RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 APLP1P51693 650 aa11.08□□□□□ -0.64
PDPN-209ENST00000510906 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
PDPN-209ENST00000510906 CC2D2BQ6DHV5 1058 aa11.08□□□□□ -0.64
PDPN-209ENST00000510906 SAMD7Q7Z3H4 446 aa11.08□□□□□ -0.64
PDPN-209ENST00000510906 ABCC4O15439 1325 aa11.08□□□□□ -0.64
PDPN-209ENST00000510906 IL16Q14005 1332 aa11.08□□□□□ -0.64
PDPN-209ENST00000510906 POTEB3A0JP26 581 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 APBB1O00213 710 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 FDX1P10109 184 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 POTEBQ6S5H4 581 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 FAM9BQ8IZU0 186 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 PSMD1Q99460 953 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 PCDHGC3Q9UN70 934 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 ZNF541Q9H0D2 1346 aa11.07□□□□□ -0.64
PDPN-209ENST00000510906 RAD21O60216 631 aa11.06□□□□□ -0.64
PDPN-209ENST00000510906 SLC4A3P48751 1232 aa11.06□□□□□ -0.64
PDPN-209ENST00000510906 FSTL1Q12841 308 aa11.06□□□□□ -0.64
PDPN-209ENST00000510906 TRIM28Q13263 835 aaKnown RBP11.06□□□□□ -0.64
PDPN-209ENST00000510906 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
PDPN-209ENST00000510906 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
PDPN-209ENST00000510906 MYD88Q99836 296 aa11.06□□□□□ -0.64
PDPN-209ENST00000510906 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
PDPN-209ENST00000510906 ANKRD36CQ5JPF3 1778 aa11.05□□□□□ -0.64
PDPN-209ENST00000510906 CCDC88AQ3V6T2 1871 aa11.05□□□□□ -0.64
PDPN-209ENST00000510906 DDX46Q7L014 1031 aaKnown RBP11.05□□□□□ -0.64
PDPN-209ENST00000510906 SMC1BQ8NDV3 1235 aa11.05□□□□□ -0.64
PDPN-209ENST00000510906 HLA-CQ95604 372 aa11.05□□□□□ -0.64
PDPN-209ENST00000510906 ATP6V0A2Q9Y487 856 aa11.05□□□□□ -0.64
PDPN-209ENST00000510906 COL4A5P29400 1685 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 FZD9O00144 591 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 IRS4O14654 1257 aaPredicted RBP11.04□□□□□ -0.64
PDPN-209ENST00000510906 BBOX1O75936 387 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 CFHP08603 1231 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 HTRA3P83110 453 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 GRAPQ13588 217 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 GRIPAP1Q4V328 841 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 G2E3Q7L622 706 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
PDPN-209ENST00000510906 ZFRQ96KR1 1074 aaKnown RBP11.04□□□□□ -0.64
PDPN-209ENST00000510906 METTL22Q9BUU2 404 aaPredicted RBP11.04□□□□□ -0.64
PDPN-209ENST00000510906 STK31Q9BXU1 1019 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 CHMP4AQ9BY43 222 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 TNRC18O15417 2968 aaPredicted RBP11.04□□□□□ -0.64
PDPN-209ENST00000510906 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
PDPN-209ENST00000510906 PI4KAP2A4QPH2 592 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 DDX58O95786 925 aaKnown RBP11.03□□□□□ -0.64
PDPN-209ENST00000510906 GUCA2AQ02747 115 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 SF3B3Q15393 1217 aaKnown RBP11.03□□□□□ -0.64
PDPN-209ENST00000510906 LCE2DQ5TA82 110 aaPredicted RBP11.03□□□□□ -0.64
PDPN-209ENST00000510906 WDR63Q8IWG1 891 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 LARGE2Q8N3Y3 721 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 PI4KAP1Q8N8J0 262 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 ZBTB38Q8NAP3 1195 aaPredicted RBP11.03□□□□□ -0.64
PDPN-209ENST00000510906 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 JDP2Q8WYK2 163 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 JARID2Q92833 1246 aaPredicted RBP11.03□□□□□ -0.64
PDPN-209ENST00000510906 TMX4Q9H1E5 349 aaPredicted RBP11.03□□□□□ -0.64
PDPN-209ENST00000510906 MAP3K2Q9Y2U5 619 aa11.03□□□□□ -0.64
PDPN-209ENST00000510906 DICER1Q9UPY3 1922 aaKnown RBP11.03□□□□□ -0.64
PDPN-209ENST00000510906 PPIP5K2O43314 1243 aa11.02□□□□□ -0.65
PDPN-209ENST00000510906 USP17L8P0C7I0 530 aa11.02□□□□□ -0.65
PDPN-209ENST00000510906 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
PDPN-209ENST00000510906 FUT2Q10981 343 aa11.02□□□□□ -0.65
PDPN-209ENST00000510906 AOC3Q16853 763 aa11.02□□□□□ -0.65
PDPN-209ENST00000510906 KSR2Q6VAB6 950 aa11.02□□□□□ -0.65
PDPN-209ENST00000510906 CELF1Q92879 486 aaKnown RBP11.02□□□□□ -0.65
PDPN-209ENST00000510906 KLRG1Q96E93 195 aa11.02□□□□□ -0.65
PDPN-209ENST00000510906 TAF1DQ9H5J8 278 aaPredicted RBP11.02□□□□□ -0.65
PDPN-209ENST00000510906 CWC25Q9NXE8 425 aaPredicted RBP11.02□□□□□ -0.65
PDPN-209ENST00000510906 IQCA1LA6NCM1 817 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 HRO43593 1189 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 VAMP4O75379 141 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 AP1G2O75843 785 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 PCCAP05165 728 aaPredicted RBP11.01□□□□□ -0.65
PDPN-209ENST00000510906 IGKV5-2P06315 115 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 EIF6P56537 245 aaKnown RBP11.01□□□□□ -0.65
PDPN-209ENST00000510906 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
PDPN-209ENST00000510906 MTMR2Q13614 643 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 ADGRD1Q6QNK2 874 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 DPP8Q6V1X1 898 aaPredicted RBP11.01□□□□□ -0.65
PDPN-209ENST00000510906 MPNDQ8N594 471 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 RTFDC1Q9BY42 306 aaPredicted RBP11.01□□□□□ -0.65
PDPN-209ENST00000510906 GJA3Q9Y6H8 435 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 COL4A1P02462 1669 aa11.01□□□□□ -0.65
PDPN-209ENST00000510906 LAMB2P55268 1798 aa11□□□□□ -0.65
PDPN-209ENST00000510906 NIM1KQ8IY84 436 aa11□□□□□ -0.65
PDPN-209ENST00000510906 GPC2Q8N158 579 aa11□□□□□ -0.65
PDPN-209ENST00000510906 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
PDPN-209ENST00000510906 SEC31BQ9NQW1 1179 aa11□□□□□ -0.65
PDPN-209ENST00000510906 HACL1Q9UJ83 578 aa11□□□□□ -0.65
PDPN-209ENST00000510906 DDX60Q8IY21 1712 aaKnown RBP11□□□□□ -0.65
PDPN-209ENST00000510906 PDE8AO60658 829 aa10.99□□□□□ -0.65
PDPN-209ENST00000510906 EPHX2P34913 555 aa10.99□□□□□ -0.65
PDPN-209ENST00000510906 KIAA2012Q0VF49 1180 aa10.99□□□□□ -0.65
PDPN-209ENST00000510906 CWF19L2Q2TBE0 894 aaKnown RBP10.99□□□□□ -0.65
PDPN-209ENST00000510906 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
PDPN-209ENST00000510906 TMC4Q7Z404 712 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms