RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 RTCBQ9Y3I0 505 aaKnown RBP8.75□□□□□ -1.01
RAB28-207ENST00000511649 KNSTRNQ9Y448 316 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 GTF3C3Q9Y5Q9 886 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 BCORQ6W2J9 1755 aa8.75□□□□□ -1.01
RAB28-207ENST00000511649 POLRMTO00411 1230 aaKnown RBP8.74□□□□□ -1.01
RAB28-207ENST00000511649 ZIC2O95409 532 aaPredicted RBP8.74□□□□□ -1.01
RAB28-207ENST00000511649 HSP90AB1P08238 724 aaKnown RBP8.74□□□□□ -1.01
RAB28-207ENST00000511649 CYP19A1P11511 503 aaPredicted RBP8.74□□□□□ -1.01
RAB28-207ENST00000511649 DHX9Q08211 1270 aaKnown RBP8.74□□□□□ -1.01
RAB28-207ENST00000511649 PPP1R26Q5T8A7 1209 aaPredicted RBP8.74□□□□□ -1.01
RAB28-207ENST00000511649 ZFAND3Q9H8U3 227 aa8.74□□□□□ -1.01
RAB28-207ENST00000511649 NPC1L1Q9UHC9 1359 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 PCNTO95613 3336 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 POTECB2RU33 542 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 KCNQ3O43525 872 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 CHRNA5P30532 468 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 RAB15P59190 212 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 AKAP4Q5JQC9 854 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 IL17REQ8NFR9 667 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 PHACTR3Q96KR7 559 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 COL15A1P39059 1388 aa8.73□□□□□ -1.01
RAB28-207ENST00000511649 TM4SF1P30408 202 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 SOX11P35716 441 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 CNGB1Q14028 1251 aaPredicted RBP8.72□□□□□ -1.01
RAB28-207ENST00000511649 C1orf141Q5JVX7 400 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 USPL1Q5W0Q7 1092 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 PGPEP1Q9NXJ5 209 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 DLG5Q8TDM6 1919 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 CEMIPQ8WUJ3 1361 aa8.72□□□□□ -1.01
RAB28-207ENST00000511649 TIAM2Q8IVF5 1701 aa8.71□□□□□ -1.01
RAB28-207ENST00000511649 CCDC88AQ3V6T2 1871 aa8.71□□□□□ -1.01
RAB28-207ENST00000511649 PRAMEF22A3QJZ6 481 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 A6NJR5 290 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 ERVH48-1M5A8F1 160 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 DIAPH1O60610 1272 aaKnown RBP8.71□□□□□ -1.02
RAB28-207ENST00000511649 RFC4P35249 363 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 NFIXQ14938 502 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 NLGN1Q8N2Q7 840 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 ZNF496Q96IT1 587 aaPredicted RBP8.71□□□□□ -1.02
RAB28-207ENST00000511649 NMRK2Q9NPI5 230 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 ATP13A2Q9NQ11 1180 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 TMPRSS4Q9NRS4 437 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 CEP126Q9P2H0 1117 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
RAB28-207ENST00000511649 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
RAB28-207ENST00000511649 BMP1P13497 986 aa8.7□□□□□ -1.02
RAB28-207ENST00000511649 TGFB2P61812 414 aa8.7□□□□□ -1.02
RAB28-207ENST00000511649 RNF20Q5VTR2 975 aa8.7□□□□□ -1.02
RAB28-207ENST00000511649 TNRC6CQ9HCJ0 1690 aaKnown RBP8.69□□□□□ -1.02
RAB28-207ENST00000511649 WDR90Q96KV7 1748 aa8.69□□□□□ -1.02
RAB28-207ENST00000511649 POM121CA8CG34 1229 aa8.69□□□□□ -1.02
RAB28-207ENST00000511649 PIP4K2AP48426 406 aaPredicted RBP8.69□□□□□ -1.02
RAB28-207ENST00000511649 RASSF7Q02833 373 aa8.69□□□□□ -1.02
RAB28-207ENST00000511649 TRIM46Q7Z4K8 759 aa8.69□□□□□ -1.02
RAB28-207ENST00000511649 MEIOBQ8N635 442 aa8.69□□□□□ -1.02
RAB28-207ENST00000511649 KDM3BQ7LBC6 1761 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 ARFGEF2Q9Y6D5 1785 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 SLX4Q8IY92 1834 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 FER1L6Q2WGJ9 1857 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 EIF5P55010 431 aaKnown RBP8.68□□□□□ -1.02
RAB28-207ENST00000511649 SEMA3FQ13275 785 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 C9orf131Q5VYM1 1079 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 SLC51AQ86UW1 340 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
RAB28-207ENST00000511649 NARFQ9UHQ1 456 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 HEG1Q9ULI3 1381 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 LAMB4A4D0S4 1761 aa8.68□□□□□ -1.02
RAB28-207ENST00000511649 HSPA6P17066 643 aa8.67□□□□□ -1.02
RAB28-207ENST00000511649 CANXP27824 592 aaKnown RBP8.67□□□□□ -1.02
RAB28-207ENST00000511649 PRKAR2BP31323 418 aa8.67□□□□□ -1.02
RAB28-207ENST00000511649 HTRA3P83110 453 aa8.67□□□□□ -1.02
RAB28-207ENST00000511649 CBLBQ13191 982 aa8.67□□□□□ -1.02
RAB28-207ENST00000511649 TBC1D9BQ66K14 1250 aa8.67□□□□□ -1.02
RAB28-207ENST00000511649 MRPL14Q6P1L8 145 aaKnown RBP8.67□□□□□ -1.02
RAB28-207ENST00000511649 ALG2Q9H553 416 aa8.67□□□□□ -1.02
RAB28-207ENST00000511649 NFKBIEO00221 500 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 U2SURPO15042 1029 aaKnown RBP8.66□□□□□ -1.02
RAB28-207ENST00000511649 LILRA1O75019 489 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 A1BGP04217 495 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 PPP2R1AP30153 589 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 DCTN1Q14203 1278 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 ZNF790Q6PG37 636 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 ARHGAP27Q6ZUM4 889 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 Q6ZVU0 165 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 PHTF2Q8N3S3 785 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 ADAMTS19Q8TE59 1207 aa8.66□□□□□ -1.02
RAB28-207ENST00000511649 DICER1Q9UPY3 1922 aaKnown RBP8.66□□□□□ -1.02
RAB28-207ENST00000511649 CAMTA2O94983 1202 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 HMGB2P26583 209 aaKnown RBP8.65□□□□□ -1.02
RAB28-207ENST00000511649 SLFNL1Q499Z3 407 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 MCM10Q7L590 875 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 LINC00528Q8N1L1 170 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 CCDC85AQ96PX6 553 aaPredicted RBP8.65□□□□□ -1.02
RAB28-207ENST00000511649 CYLDQ9NQC7 956 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 USP16Q9Y5T5 823 aa8.65□□□□□ -1.02
RAB28-207ENST00000511649 GNAT3A8MTJ3 354 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms