RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 A0A1B0GUL7 405 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 MCM3P25205 808 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 CASQ1P31415 396 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 CEP120Q8N960 986 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 APOBRQ0VD83 1088 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 CDC5LQ99459 802 aaKnown RBP12.39□□□□□ -0.43
CPNE4-209ENST00000512055 TMX1Q9H3N1 280 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 SLAIN2Q9P270 581 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 PNPLA6Q8IY17 1366 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 RAD50Q92878 1312 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 WASF1Q92558 559 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 GOLGA6L9A6NEM1 432 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 WHAMMQ8TF30 809 aa12.39□□□□□ -0.43
CPNE4-209ENST00000512055 IBTKQ9P2D0 1353 aaPredicted RBP12.39□□□□□ -0.43
CPNE4-209ENST00000512055 AOX1Q06278 1338 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 BIN1O00499 593 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 RNF113AO15541 343 aaKnown RBP12.38□□□□□ -0.43
CPNE4-209ENST00000512055 USP5P45974 858 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 TMCO4Q5TGY1 634 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 DNAJC10Q8IXB1 793 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 EAF2Q96CJ1 260 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-209ENST00000512055 EYA2O00167 538 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 ADCY5O95622 1261 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 METAP2P50579 478 aaKnown RBP eCLIP12.38□□□□□ -0.43
CPNE4-209ENST00000512055 PKP1Q13835 747 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 CCDC152Q4G0S7 254 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 TMEM94Q12767 1356 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 SLC27A2O14975 620 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 IARSP41252 1262 aaKnown RBP12.38□□□□□ -0.43
CPNE4-209ENST00000512055 GBP7Q8N8V2 638 aaPredicted RBP12.38□□□□□ -0.43
CPNE4-209ENST00000512055 DDX19AQ9NUU7 478 aaKnown RBP12.38□□□□□ -0.43
CPNE4-209ENST00000512055 NOL7Q9UMY1 257 aaKnown RBP12.38□□□□□ -0.43
CPNE4-209ENST00000512055 PTPRMP28827 1452 aa12.38□□□□□ -0.43
CPNE4-209ENST00000512055 UQCRFS1P1P0C7P4 283 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 SFPQP23246 707 aaKnown RBP eCLIP12.37□□□□□ -0.43
CPNE4-209ENST00000512055 CLNS1AP54105 237 aaKnown RBP12.37□□□□□ -0.43
CPNE4-209ENST00000512055 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 TRMT1Q9NXH9 659 aaKnown RBP12.37□□□□□ -0.43
CPNE4-209ENST00000512055 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
CPNE4-209ENST00000512055 DNA2P51530 1060 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 CHAMP1Q96JM3 812 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
CPNE4-209ENST00000512055 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
CPNE4-209ENST00000512055 KIF5CO60282 957 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 NEBLO76041 1014 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 IQCA1Q86XH1 822 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 ATRIPQ8WXE1 791 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 SLC26A6Q9BXS9 759 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 MKNK2Q9HBH9 465 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 ZSCAN12O43309 604 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 LIG1P18858 919 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 HLTFQ14527 1009 aaKnown RBP eCLIP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 ARHGEF40Q8TER5 1519 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 PRC1O43663 620 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 ZNF165P49910 485 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 RBM5P52756 815 aaKnown RBP eCLIP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 CFAP100Q494V2 611 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 APBB1IPQ7Z5R6 666 aaPredicted RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 ANO10Q9NW15 660 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 DACH1Q9UI36 760 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 KRT18P05783 430 aaKnown RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 CAPN2P17655 700 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 CDK5RAP3Q96JB5 506 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 RNF41Q9H4P4 317 aaPredicted RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 KDRP35968 1356 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 SETD1BQ9UPS6 1966 aaKnown RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 PTCH1Q13635 1447 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 PTH1RQ03431 593 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 NBPF5PQ86XG9 351 aaPredicted RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 ZNF830Q96NB3 372 aaPredicted RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
CPNE4-209ENST00000512055 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 V9GYY5 206 aaPredicted RBP12.36□□□□□ -0.43
CPNE4-209ENST00000512055 CYP7A1P22680 504 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 MXRA7P84157 204 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 DHX32Q7L7V1 743 aaKnown RBP12.35□□□□□ -0.43
CPNE4-209ENST00000512055 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 MORC4Q8TE76 937 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
CPNE4-209ENST00000512055 LRCH2Q5VUJ6 765 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 NPHP4O75161 1426 aaPredicted RBP12.35□□□□□ -0.43
CPNE4-209ENST00000512055 ITGA6P23229 1130 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 SLC4A4Q9Y6R1 1079 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 IQGAP1P46940 1657 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 RXRAP19793 462 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 CTCFLQ8NI51 663 aaPredicted RBP12.35□□□□□ -0.43
CPNE4-209ENST00000512055 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
CPNE4-209ENST00000512055 RPS6KB1P23443 525 aa12.34□□□□□ -0.43
CPNE4-209ENST00000512055 AP1ARQ63HQ0 302 aa12.34□□□□□ -0.43
CPNE4-209ENST00000512055 MIGA1Q8NAN2 632 aa12.34□□□□□ -0.43
CPNE4-209ENST00000512055 ZSCAN29Q8IWY8 852 aaPredicted RBP12.34□□□□□ -0.43
CPNE4-209ENST00000512055 CEP112Q8N8E3 955 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms