RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-216ENST00000512146 NSUN7Q8NE18 718 aaKnown RBP17.53■□□□□ 0.4
SNCAIP-216ENST00000512146 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
SNCAIP-216ENST00000512146 LAMA4Q16363 1823 aa17.53■□□□□ 0.4
SNCAIP-216ENST00000512146 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 CTDNEP1O95476 244 aa17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 PDIA3P30101 505 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 KRT85P78386 507 aa17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 APOBRQ0VD83 1088 aa17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 CCDC173Q0VFZ6 552 aa17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 MB21D2Q8IYB1 491 aaPredicted RBP17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 SPATA5Q8NB90 893 aa17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 SALL1Q9NSC2 1324 aa17.52■□□□□ 0.4
SNCAIP-216ENST00000512146 HMGN5P82970 282 aaKnown RBP17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 RASGRF1Q13972 1273 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 CCDC183Q5T5S1 534 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 TCHHQ07283 1943 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 LETM1O95202 739 aaPredicted RBP17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 ALX1Q15699 326 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 ZMYM6O95789 1325 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 ZNF532Q9HCE3 1301 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 MYH7P12883 1935 aa17.51■□□□□ 0.39
SNCAIP-216ENST00000512146 ZNF213O14771 459 aa17.5■□□□□ 0.39
SNCAIP-216ENST00000512146 IDH1O75874 414 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-216ENST00000512146 RESTQ13127 1097 aa17.5■□□□□ 0.39
SNCAIP-216ENST00000512146 NAA16Q6N069 864 aaPredicted RBP17.5■□□□□ 0.39
SNCAIP-216ENST00000512146 CDC5LQ99459 802 aaKnown RBP17.5■□□□□ 0.39
SNCAIP-216ENST00000512146 WWC3Q9ULE0 1092 aa17.5■□□□□ 0.39
SNCAIP-216ENST00000512146 SPATA31A6Q5VVP1 1343 aa17.5■□□□□ 0.39
SNCAIP-216ENST00000512146 MCM5P33992 734 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 FERMT3Q86UX7 667 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 NCOA7Q8NI08 942 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 STRBPQ96SI9 672 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 SCAND2PQ9GZW5 306 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 ZSCAN16Q9H4T2 348 aaPredicted RBP17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 SNAP23O00161 211 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 HAND2P61296 217 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 CHRNDQ07001 517 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 ANP32BQ92688 251 aaKnown RBP17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 NBPF3Q9H094 633 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 BCL2L12Q9HB09 334 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 THSD7AQ9UPZ6 1657 aa17.49■□□□□ 0.39
SNCAIP-216ENST00000512146 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
SNCAIP-216ENST00000512146 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
SNCAIP-216ENST00000512146 ANTXR2P58335 489 aa17.48■□□□□ 0.39
SNCAIP-216ENST00000512146 MAP3K12Q12852 859 aa17.48■□□□□ 0.39
SNCAIP-216ENST00000512146 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
SNCAIP-216ENST00000512146 PDLIM2Q96JY6 352 aa17.48■□□□□ 0.39
SNCAIP-216ENST00000512146 TSPY26PQ9H489 355 aa17.48■□□□□ 0.39
SNCAIP-216ENST00000512146 PRC1O43663 620 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 ERFEQ4G0M1 354 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 FAM184AQ8NB25 1140 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 NARFQ9UHQ1 456 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 DDX11Q96FC9 970 aa17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 BSDC1Q9NW68 430 aaPredicted RBP17.47■□□□□ 0.39
SNCAIP-216ENST00000512146 SCN7AQ01118 1682 aa17.46■□□□□ 0.39
SNCAIP-216ENST00000512146 BCAMP50895 628 aa17.46■□□□□ 0.39
SNCAIP-216ENST00000512146 C3orf67Q6ZVT6 689 aa17.46■□□□□ 0.39
SNCAIP-216ENST00000512146 RALYLQ86SE5 291 aaKnown RBP17.46■□□□□ 0.39
SNCAIP-216ENST00000512146 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
SNCAIP-216ENST00000512146 USP21Q9UK80 565 aa17.46■□□□□ 0.39
SNCAIP-216ENST00000512146 DOCK2Q92608 1830 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 COL4A1P02462 1669 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 PATL2C9JE40 543 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 H3BQV1 296 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 CCT2P78371 535 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 TBC1D10CQ8IV04 446 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 ANKRD18AQ8IVF6 992 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 AIDAQ96BJ3 306 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 RRAGDQ9NQL2 400 aaPredicted RBP17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 HPS5Q9UPZ3 1129 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
SNCAIP-216ENST00000512146 KCNQ4P56696 695 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 UBE4AQ14139 1066 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 TBC1D9BQ66K14 1250 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 RGS22Q8NE09 1264 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 NHSQ6T4R5 1651 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 FDPSP14324 419 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 ADD1P35611 737 aaKnown RBP17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 FUCA2Q9BTY2 467 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 NYXQ9GZU5 481 aa17.44■□□□□ 0.38
SNCAIP-216ENST00000512146 DHX16O60231 1041 aaKnown RBP17.43■□□□□ 0.38
SNCAIP-216ENST00000512146 TRDNQ13061 729 aa17.43■□□□□ 0.38
SNCAIP-216ENST00000512146 ATL3Q6DD88 541 aa17.43■□□□□ 0.38
SNCAIP-216ENST00000512146 SPATA32Q96LK8 384 aa17.43■□□□□ 0.38
SNCAIP-216ENST00000512146 EPB41L4AQ9HCS5 686 aaPredicted RBP17.43■□□□□ 0.38
SNCAIP-216ENST00000512146 CARMIL3Q8ND23 1372 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms