RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 C9orf78Q9NZ63 289 aaPredicted RBP11.54□□□□□ -0.56
MSH3-203ENST00000512531 RASSF10A6NK89 507 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 FOXN1O15353 648 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 EPB41L2O43491 1005 aaKnown RBP11.53□□□□□ -0.56
MSH3-203ENST00000512531 GABBR2O75899 941 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
MSH3-203ENST00000512531 RABEP1Q15276 862 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 KSR2Q6VAB6 950 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 SYNE4Q8N205 404 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 SLAIN1Q8ND83 568 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 AIDAQ96BJ3 306 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 KIF1BPQ96EK5 621 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.53□□□□□ -0.56
MSH3-203ENST00000512531 ZNF277Q9NRM2 450 aaPredicted RBP11.53□□□□□ -0.56
MSH3-203ENST00000512531 POLR3EQ9NVU0 708 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 CHPF2Q9P2E5 772 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 ZNF541Q9H0D2 1346 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 CACNA1SQ13698 1873 aa11.53□□□□□ -0.56
MSH3-203ENST00000512531 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 ERC2O15083 957 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 ST18O60284 1047 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 VEGFBP49765 207 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 OS9Q13438 667 aaPredicted RBP11.52□□□□□ -0.57
MSH3-203ENST00000512531 NFKBIBQ15653 356 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 JDP2Q8WYK2 163 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 VPS33BQ9H267 617 aa11.52□□□□□ -0.57
MSH3-203ENST00000512531 DDX21Q9NR30 783 aaKnown RBP eCLIP11.52□□□□□ -0.57
MSH3-203ENST00000512531 LRRFIP2Q9Y608 721 aaKnown RBP11.52□□□□□ -0.57
MSH3-203ENST00000512531 MX1P20591 662 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 GTF2E1P29083 439 aaPredicted RBP11.51□□□□□ -0.57
MSH3-203ENST00000512531 PIP4K2AP48426 406 aaPredicted RBP11.51□□□□□ -0.57
MSH3-203ENST00000512531 SLC4A3P48751 1232 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 MAP2K1Q02750 393 aaPredicted RBP11.51□□□□□ -0.57
MSH3-203ENST00000512531 DEFB115Q30KQ5 88 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 MYSM1Q5VVJ2 828 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 CNTROBQ8N137 903 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 ADGRG1Q9Y653 693 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 ERBB4Q15303 1308 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 MAP3K15Q6ZN16 1313 aa11.51□□□□□ -0.57
MSH3-203ENST00000512531 PI4KAP2A4QPH2 592 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 MCM2P49736 904 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 PDE1AP54750 535 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 EIF6P56537 245 aaKnown RBP11.5□□□□□ -0.57
MSH3-203ENST00000512531 HLFQ16534 295 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 EAPPQ56P03 285 aaPredicted RBP11.5□□□□□ -0.57
MSH3-203ENST00000512531 TYW1BQ6NUM6 668 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 RIC3Q7Z5B4 369 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 PI4KAP1Q8N8J0 262 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 TTC13Q8NBP0 860 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 LINS1Q8NG48 757 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 SSH3Q8TE77 659 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 CRAMP1Q96RY5 1269 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 PCDHGA4Q9Y5G9 962 aa11.5□□□□□ -0.57
MSH3-203ENST00000512531 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
MSH3-203ENST00000512531 GOLGA6L22H0YM25 854 aa11.49□□□□□ -0.57
MSH3-203ENST00000512531 SRGAP3O43295 1099 aa11.49□□□□□ -0.57
MSH3-203ENST00000512531 SURF6O75683 361 aaKnown RBP11.49□□□□□ -0.57
MSH3-203ENST00000512531 DEKP35659 375 aaKnown RBP11.49□□□□□ -0.57
MSH3-203ENST00000512531 BEND3Q5T5X7 828 aa11.49□□□□□ -0.57
MSH3-203ENST00000512531 PXYLP1Q8TE99 480 aa11.49□□□□□ -0.57
MSH3-203ENST00000512531 GBP4Q96PP9 640 aa11.49□□□□□ -0.57
MSH3-203ENST00000512531 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
MSH3-203ENST00000512531 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 LMOD1P29536 600 aaPredicted RBP11.48□□□□□ -0.57
MSH3-203ENST00000512531 PARP10Q53GL7 1025 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 KIF6Q6ZMV9 814 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 USP50Q70EL3 339 aaPredicted RBP11.48□□□□□ -0.57
MSH3-203ENST00000512531 ZNF34Q8IZ26 560 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 CLASRPQ8N2M8 674 aaKnown RBP11.48□□□□□ -0.57
MSH3-203ENST00000512531 RUFY2Q8WXA3 655 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 RPGRQ92834 1020 aaKnown RBP11.48□□□□□ -0.57
MSH3-203ENST00000512531 RBM17Q96I25 401 aaKnown RBP11.48□□□□□ -0.57
MSH3-203ENST00000512531 SLKQ9H2G2 1235 aaPredicted RBP11.48□□□□□ -0.57
MSH3-203ENST00000512531 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
MSH3-203ENST00000512531 STAP2Q9UGK3 403 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 MAP3K2Q9Y2U5 619 aa11.48□□□□□ -0.57
MSH3-203ENST00000512531 NUP98P52948 1817 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 ABCC12Q96J65 1359 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 TTC41PQ6P2S7 1318 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 WDR33Q9C0J8 1336 aaKnown RBP11.47□□□□□ -0.57
MSH3-203ENST00000512531 K7ELQ4 463 aaPredicted RBP11.47□□□□□ -0.57
MSH3-203ENST00000512531 HIP1O00291 1037 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 GSPT1P15170 499 aaKnown RBP11.47□□□□□ -0.57
MSH3-203ENST00000512531 SDSP20132 328 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 ECE1P42892 770 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 MTX1Q13505 466 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 SLC10A5Q5PT55 438 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 MAP1SQ66K74 1059 aaPredicted RBP11.47□□□□□ -0.57
MSH3-203ENST00000512531 OLFM4Q6UX06 510 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 PPP1R42Q7Z4L9 355 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 BCL11AQ9H165 835 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 EXOC6BQ9Y2D4 811 aa11.47□□□□□ -0.57
MSH3-203ENST00000512531 FAM177BA6PVY3 158 aa11.46□□□□□ -0.57
MSH3-203ENST00000512531 GRM8O00222 908 aa11.46□□□□□ -0.57
MSH3-203ENST00000512531 GLRX3O76003 335 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms