RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 C2CD5Q86YS7 1000 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 GOPCQ9HD26 462 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 PKD2L1Q9P0L9 805 aa9.91□□□□□ -0.82
SMAD1-210ENST00000511255 DBF4Q9UBU7 674 aaPredicted RBP9.91□□□□□ -0.82
SMAD1-210ENST00000511255 AFDNP55196 1824 aaKnown RBP9.91□□□□□ -0.82
SMAD1-210ENST00000511255 ZBTB24O43167 697 aaPredicted RBP9.9□□□□□ -0.82
SMAD1-210ENST00000511255 PDE6BP35913 854 aa9.9□□□□□ -0.82
SMAD1-210ENST00000511255 TRIM32Q13049 653 aa9.9□□□□□ -0.82
SMAD1-210ENST00000511255 DALRD3Q5D0E6 543 aaKnown RBP9.9□□□□□ -0.82
SMAD1-210ENST00000511255 TPTE2Q6XPS3 522 aa9.9□□□□□ -0.82
SMAD1-210ENST00000511255 C8orf58Q8NAV2 365 aa9.9□□□□□ -0.82
SMAD1-210ENST00000511255 ZNF622Q969S3 477 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMAD1-210ENST00000511255 KIF13BQ9NQT8 1826 aa9.9□□□□□ -0.82
SMAD1-210ENST00000511255 IL16Q14005 1332 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 CCER2I3L3R5 266 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 KCNA3P22001 575 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 PPP2R2DQ66LE6 453 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 ARHGAP27Q6ZUM4 889 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 LRP10Q7Z4F1 713 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 WDR63Q8IWG1 891 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 TSPYL6Q8N831 410 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 BRIP1Q9BX63 1249 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 CHMP4AQ9BY43 222 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 NYXQ9GZU5 481 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 HYPKQ9NX55 129 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 NRXN2Q9P2S2 1712 aa9.89□□□□□ -0.83
SMAD1-210ENST00000511255 FANCIQ9NVI1 1328 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 KIAA1551Q9HCM1 1747 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 TCERG1O14776 1098 aaKnown RBP9.88□□□□□ -0.83
SMAD1-210ENST00000511255 SKOR1P84550 965 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 KCNH2Q12809 1159 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 TWISTNBQ3B726 338 aaPredicted RBP9.88□□□□□ -0.83
SMAD1-210ENST00000511255 HSP90AB3PQ58FF7 597 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 CCDC30Q5VVM6 783 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 TTLL6Q8N841 843 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 STK31Q9BXU1 1019 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 ATP10DQ9P241 1426 aa9.88□□□□□ -0.83
SMAD1-210ENST00000511255 UBN2Q6ZU65 1347 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 CTDSPL2Q05D32 466 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 PARP10Q53GL7 1025 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 SUSD4Q5VX71 490 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 PPP1R42Q7Z4L9 355 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 ZNF34Q8IZ26 560 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 PLBD2Q8NHP8 589 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 ZNF428Q96B54 188 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 MYH16Q9H6N6 1097 aa9.87□□□□□ -0.83
SMAD1-210ENST00000511255 PHAXQ9H814 394 aaKnown RBP9.87□□□□□ -0.83
SMAD1-210ENST00000511255 CHD4Q14839 1912 aa9.86□□□□□ -0.83
SMAD1-210ENST00000511255 F12P00748 615 aaPredicted RBP9.86□□□□□ -0.83
SMAD1-210ENST00000511255 EXOSC9Q06265 439 aaKnown RBP9.86□□□□□ -0.83
SMAD1-210ENST00000511255 FOXC1Q12948 553 aa9.86□□□□□ -0.83
SMAD1-210ENST00000511255 ERFEQ4G0M1 354 aa9.86□□□□□ -0.83
SMAD1-210ENST00000511255 TSC1Q92574 1164 aa9.86□□□□□ -0.83
SMAD1-210ENST00000511255 MASTLQ96GX5 879 aa9.86□□□□□ -0.83
SMAD1-210ENST00000511255 UTP14AQ9BVJ6 771 aaKnown RBP9.86□□□□□ -0.83
SMAD1-210ENST00000511255 NUP98P52948 1817 aa9.86□□□□□ -0.83
SMAD1-210ENST00000511255 ATP5J2-PTCD1G3V325 749 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 TNFRSF10AO00220 468 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 NTSR2O95665 410 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 DDX58O95786 925 aaKnown RBP9.85□□□□□ -0.83
SMAD1-210ENST00000511255 SRGNP10124 158 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 TCIRG1Q13488 830 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 CNKSR1Q969H4 720 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 UNC93B1Q9H1C4 597 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 AAASQ9NRG9 546 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 ABCC12Q96J65 1359 aa9.85□□□□□ -0.83
SMAD1-210ENST00000511255 UTRNP46939 3433 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 FAM187AA6NFU0 413 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 ST8SIA5O15466 376 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 C21orf2O43822 256 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 NPR1P16066 1061 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 STYK1Q6J9G0 422 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 NLRP10Q86W26 655 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 ZNF784Q8NCA9 323 aaPredicted RBP9.84□□□□□ -0.83
SMAD1-210ENST00000511255 MYD88Q99836 296 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 MAP10Q9P2G4 905 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 TRMT112Q9UI30 125 aaKnown RBP9.84□□□□□ -0.83
SMAD1-210ENST00000511255 ANKRD31Q8N7Z5 1873 aa9.84□□□□□ -0.83
SMAD1-210ENST00000511255 IBTKQ9P2D0 1353 aaPredicted RBP9.84□□□□□ -0.83
SMAD1-210ENST00000511255 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
SMAD1-210ENST00000511255 GOLGB1Q14789 3259 aaKnown RBP9.83□□□□□ -0.84
SMAD1-210ENST00000511255 RASSF7Q02833 373 aa9.83□□□□□ -0.84
SMAD1-210ENST00000511255 C9orf131Q5VYM1 1079 aa9.83□□□□□ -0.84
SMAD1-210ENST00000511255 PRPF40BQ6NWY9 871 aaKnown RBP9.83□□□□□ -0.84
SMAD1-210ENST00000511255 ZNF526Q8TF50 670 aaPredicted RBP9.83□□□□□ -0.84
SMAD1-210ENST00000511255 RPGRQ92834 1020 aaKnown RBP9.83□□□□□ -0.84
SMAD1-210ENST00000511255 PCMTD1Q96MG8 357 aaPredicted RBP9.83□□□□□ -0.84
SMAD1-210ENST00000511255 NLRP3Q96P20 1036 aa9.83□□□□□ -0.84
SMAD1-210ENST00000511255 RNF181Q9P0P0 153 aa9.83□□□□□ -0.84
SMAD1-210ENST00000511255 SH3TC1Q8TE82 1336 aa9.82□□□□□ -0.84
SMAD1-210ENST00000511255 COL11A2P13942 1736 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-210ENST00000511255 VAMP4O75379 141 aa9.82□□□□□ -0.84
SMAD1-210ENST00000511255 HCLS1P14317 486 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-210ENST00000511255 ALDH1B1P30837 517 aa9.82□□□□□ -0.84
SMAD1-210ENST00000511255 CTHP32929 405 aa9.82□□□□□ -0.84
SMAD1-210ENST00000511255 SH3BP2P78314 561 aa9.82□□□□□ -0.84
SMAD1-210ENST00000511255 HELBQ8NG08 1087 aaPredicted RBP9.82□□□□□ -0.84
SMAD1-210ENST00000511255 BAP1Q92560 729 aa9.82□□□□□ -0.84
SMAD1-210ENST00000511255 RBM17Q96I25 401 aaKnown RBP9.82□□□□□ -0.84
SMAD1-210ENST00000511255 MAP3K2Q9Y2U5 619 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms