RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 USP2O75604 605 aaPredicted RBP15.71■□□□□ 0.11
SFXN1-210ENST00000513725 FMNL1O95466 1100 aaPredicted RBP15.71■□□□□ 0.11
SFXN1-210ENST00000513725 SYN1P17600 705 aa15.71■□□□□ 0.11
SFXN1-210ENST00000513725 OSBPP22059 807 aa15.71■□□□□ 0.11
SFXN1-210ENST00000513725 DACT2Q5SW24 774 aa15.71■□□□□ 0.11
SFXN1-210ENST00000513725 PHACTR3Q96KR7 559 aa15.71■□□□□ 0.11
SFXN1-210ENST00000513725 CDX2Q99626 313 aaPredicted RBP15.71■□□□□ 0.11
SFXN1-210ENST00000513725 MXD3Q9BW11 206 aa15.71■□□□□ 0.11
SFXN1-210ENST00000513725 SLAIN1Q8ND83 568 aa15.7■□□□□ 0.1
SFXN1-210ENST00000513725 FBXW7Q969H0 707 aa15.7■□□□□ 0.1
SFXN1-210ENST00000513725 ZCCHC17Q9NP64 241 aaKnown RBP15.7■□□□□ 0.1
SFXN1-210ENST00000513725 MIS18AQ9NYP9 233 aa15.7■□□□□ 0.1
SFXN1-210ENST00000513725 LAMA2P24043 3122 aaKnown RBP15.7■□□□□ 0.1
SFXN1-210ENST00000513725 ARIH1Q9Y4X5 557 aaPredicted RBP15.69■□□□□ 0.1
SFXN1-210ENST00000513725 DCTN1Q14203 1278 aa15.68■□□□□ 0.1
SFXN1-210ENST00000513725 STRIP1Q5VSL9 837 aa15.68■□□□□ 0.1
SFXN1-210ENST00000513725 ZBED3Q96IU2 234 aaPredicted RBP15.68■□□□□ 0.1
SFXN1-210ENST00000513725 DEFB118Q96PH6 123 aa15.68■□□□□ 0.1
SFXN1-210ENST00000513725 CTGFP29279 349 aa15.67■□□□□ 0.1
SFXN1-210ENST00000513725 PRKAR2BP31323 418 aa15.67■□□□□ 0.1
SFXN1-210ENST00000513725 NBPF12Q5TAG4 269 aaPredicted RBP15.67■□□□□ 0.1
SFXN1-210ENST00000513725 PNISRQ8TF01 805 aaKnown RBP15.67■□□□□ 0.1
SFXN1-210ENST00000513725 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
SFXN1-210ENST00000513725 THUMPD2Q9BTF0 503 aaKnown RBP15.67■□□□□ 0.1
SFXN1-210ENST00000513725 HTATSF1O43719 755 aaKnown RBP15.66■□□□□ 0.1
SFXN1-210ENST00000513725 C17orf99Q6UX52 265 aa15.66■□□□□ 0.1
SFXN1-210ENST00000513725 COL4A1P02462 1669 aa15.66■□□□□ 0.1
SFXN1-210ENST00000513725 ZNF804BA4D1E1 1349 aa15.66■□□□□ 0.1
SFXN1-210ENST00000513725 XDHP47989 1333 aa15.66■□□□□ 0.1
SFXN1-210ENST00000513725 CETPP11597 493 aa15.65■□□□□ 0.1
SFXN1-210ENST00000513725 ATP2B4P23634 1241 aa15.65■□□□□ 0.1
SFXN1-210ENST00000513725 EIF4A1P60842 406 aaKnown RBP15.65■□□□□ 0.1
SFXN1-210ENST00000513725 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
SFXN1-210ENST00000513725 KIAA0825Q8IV33 1275 aa15.65■□□□□ 0.1
SFXN1-210ENST00000513725 CRISPLD2Q9H0B8 497 aa15.65■□□□□ 0.1
SFXN1-210ENST00000513725 MYO1BO43795 1136 aa15.64■□□□□ 0.09
SFXN1-210ENST00000513725 PRKCZQ05513 592 aa15.64■□□□□ 0.09
SFXN1-210ENST00000513725 LRP10Q7Z4F1 713 aa15.64■□□□□ 0.09
SFXN1-210ENST00000513725 ANKLE1Q8NAG6 615 aa15.64■□□□□ 0.09
SFXN1-210ENST00000513725 DIS3LQ8TF46 1054 aaKnown RBP15.64■□□□□ 0.09
SFXN1-210ENST00000513725 COL2A1P02458 1487 aaPredicted RBP15.64■□□□□ 0.09
SFXN1-210ENST00000513725 ADGRA2Q96PE1 1338 aa15.64■□□□□ 0.09
SFXN1-210ENST00000513725 BTBD19C9JJ37 291 aa15.63■□□□□ 0.09
SFXN1-210ENST00000513725 FOSL2P15408 326 aa15.63■□□□□ 0.09
SFXN1-210ENST00000513725 FAM89AQ96GI7 184 aa15.63■□□□□ 0.09
SFXN1-210ENST00000513725 PAK6Q9NQU5 681 aaPredicted RBP15.63■□□□□ 0.09
SFXN1-210ENST00000513725 CPA4Q9UI42 421 aa15.63■□□□□ 0.09
SFXN1-210ENST00000513725 HCN4Q9Y3Q4 1203 aa15.63■□□□□ 0.09
SFXN1-210ENST00000513725 OTOFQ9HC10 1997 aa15.63■□□□□ 0.09
SFXN1-210ENST00000513725 PIEZO1Q92508 2521 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 ADCY3O60266 1144 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 INHAP05111 366 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 AMER1Q5JTC6 1135 aaPredicted RBP15.62■□□□□ 0.09
SFXN1-210ENST00000513725 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.62■□□□□ 0.09
SFXN1-210ENST00000513725 MYLIPQ8WY64 445 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 ZNF428Q96B54 188 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 NBPF3Q9H094 633 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 RSPH6AQ9H0K4 717 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 SEMA6BQ9H3T3 888 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 CSADQ9Y600 493 aa15.62■□□□□ 0.09
SFXN1-210ENST00000513725 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
SFXN1-210ENST00000513725 FCGRTP55899 365 aa15.61■□□□□ 0.09
SFXN1-210ENST00000513725 AIMP1Q12904 312 aaKnown RBP15.61■□□□□ 0.09
SFXN1-210ENST00000513725 VGLL4Q14135 290 aa15.61■□□□□ 0.09
SFXN1-210ENST00000513725 TTLL5Q6EMB2 1281 aa15.61■□□□□ 0.09
SFXN1-210ENST00000513725 C1QTNF1Q9BXJ1 281 aa15.61■□□□□ 0.09
SFXN1-210ENST00000513725 VEZTQ9HBM0 779 aa15.61■□□□□ 0.09
SFXN1-210ENST00000513725 MED23Q9ULK4 1368 aa15.61■□□□□ 0.09
SFXN1-210ENST00000513725 CLRN2A0PK11 232 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 RASA3Q14644 834 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 PDIA6Q15084 440 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 COPS6Q7L5N1 327 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 MTMR14Q8NCE2 650 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 SEC31BQ9NQW1 1179 aa15.6■□□□□ 0.09
SFXN1-210ENST00000513725 CDH23Q9H251 3354 aa15.59■□□□□ 0.09
SFXN1-210ENST00000513725 MDM2Q00987 491 aaPredicted RBP15.59■□□□□ 0.09
SFXN1-210ENST00000513725 SNAPC2Q13487 334 aa15.59■□□□□ 0.09
SFXN1-210ENST00000513725 PXYLP1Q8TE99 480 aa15.59■□□□□ 0.09
SFXN1-210ENST00000513725 C11orf49Q9H6J7 331 aa15.59■□□□□ 0.09
SFXN1-210ENST00000513725 ECM29Q5VYK3 1845 aa15.59■□□□□ 0.09
SFXN1-210ENST00000513725 IRS4O14654 1257 aaPredicted RBP15.58■□□□□ 0.08
SFXN1-210ENST00000513725 ANXA1P04083 346 aa15.58■□□□□ 0.08
SFXN1-210ENST00000513725 EIF2S2P20042 333 aaKnown RBP15.58■□□□□ 0.08
SFXN1-210ENST00000513725 PROSER3Q2NL68 480 aa15.58■□□□□ 0.08
SFXN1-210ENST00000513725 RTL5Q5HYW3 569 aaPredicted RBP15.58■□□□□ 0.08
SFXN1-210ENST00000513725 XAGE3Q8WTP9 111 aa15.58■□□□□ 0.08
SFXN1-210ENST00000513725 GABRQQ9UN88 632 aa15.58■□□□□ 0.08
SFXN1-210ENST00000513725 SPDYE5A6NIY4 337 aa15.57■□□□□ 0.08
SFXN1-210ENST00000513725 ELNP15502 786 aa15.57■□□□□ 0.08
SFXN1-210ENST00000513725 HSP90B1P14625 803 aaKnown RBP15.56■□□□□ 0.08
SFXN1-210ENST00000513725 TNFAIP1Q13829 316 aa15.56■□□□□ 0.08
SFXN1-210ENST00000513725 ERO1BQ86YB8 467 aa15.56■□□□□ 0.08
SFXN1-210ENST00000513725 BDP1A6H8Y1 2624 aa15.56■□□□□ 0.08
SFXN1-210ENST00000513725 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
SFXN1-210ENST00000513725 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
SFXN1-210ENST00000513725 FLT3LGP49771 235 aa15.55■□□□□ 0.08
SFXN1-210ENST00000513725 EIF4G2P78344 907 aaKnown RBP eCLIP15.55■□□□□ 0.08
SFXN1-210ENST00000513725 GTF2IP78347 998 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms