RNA–Protein interactions for RNA: ENST00000514962.5

CALCOCO2-224, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 765 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-224ENST00000514962 SMARCE1Q969G3 411 aa7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 JAKMIP1Q96N16 626 aaKnown RBP7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 MYCBPQ99417 103 aaPredicted RBP7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 CDK19Q9BWU1 502 aa7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 KIAA1468Q9P260 1216 aa7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 RRP15Q9Y3B9 282 aaKnown RBP7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 PLEKHG2Q9H7P9 1386 aa7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 MLH3Q9UHC1 1453 aa7.41□□□□□ -1.22
CALCOCO2-224ENST00000514962 ANKRD62A6NC57 917 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 GOLGA6L9A6NEM1 432 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 UNCXA6NJT0 531 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 MYO1BO43795 1136 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 GLRX3O76003 335 aaKnown RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 ACTN2P35609 894 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 MAGEA9P43362 315 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 RESTQ13127 1097 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 MAP2K5Q13163 448 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 SMC1AQ14683 1233 aaKnown RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 BRD3Q15059 726 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 TTC31Q49AM3 519 aaPredicted RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 TSHZ3Q63HK5 1081 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 E4F1Q66K89 784 aaPredicted RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 CC2D1AQ6P1N0 951 aaPredicted RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 C11orf57Q6ZUT1 292 aaPredicted RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 CDC37L1Q7L3B6 337 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 DHX40Q8IX18 779 aaKnown RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 NFATC2IPQ8NCF5 419 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 PGBD1Q96JS3 809 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 MPHOSPH8Q99549 860 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 NCAPGQ9BPX3 1015 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 STK31Q9BXU1 1019 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 IL25Q9H293 177 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 SNRKQ9NRH2 765 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 IGSF5Q9NSI5 407 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 TRMT1Q9NXH9 659 aaKnown RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 MKRN1Q9UHC7 482 aaKnown RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 USTQ9Y2C2 406 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 ZNF330Q9Y3S2 320 aaPredicted RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 MINK1Q8N4C8 1332 aaPredicted RBP7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 TMEM131LA2VDJ0 1609 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 ALKQ9UM73 1620 aa7.4□□□□□ -1.22
CALCOCO2-224ENST00000514962 C3P01024 1663 aa7.4□□□□□ -1.23
CALCOCO2-224ENST00000514962 PNMA6EA0A0J9YXQ4 647 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 FAM83GA6ND36 823 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 POLR3GO15318 223 aaPredicted RBP7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 ZSCAN12O43309 604 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 NR1I2O75469 434 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 TBC1D8O95759 1140 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 CPP00450 1065 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 CSB-PGBD3P0DP91 1061 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 SFPQP23246 707 aaKnown RBP eCLIP7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 SETQ01105 290 aaPredicted RBP7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 NECTIN1Q15223 517 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 SLC4A10Q6U841 1118 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 LEKR1Q6ZMV7 388 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 CCDC73Q6ZRK6 1079 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 SUGP1Q8IWZ8 645 aaKnown RBP7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 RHPN1Q8TCX5 695 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 SREK1Q8WXA9 508 aaKnown RBP7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 RABGGTAQ92696 567 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 CCDC102AQ96A19 550 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 TRERF1Q96PN7 1200 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 PRAM1Q96QH2 718 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 ARFGAP3Q9NP61 516 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 CABP1Q9NZU7 370 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 RCOR1Q9UKL0 485 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
CALCOCO2-224ENST00000514962 CEP170BQ9Y4F5 1589 aaPredicted RBP7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 ABCC6O95255 1503 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 ADCY9O60503 1353 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 NBPF26B4DH59 902 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 KINO60870 393 aaKnown RBP7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 PTPN5P54829 565 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 EVCP57679 992 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 FAM160A1Q05DH4 1040 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 TUBB2AQ13885 445 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 TSGA10IPQ3SY00 556 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 CCDC30Q5VVM6 783 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 CREB3L3Q68CJ9 461 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 NAA16Q6N069 864 aaPredicted RBP7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 PRPF40BQ6NWY9 871 aaKnown RBP7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 THSD4Q6ZMP0 1018 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 G2E3Q7L622 706 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 REXO1L1PQ8IX06 675 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 C10orf67Q8IYJ2 551 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 HNRNPLLQ8WVV9 542 aaKnown RBP7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 PPM1EQ8WY54 764 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 GPATCH3Q96I76 525 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 ZNF396Q96N95 335 aaPredicted RBP7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 TUBB2BQ9BVA1 445 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 FAM107BQ9H098 131 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 SLC52A1Q9NWF4 448 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 BABAM1Q9NWV8 329 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 HMG20BQ9P0W2 317 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 TPCN1Q9ULQ1 816 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 CHMP3Q9Y3E7 222 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 USP16Q9Y5T5 823 aa7.38□□□□□ -1.23
CALCOCO2-224ENST00000514962 IVNS1ABPQ9Y6Y0 642 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms