RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 EGFLAMQ63HQ2 1017 aa7.7□□□□□ -1.18
RFC1-216ENST00000514572 RAB44Q7Z6P3 723 aaPredicted RBP7.7□□□□□ -1.18
RFC1-216ENST00000514572 BHMTQ93088 406 aa7.7□□□□□ -1.18
RFC1-216ENST00000514572 MKL1Q969V6 931 aa7.7□□□□□ -1.18
RFC1-216ENST00000514572 NSUN5Q96P11 429 aaKnown RBP7.7□□□□□ -1.18
RFC1-216ENST00000514572 UBP1Q9NZI7 540 aa7.7□□□□□ -1.18
RFC1-216ENST00000514572 SOBPA7XYQ1 873 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 SNRPBP14678 240 aaKnown RBP7.69□□□□□ -1.18
RFC1-216ENST00000514572 ETFBP38117 255 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 FAM160A1Q05DH4 1040 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 BMS1Q14692 1282 aaKnown RBP7.69□□□□□ -1.18
RFC1-216ENST00000514572 TTBK2Q6IQ55 1244 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 ZNF662Q6ZS27 426 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 FAM196AQ6ZSG2 479 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 CCDC84Q86UT8 332 aaPredicted RBP7.69□□□□□ -1.18
RFC1-216ENST00000514572 TRIM42Q8IWZ5 723 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 CCDC155Q8N6L0 562 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 PBX4Q9BYU1 374 aa7.69□□□□□ -1.18
RFC1-216ENST00000514572 CDK11AQ9UQ88 783 aaPredicted RBP7.69□□□□□ -1.18
RFC1-216ENST00000514572 PDE2AO00408 941 aaPredicted RBP7.68□□□□□ -1.18
RFC1-216ENST00000514572 SSBP05455 408 aaKnown RBP eCLIP7.68□□□□□ -1.18
RFC1-216ENST00000514572 NFE2L2Q16236 605 aa7.68□□□□□ -1.18
RFC1-216ENST00000514572 TREML4Q6UXN2 200 aa7.68□□□□□ -1.18
RFC1-216ENST00000514572 GOLM1Q8NBJ4 401 aa7.68□□□□□ -1.18
RFC1-216ENST00000514572 RASSF4Q9H2L5 321 aa7.68□□□□□ -1.18
RFC1-216ENST00000514572 LOC102724428A0A0B4J2F2 783 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 ANKRD62A6NC57 917 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 K7ELQ4 463 aaPredicted RBP7.67□□□□□ -1.18
RFC1-216ENST00000514572 SIK1P57059 783 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 ATP11AP98196 1134 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 APOBRQ0VD83 1088 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 RAB33AQ14088 237 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 SNAP47Q5SQN1 464 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 RASIP1Q5U651 963 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 SHDQ96IW2 340 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 ROBO2Q9HCK4 1378 aa7.67□□□□□ -1.18
RFC1-216ENST00000514572 FAM221AA4D161 298 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 NCLP19338 710 aaKnown RBP7.66□□□□□ -1.18
RFC1-216ENST00000514572 FGFR3P22607 806 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 ITGA6P23229 1130 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
RFC1-216ENST00000514572 ADAMTSL4Q6UY14 1074 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 ANKS3Q6ZW76 656 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 TRIM47Q96LD4 638 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 POP1Q99575 1024 aaKnown RBP7.66□□□□□ -1.18
RFC1-216ENST00000514572 MUC3BQ9H195 1237 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 SENP2Q9HC62 589 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 SIRPGQ9P1W8 387 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 PRKAG3Q9UGI9 489 aa7.66□□□□□ -1.18
RFC1-216ENST00000514572 B3GALT4O96024 378 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 F13A1P00488 732 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 BMP6P22004 513 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 RASA3Q14644 834 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 SPACA7Q96KW9 195 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 MDFIQ99750 246 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 CLEC4MQ9H2X3 399 aaPredicted RBP7.65□□□□□ -1.18
RFC1-216ENST00000514572 TMEM39AQ9NV64 488 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 SOX13Q9UN79 622 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 MRVI1Q9Y6F6 885 aa7.65□□□□□ -1.18
RFC1-216ENST00000514572 SBNO2Q9Y2G9 1366 aa7.64□□□□□ -1.19
RFC1-216ENST00000514572 J3QW42 95 aa7.64□□□□□ -1.19
RFC1-216ENST00000514572 CDK11BP21127 795 aaKnown RBP7.64□□□□□ -1.19
RFC1-216ENST00000514572 TCEAL1Q15170 157 aa7.64□□□□□ -1.19
RFC1-216ENST00000514572 ZNF468Q5VIY5 522 aaPredicted RBP7.64□□□□□ -1.19
RFC1-216ENST00000514572 BNC2Q6ZN30 1099 aaPredicted RBP7.64□□□□□ -1.19
RFC1-216ENST00000514572 GATAD2BQ8WXI9 593 aa7.64□□□□□ -1.19
RFC1-216ENST00000514572 BSNDQ8WZ55 320 aa7.64□□□□□ -1.19
RFC1-216ENST00000514572 NKD1Q969G9 470 aa7.64□□□□□ -1.19
RFC1-216ENST00000514572 GTPBP3Q969Y2 492 aaKnown RBP7.64□□□□□ -1.19
RFC1-216ENST00000514572 GAL3ST3Q96A11 431 aa7.64□□□□□ -1.19
RFC1-216ENST00000514572 SRRTQ9BXP5 876 aaKnown RBP7.64□□□□□ -1.19
RFC1-216ENST00000514572 DNAJB12Q9NXW2 375 aaKnown RBP7.64□□□□□ -1.19
RFC1-216ENST00000514572 MRPL42Q9Y6G3 142 aaKnown RBP7.64□□□□□ -1.19
RFC1-216ENST00000514572 SIN3BO75182 1162 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 CILPO75339 1184 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 CTBSQ01459 385 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 MLLT1Q03111 559 aaPredicted RBP7.63□□□□□ -1.19
RFC1-216ENST00000514572 NEUROD1Q13562 356 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 PCSK7Q16549 785 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 LRP10Q7Z4F1 713 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 VN1R5Q7Z5H4 357 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 FBXO27Q8NI29 283 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 ASAP3Q8TDY4 903 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 HNRNPLLQ8WVV9 542 aaKnown RBP7.63□□□□□ -1.19
RFC1-216ENST00000514572 TNFRSF25Q93038 417 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 KIFC2Q96AC6 838 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 PLD4Q96BZ4 506 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 MRFAP1L1Q96HT8 127 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 GPN3Q9UHW5 284 aaPredicted RBP7.63□□□□□ -1.19
RFC1-216ENST00000514572 PPT2Q9UMR5 302 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 MSRB2Q9Y3D2 182 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 PCDHB5Q9Y5E4 795 aa7.63□□□□□ -1.19
RFC1-216ENST00000514572 ENPP3O14638 875 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 WFS1O76024 890 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 NME2P22392 152 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 GIPRP48546 466 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 MPP2Q14168 576 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 ZNF423Q2M1K9 1284 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 HFE2Q6ZVN8 426 aa7.62□□□□□ -1.19
RFC1-216ENST00000514572 FAM169BQ8N8A8 192 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms