RNA–Protein interactions for RNA: ENST00000512726.1

RFC1-214, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-214ENST00000512726 ASAP3Q8TDY4 903 aa10.58□□□□□ -0.72
RFC1-214ENST00000512726 HNRNPLLQ8WVV9 542 aaKnown RBP10.58□□□□□ -0.72
RFC1-214ENST00000512726 GPN3Q9UHW5 284 aaPredicted RBP10.58□□□□□ -0.72
RFC1-214ENST00000512726 SAMM50Q9Y512 469 aa10.58□□□□□ -0.72
RFC1-214ENST00000512726 METTL12A8MUP2 240 aa10.57□□□□□ -0.72
RFC1-214ENST00000512726 PDE2AO00408 941 aaPredicted RBP10.57□□□□□ -0.72
RFC1-214ENST00000512726 THBS1P07996 1170 aa10.57□□□□□ -0.72
RFC1-214ENST00000512726 TNNI3KQ59H18 835 aa10.57□□□□□ -0.72
RFC1-214ENST00000512726 CCDC84Q86UT8 332 aaPredicted RBP10.57□□□□□ -0.72
RFC1-214ENST00000512726 TRIM42Q8IWZ5 723 aa10.57□□□□□ -0.72
RFC1-214ENST00000512726 ZNF576Q9H609 170 aa10.57□□□□□ -0.72
RFC1-214ENST00000512726 BNIP3LO60238 219 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 CRKP46108 304 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 SMCPP49901 116 aaPredicted RBP10.56□□□□□ -0.72
RFC1-214ENST00000512726 PPP2R3AQ06190 1150 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
RFC1-214ENST00000512726 GRIN2CQ14957 1233 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 SEZ6Q53EL9 994 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 LRP10Q7Z4F1 713 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 SLC30A3Q99726 388 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 TMEM39AQ9NV64 488 aa10.56□□□□□ -0.72
RFC1-214ENST00000512726 NFKBIEO00221 500 aa10.55□□□□□ -0.72
RFC1-214ENST00000512726 DEPDC7Q96QD5 511 aa10.55□□□□□ -0.72
RFC1-214ENST00000512726 HHIPQ96QV1 700 aa10.55□□□□□ -0.72
RFC1-214ENST00000512726 PBX4Q9BYU1 374 aa10.55□□□□□ -0.72
RFC1-214ENST00000512726 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
RFC1-214ENST00000512726 SNTG2Q9NY99 539 aa10.55□□□□□ -0.72
RFC1-214ENST00000512726 LOC102724428A0A0B4J2F2 783 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 PAGE1O75459 146 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 SIK1P57059 783 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 GPLD1P80108 840 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 RAB44Q7Z6P3 723 aaPredicted RBP10.54□□□□□ -0.72
RFC1-214ENST00000512726 SHDQ96IW2 340 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 CRBNQ96SW2 442 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 LRRC3Q9BY71 257 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 RBSNQ9H1K0 784 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 MIR1-1HGQ9H1L0 117 aa10.54□□□□□ -0.72
RFC1-214ENST00000512726 ENPP3O14638 875 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 SMAD7O15105 426 aaKnown RBP10.53□□□□□ -0.72
RFC1-214ENST00000512726 F13A1P00488 732 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 GHRHP01286 108 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 CD33P20138 364 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 EIF6P56537 245 aaKnown RBP10.53□□□□□ -0.72
RFC1-214ENST00000512726 FAAP100Q0VG06 881 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 PCSK7Q16549 785 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 CWF19L2Q2TBE0 894 aaKnown RBP10.53□□□□□ -0.72
RFC1-214ENST00000512726 RNF187Q5TA31 235 aaPredicted RBP10.53□□□□□ -0.72
RFC1-214ENST00000512726 CCDC81Q6ZN84 652 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 TRIM22Q8IYM9 498 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 TRPM4Q8TD43 1214 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 GATAD2BQ8WXI9 593 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 ABHD17AQ96GS6 310 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 ATXN7L1Q9ULK2 861 aaPredicted RBP10.53□□□□□ -0.72
RFC1-214ENST00000512726 PPT2Q9UMR5 302 aa10.53□□□□□ -0.72
RFC1-214ENST00000512726 AXIN1O15169 862 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 TLR3O15455 904 aaKnown RBP10.52□□□□□ -0.73
RFC1-214ENST00000512726 MCM4P33991 863 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 ZNF165P49910 485 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 PTSQ03393 145 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 RASA3Q14644 834 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 BNC2Q6ZN30 1099 aaPredicted RBP10.52□□□□□ -0.73
RFC1-214ENST00000512726 GMCL1Q96IK5 515 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 RNPC3Q96LT9 517 aaKnown RBP10.52□□□□□ -0.73
RFC1-214ENST00000512726 FERD3LQ96RJ6 166 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 RASSF4Q9H2L5 321 aa10.52□□□□□ -0.73
RFC1-214ENST00000512726 SLC35F4A4IF30 521 aa10.51□□□□□ -0.73
RFC1-214ENST00000512726 IBSPP21815 317 aaPredicted RBP10.51□□□□□ -0.73
RFC1-214ENST00000512726 MPP2Q14168 576 aa10.51□□□□□ -0.73
RFC1-214ENST00000512726 DBN1Q16643 649 aa10.51□□□□□ -0.73
RFC1-214ENST00000512726 PTPROQ16827 1216 aa10.51□□□□□ -0.73
RFC1-214ENST00000512726 FAM182BQ5T319 152 aa10.51□□□□□ -0.73
RFC1-214ENST00000512726 JARID2Q92833 1246 aaPredicted RBP10.51□□□□□ -0.73
RFC1-214ENST00000512726 CLEC4MQ9H2X3 399 aaPredicted RBP10.51□□□□□ -0.73
RFC1-214ENST00000512726 CYP8B1Q9UNU6 501 aa10.51□□□□□ -0.73
RFC1-214ENST00000512726 PHF24Q9UPV7 400 aa10.51□□□□□ -0.73
RFC1-214ENST00000512726 J3QW42 95 aa10.5□□□□□ -0.73
RFC1-214ENST00000512726 SMNDC1O75940 238 aaKnown RBP eCLIP10.5□□□□□ -0.73
RFC1-214ENST00000512726 MLLT1Q03111 559 aaPredicted RBP10.5□□□□□ -0.73
RFC1-214ENST00000512726 LRRC14Q15048 493 aa10.5□□□□□ -0.73
RFC1-214ENST00000512726 FBXW10Q5XX13 1052 aa10.5□□□□□ -0.73
RFC1-214ENST00000512726 OR6P1Q8NGX9 317 aa10.5□□□□□ -0.73
RFC1-214ENST00000512726 BSNDQ8WZ55 320 aa10.5□□□□□ -0.73
RFC1-214ENST00000512726 MUC3BQ9H195 1237 aa10.5□□□□□ -0.73
RFC1-214ENST00000512726 HCN2Q9UL51 889 aa10.5□□□□□ -0.73
RFC1-214ENST00000512726 CCDC85CA6NKD9 419 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 NME2P22392 152 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 GIPRP48546 466 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 ZNF157P51786 506 aaPredicted RBP10.49□□□□□ -0.73
RFC1-214ENST00000512726 CHMP4BP1P59074 171 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 ATP11AP98196 1134 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 FBXO27Q8NI29 283 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 CCDC113Q9H0I3 377 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 PRR12Q9ULL5 1215 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 PCDHB5Q9Y5E4 795 aa10.49□□□□□ -0.73
RFC1-214ENST00000512726 hCG_2014768A0A024R1R8 64 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 FAM221AA4D161 298 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 FAM221BA6H8Z2 402 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 ZBTB42B2RXF5 422 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 DGAT1O75907 488 aa10.48□□□□□ -0.73
RFC1-214ENST00000512726 BPNT1O95861 308 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms