RNA–Protein interactions for RNA: ENST00000513457.5

LDB2-215, Transcript of LIM domain binding 2, human

TSL 5

Gene LDB2, Length 530 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDB2-215	ENST00000513457	TSHZ2	Q9NRE2	1034 aa		7.54	□□□□□ -1.2
LDB2-215	ENST00000513457	ZNF277	Q9NRM2	450 aa	Predicted RBP	7.54	□□□□□ -1.2
LDB2-215	ENST00000513457	DAXX	Q9UER7	740 aa	Predicted RBP	7.54	□□□□□ -1.2
LDB2-215	ENST00000513457	MKRN1	Q9UHC7	482 aa	Known RBP	7.54	□□□□□ -1.2
LDB2-215	ENST00000513457	UBN2	Q6ZU65	1347 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	RASSF10	A6NK89	507 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	FAM177B	A6PVY3	158 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	NTSR2	O95665	410 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	HOXA10	P31260	410 aa	Predicted RBP	7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	EIF6	P56537	245 aa	Known RBP	7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	LMOD3	Q0VAK6	560 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	HLF	Q16534	295 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	TMX4	Q9H1E5	349 aa	Predicted RBP	7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	PRDM10	Q9NQV6	1147 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	TRPM7	Q96QT4	1865 aa		7.53	□□□□□ -1.2
LDB2-215	ENST00000513457	DUOX1	Q9NRD9	1551 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	GCGR	P47871	477 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	CTCF	P49711	727 aa	Predicted RBP	7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	EIF4A1	P60842	406 aa	Known RBP	7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	HIC1	Q14526	733 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	MSS51	Q4VC12	460 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	GIGYF2	Q6Y7W6	1299 aa	Known RBP	7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	PPP1R42	Q7Z4L9	355 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	NIM1K	Q8IY84	436 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	SYNE4	Q8N205	404 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	RBM17	Q96I25	401 aa	Known RBP	7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	CRAMP1	Q96RY5	1269 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	PLEKHF1	Q96S99	279 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	VPS33B	Q9H267	617 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	ZBTB3	Q9H5J0	574 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	BABAM1	Q9NWV8	329 aa		7.52	□□□□□ -1.21
LDB2-215	ENST00000513457	FOXN1	O15353	648 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	MYL6B	P14649	208 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	HSP90AB3P	Q58FF7	597 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	OLFM4	Q6UX06	510 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	TTLL7	Q6ZT98	887 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	NUTM1	Q86Y26	1132 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	LARGE2	Q8N3Y3	721 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	SUPT20H	Q8NEM7	779 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	SENP2	Q9HC62	589 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	TSPYL4	Q9UJ04	414 aa		7.51	□□□□□ -1.21
LDB2-215	ENST00000513457	GPT	P24298	496 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	ECE1	P42892	770 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	VEGFB	P49765	207 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	SCNN1D	P51172	638 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	MAP2K1	Q02750	393 aa	Predicted RBP	7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	RBM26	Q5T8P6	1007 aa	Known RBP	7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	USP50	Q70EL3	339 aa	Predicted RBP	7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	TMC4	Q7Z404	712 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	ZNF34	Q8IZ26	560 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	CNTROB	Q8N137	903 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	NLRP3	Q96P20	1036 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	MIS18A	Q9NYP9	233 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	ABT1	Q9ULW3	272 aa	Known RBP	7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	RRP7A	Q9Y3A4	280 aa	Known RBP	7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	SALL2	Q9Y467	1007 aa	Predicted RBP	7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	ABCC4	O15439	1325 aa		7.5	□□□□□ -1.21
LDB2-215	ENST00000513457	PPIP5K2	O43314	1243 aa		7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	DEFB115	Q30KQ5	88 aa		7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	SUSD4	Q5VX71	490 aa		7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	MAP1S	Q66K74	1059 aa	Predicted RBP	7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	NGEF	Q8N5V2	710 aa		7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	PHOX2B	Q99453	314 aa		7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	UTP14A	Q9BVJ6	771 aa	Known RBP	7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	ATP6V0A2	Q9Y487	856 aa		7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	GJA3	Q9Y6H8	435 aa		7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	WDR33	Q9C0J8	1336 aa	Known RBP	7.49	□□□□□ -1.21
LDB2-215	ENST00000513457	RALBP1	Q15311	655 aa		7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	LRP10	Q7Z4F1	713 aa		7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	THUMPD2	Q9BTF0	503 aa	Known RBP	7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	BEGAIN	Q9BUH8	593 aa		7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	RTFDC1	Q9BY42	306 aa	Predicted RBP	7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	ADARB2	Q9NS39	739 aa	Known RBP	7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	GPRC5D	Q9NZD1	345 aa		7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	PCNT	O95613	3336 aa		7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	SH3TC1	Q8TE82	1336 aa		7.48	□□□□□ -1.21
LDB2-215	ENST00000513457	ZNF609	O15014	1411 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	CA12	O43570	354 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	HOXB7	P09629	217 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	HSPA8	P11142	646 aa	Known RBP	7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	GMPR	P36959	345 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	KIAA2012	Q0VF49	1180 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	GRAP	Q13588	217 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	AOC3	Q16853	763 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	SLC10A5	Q5PT55	438 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	DPP8	Q6V1X1	898 aa	Predicted RBP	7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	GRAPL	Q8TC17	118 aa	Predicted RBP	7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	KIFC2	Q96AC6	838 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	HHIPL1	Q96JK4	782 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	CAPNS2	Q96L46	248 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	ZNRF3	Q9ULT6	936 aa		7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	MYBBP1A	Q9BQG0	1328 aa	Known RBP	7.47	□□□□□ -1.21
LDB2-215	ENST00000513457	PSME4	Q14997	1843 aa		7.46	□□□□□ -1.21
LDB2-215	ENST00000513457	GPR37	O15354	613 aa		7.46	□□□□□ -1.22
LDB2-215	ENST00000513457	BBOX1	O75936	387 aa		7.46	□□□□□ -1.22
LDB2-215	ENST00000513457	BMP1	P13497	986 aa		7.46	□□□□□ -1.22
LDB2-215	ENST00000513457	LOR	P23490	312 aa	Predicted RBP	7.46	□□□□□ -1.22
LDB2-215	ENST00000513457	EPS15	P42566	896 aa		7.46	□□□□□ -1.22
LDB2-215	ENST00000513457	MMP16	P51512	607 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms