RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 SSRP1Q08945 709 aaKnown RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 IKQ13123 557 aaPredicted RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 MAP7Q14244 749 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 GTF3C2Q8WUA4 911 aaPredicted RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 TAF4BQ92750 862 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 NEUROD6Q96NK8 337 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 NUP62CLQ9H1M0 184 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 SLC12A7Q9Y666 1083 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 NWD2Q9ULI1 1742 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 EIF2S2P20042 333 aaKnown RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 MCM10Q7L590 875 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 VSIG10Q8N0Z9 540 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 KIAA0754O94854 1291 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 SETDB2Q96T68 719 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 UTP14AQ9BVJ6 771 aaKnown RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 BACH2Q9BYV9 841 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 TM6SF1Q9BZW5 370 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 KDM3AQ9Y4C1 1321 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 PAFAH1B1P43034 410 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 HAUS3Q68CZ6 603 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 KRT26Q7Z3Y9 468 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 ZCRB1Q8TBF4 217 aaKnown RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 LTV1Q96GA3 475 aaPredicted RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 C8orf76Q96K31 380 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 MKNK2Q9HBH9 465 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 GAS8O95995 478 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 SFPQP23246 707 aaKnown RBP eCLIP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 RARSP54136 660 aaKnown RBP5.63□□□□□ -1.51
PTPN13-209ENST00000511467 TERF1P54274 439 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 MFSD6Q6ZSS7 791 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 PLCB1Q9NQ66 1216 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 TECPR2O15040 1411 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 WDR19Q8NEZ3 1342 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 SMYD5Q6GMV2 418 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 MAIP1Q8WWC4 291 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 SPATA32Q96LK8 384 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 GPR108Q9NPR9 543 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 RGPD1P0DJD0 1748 aa5.63□□□□□ -1.51
PTPN13-209ENST00000511467 FLIIQ13045 1269 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 SEPT2Q15019 361 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 TTC6Q86TZ1 520 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.62□□□□□ -1.51
PTPN13-209ENST00000511467 IMPG2Q9BZV3 1241 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 PDRG1Q9NUG6 133 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 UBR2Q8IWV8 1755 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 NRXN1Q9ULB1 1477 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 WDR17Q8IZU2 1322 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 MYO3BQ8WXR4 1341 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 THAP12O43422 761 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 RAPGEF3O95398 923 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 NFKBIAP25963 317 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC181Q5TID7 509 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 TTC39CQ8N584 583 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 NOB1Q9ULX3 412 aaKnown RBP5.62□□□□□ -1.51
PTPN13-209ENST00000511467 A0A1B0GVL5 298 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 YEATS4O95619 227 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 ALCAMQ13740 583 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 ZNF772Q68DY9 489 aaPredicted RBP5.62□□□□□ -1.51
PTPN13-209ENST00000511467 KRT28Q7Z3Y7 464 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 IFT122Q9HBG6 1241 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 C6orf50Q9HD87 102 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 IMPACTQ9P2X3 320 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 CCDC194A0A1B0GVG4 234 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 NEK4P51957 841 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 AACSQ86V21 672 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 SYTL4Q96C24 671 aaPredicted RBP5.62□□□□□ -1.51
PTPN13-209ENST00000511467 ARHGEF10LQ9HCE6 1279 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 PPP1R1BQ9UD71 204 aaPredicted RBP5.62□□□□□ -1.51
PTPN13-209ENST00000511467 ZNF76P36508 570 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 SLC8A3P57103 927 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 CUL4BQ13620 913 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 TRIM5Q9C035 493 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 EXOC7Q9UPT5 735 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 FOXP2O15409 715 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 ATP2A2P16615 1042 aaKnown RBP5.62□□□□□ -1.51
PTPN13-209ENST00000511467 ME1P48163 572 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 PLCD1P51178 756 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 KRT83P78385 493 aa5.62□□□□□ -1.51
PTPN13-209ENST00000511467 DCAF15Q66K64 600 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 FAM89AQ96GI7 184 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 CDHR1Q96JP9 859 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 NPHP4O75161 1426 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 VPS37CA5D8V6 355 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 N4BP1O75113 896 aaKnown RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 ACTN2P35609 894 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 ERCC6LQ2NKX8 1250 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 ANKRD13DQ6ZTN6 518 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 KIRREL3Q8IZU9 778 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 NECTIN2Q92692 538 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 UPF3BQ9BZI7 483 aaKnown RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 AKAP11Q9UKA4 1901 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 RFC4P35249 363 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 ANKRD44Q8N8A2 993 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 KIFAP3Q92845 792 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 PFDN4Q9NQP4 134 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 PHRF1Q9P1Y6 1649 aaKnown RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 SOX12O15370 315 aa5.61□□□□□ -1.51
PTPN13-209ENST00000511467 CYLC1P35663 651 aaPredicted RBP5.61□□□□□ -1.51
PTPN13-209ENST00000511467 RTCBQ9Y3I0 505 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms