RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 RUNDC1Q96C34 613 aa15.53■□□□□ 0.08
PTPN20-229ENST00000513756 SPEF2Q9C093 1822 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 DLL1O00548 723 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 KIF22Q14807 665 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 NBPF12Q5TAG4 269 aaPredicted RBP15.52■□□□□ 0.08
PTPN20-229ENST00000513756 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 OPTNQ96CV9 577 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 MPHOSPH8Q99549 860 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 VEZTQ9HBM0 779 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 CD209Q9NNX6 404 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 MBIPQ9NS73 344 aa15.52■□□□□ 0.08
PTPN20-229ENST00000513756 MYH3P11055 1940 aa15.52■□□□□ 0.07
PTPN20-229ENST00000513756 ECM29Q5VYK3 1845 aa15.52■□□□□ 0.07
PTPN20-229ENST00000513756 CLRN2A0PK11 232 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 GTF2A2P52657 109 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 CAP1Q01518 475 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 NEXNQ0ZGT2 675 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 TAF1CQ15572 869 aaPredicted RBP15.51■□□□□ 0.07
PTPN20-229ENST00000513756 CFAP100Q494V2 611 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 SLC17A8Q8NDX2 589 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 ELP3Q9H9T3 547 aa15.51■□□□□ 0.07
PTPN20-229ENST00000513756 TNFAIP1Q13829 316 aa15.5■□□□□ 0.07
PTPN20-229ENST00000513756 RALBP1Q15311 655 aa15.5■□□□□ 0.07
PTPN20-229ENST00000513756 DPF3Q92784 378 aa15.5■□□□□ 0.07
PTPN20-229ENST00000513756 MS4A4AQ96JQ5 239 aa15.5■□□□□ 0.07
PTPN20-229ENST00000513756 MAP3K2Q9Y2U5 619 aa15.5■□□□□ 0.07
PTPN20-229ENST00000513756 MYCP01106 439 aaPredicted RBP15.49■□□□□ 0.07
PTPN20-229ENST00000513756 GNRH1P01148 92 aa15.49■□□□□ 0.07
PTPN20-229ENST00000513756 KLRK1P26718 216 aa15.49■□□□□ 0.07
PTPN20-229ENST00000513756 FKBP1AP62942 108 aaKnown RBP15.49■□□□□ 0.07
PTPN20-229ENST00000513756 RASA3Q14644 834 aa15.49■□□□□ 0.07
PTPN20-229ENST00000513756 CCDC30Q5VVM6 783 aa15.49■□□□□ 0.07
PTPN20-229ENST00000513756 RBM27Q9P2N5 1060 aaKnown RBP15.49■□□□□ 0.07
PTPN20-229ENST00000513756 CCL15-CCL14A0A0B4J2E2 113 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 F8W031 263 aaPredicted RBP15.48■□□□□ 0.07
PTPN20-229ENST00000513756 ELL2O00472 640 aaPredicted RBP15.48■□□□□ 0.07
PTPN20-229ENST00000513756 IGKV5-2P06315 115 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 ITGA6P23229 1130 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 RBM5P52756 815 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPN20-229ENST00000513756 PRMT2P55345 433 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 CALD1Q05682 793 aaKnown RBP15.48■□□□□ 0.07
PTPN20-229ENST00000513756 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
PTPN20-229ENST00000513756 CCL15Q16663 113 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 KSR2Q6VAB6 950 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 CERS5Q8N5B7 392 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 BRI3BPQ8WY22 251 aa15.48■□□□□ 0.07
PTPN20-229ENST00000513756 PRMT6Q96LA8 375 aaPredicted RBP15.48■□□□□ 0.07
PTPN20-229ENST00000513756 RANBP2P49792 3224 aaKnown RBP15.47■□□□□ 0.07
PTPN20-229ENST00000513756 A0A0C4DFX4 3053 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 ZNF853P0CG23 659 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 GNAI1P63096 354 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 CHRNDQ07001 517 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 ZNF804AQ7Z570 1209 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 NKX2-3Q8TAU0 364 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 SH3TC2Q8TF17 1288 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 PCDHAC2Q9Y5I4 1007 aa15.47■□□□□ 0.07
PTPN20-229ENST00000513756 PI4KAP2A4QPH2 592 aa15.46■□□□□ 0.07
PTPN20-229ENST00000513756 IL1R1P14778 569 aa15.46■□□□□ 0.07
PTPN20-229ENST00000513756 C15orf52Q6ZUT6 534 aaKnown RBP15.46■□□□□ 0.07
PTPN20-229ENST00000513756 PI4KAP1Q8N8J0 262 aa15.46■□□□□ 0.07
PTPN20-229ENST00000513756 HTATIP2Q9BUP3 242 aa15.46■□□□□ 0.07
PTPN20-229ENST00000513756 ZCCHC17Q9NP64 241 aaKnown RBP15.46■□□□□ 0.07
PTPN20-229ENST00000513756 CSADQ9Y600 493 aa15.46■□□□□ 0.07
PTPN20-229ENST00000513756 H7C1W4 665 aa15.45■□□□□ 0.06
PTPN20-229ENST00000513756 TLR2O60603 784 aa15.45■□□□□ 0.06
PTPN20-229ENST00000513756 MAP3K9P80192 1104 aa15.45■□□□□ 0.06
PTPN20-229ENST00000513756 LACTBP83111 547 aaPredicted RBP15.45■□□□□ 0.06
PTPN20-229ENST00000513756 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.45■□□□□ 0.06
PTPN20-229ENST00000513756 UBE3BQ7Z3V4 1068 aa15.45■□□□□ 0.06
PTPN20-229ENST00000513756 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
PTPN20-229ENST00000513756 PLA2G12BQ9BX93 195 aa15.45■□□□□ 0.06
PTPN20-229ENST00000513756 NR2E3Q9Y5X4 410 aa15.45■□□□□ 0.06
PTPN20-229ENST00000513756 NEURL1BA8MQ27 555 aa15.44■□□□□ 0.06
PTPN20-229ENST00000513756 CETPP11597 493 aa15.44■□□□□ 0.06
PTPN20-229ENST00000513756 CWF19L2Q2TBE0 894 aaKnown RBP15.44■□□□□ 0.06
PTPN20-229ENST00000513756 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
PTPN20-229ENST00000513756 ZNF70Q9UC06 446 aaPredicted RBP15.44■□□□□ 0.06
PTPN20-229ENST00000513756 OTOFQ9HC10 1997 aa15.44■□□□□ 0.06
PTPN20-229ENST00000513756 ANKRD18BA2A2Z9 1011 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 CSF1RP07333 972 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 HOXD10P28358 340 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 TNNI2P48788 182 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 VGLL4Q14135 290 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 HELBQ8NG08 1087 aaPredicted RBP15.43■□□□□ 0.06
PTPN20-229ENST00000513756 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 ARHGAP39Q9C0H5 1083 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 SERPINA10Q9UK55 444 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 IRS2Q9Y4H2 1338 aa15.43■□□□□ 0.06
PTPN20-229ENST00000513756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.42■□□□□ 0.06
PTPN20-229ENST00000513756 STK31Q9BXU1 1019 aa15.42■□□□□ 0.06
PTPN20-229ENST00000513756 AOX1Q06278 1338 aa15.42■□□□□ 0.06
PTPN20-229ENST00000513756 COL6A3P12111 3177 aa15.41■□□□□ 0.06
PTPN20-229ENST00000513756 A0A1W2PPC1 479 aa15.41■□□□□ 0.06
PTPN20-229ENST00000513756 TAF5LO75529 589 aa15.41■□□□□ 0.06
PTPN20-229ENST00000513756 SHISA4Q96DD7 197 aa15.41■□□□□ 0.06
PTPN20-229ENST00000513756 TEPSINQ96N21 525 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms