.41■□□□□ 0.22
TRIO-222ENST00000515144 PRDM1O75626 825 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 DLGAP5Q15398 846 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 KIAA0825Q8IV33 1275 aa16.41■□□□□ 0.22
TRIO-222ENST00000515144 ARL1P40616 181 aaPredicted RBP16.4■□□□□ 0.22
TRIO-222ENST00000515144 OTUD6BQ8N6M0 293 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 TTF2Q9UNY4 1162 aaKnown RBP16.4■□□□□ 0.22
TRIO-222ENST00000515144 LETM2Q2VYF4 491 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 HOOK3Q86VS8 718 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 TRIM6Q9C030 488 aaPredicted RBP16.4■□□□□ 0.22
TRIO-222ENST00000515144 SFPQP23246 707 aaKnown RBP eCLIP16.4■□□□□ 0.222e-6■□□□□ 10.2
TRIO-222ENST00000515144 GNAQP50148 359 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 UBE4AQ14139 1066 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 FAM47CQ5HY64 1035 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 RFX1P22670 979 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 CNPY2Q9Y2B0 182 aa16.4■□□□□ 0.22
TRIO-222ENST00000515144 KIF5CO60282 957 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 KIF4BQ2VIQ3 1234 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 GIMAP6Q6P9H5 292 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 DDX21Q9NR30 783 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIO-222ENST00000515144 UGGT1Q9NYU2 1555 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
TRIO-222ENST00000515144 YEATS2Q9ULM3 1422 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 KRT13P13646 458 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 hCG_1642624A0A1W2PR95 340 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 CEP85Q6P2H3 762 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
TRIO-222ENST00000515144 CSADQ9Y600 493 aa16.39■□□□□ 0.21
TRIO-222ENST00000515144 CCDC169A6NNP5 214 aa16.38■□□□□ 0.21
TRIO-222ENST00000515144 ZMYND15Q9H091 742 aa16.38■□□□□ 0.21
TRIO-222ENST00000515144 KDM6BO15054 1643 aa16.38■□□□□ 0.21
TRIO-222ENST00000515144 CCDC102BQ68D86 513 aa16.38■□□□□ 0.21
TRIO-222ENST00000515144 EDC4Q6P2E9 1401 aaKnown RBP16.38■□□□□ 0.21
TRIO-222ENST00000515144 VAMP4O75379 141 aa16.38■□□□□ 0.21
TRIO-222ENST00000515144 CPA1P15085 419 aa16.38■□□□□ 0.21
TRIO-222ENST00000515144 DCPSQ96C86 337 aaKnown RBP16.38■□□□□ 0.21
TRIO-222ENST00000515144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.38■□□□□ 0.214e-15■■□□□ 13.6
TRIO-222ENST00000515144 DCAF17Q5H9S7 520 aaPredicted RBP16.38■□□□□ 0.21
TRIO-222ENST00000515144 CCDC191Q8NCU4 936 aa16.38■□□□□ 0.21
TRIO-222ENST00000515144 SBNO1A3KN83 1393 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 TTC6Q86TZ1 520 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 TBC1D2Q9BYX2 928 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 RTL9Q8NET4 1388 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 PLEKHH1Q9ULM0 1364 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 PARP10Q53GL7 1025 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 CEP135Q66GS9 1140 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 ZNF772Q68DY9 489 aaPredicted RBP16.37■□□□□ 0.21
TRIO-222ENST00000515144 ANKRD44Q8N8A2 993 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 URI1O94763 535 aaPredicted RBP16.37■□□□□ 0.21
TRIO-222ENST00000515144 DISP1Q96F81 1524 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 KCNQ3O43525 872 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 YEATS4O95619 227 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 CREB3L3Q68CJ9 461 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 IFFO1Q0D2I5 559 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 IMPG2Q9BZV3 1241 aa16.37■□□□□ 0.21
TRIO-222ENST00000515144 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
TRIO-222ENST00000515144 EZRP15311 586 aaKnown RBP16.36■□□□□ 0.21
TRIO-222ENST00000515144 HLTFQ14527 1009 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRIO-222ENST00000515144 ZNF174Q15697 407 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 LEKR1Q6ZMV7 388 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 ZFYVE9O95405 1425 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 TNPO1Q92973 898 aaKnown RBP16.36■□□□□ 0.21
TRIO-222ENST00000515144 MFSD14BQ5SR56 506 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 DTHD1Q6ZMT9 781 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 USP40Q9NVE5 1235 aa16.36■□□□□ 0.21
TRIO-222ENST00000515144 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms