RNA–Protein interactions for RNA: ENST00000509903.5

CAST-228, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-228ENST00000509903 BRINP3Q76B58 766 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 USP48Q86UV5 1035 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 DDX54Q8TDD1 881 aaKnown RBP8.93□□□□□ -0.98
CAST-228ENST00000509903 FBXO41Q8TF61 875 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 DBNLQ9UJU6 430 aaKnown RBP8.93□□□□□ -0.98
CAST-228ENST00000509903 MED23Q9ULK4 1368 aa8.93□□□□□ -0.98
CAST-228ENST00000509903 F13A1P00488 732 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 ATP5JP18859 108 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 GJB2P29033 226 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 BLOC1S2Q6QNY1 142 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 TSC1Q92574 1164 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 TCHHQ07283 1943 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 GADD45BO75293 160 aaPredicted RBP8.92□□□□□ -0.98
CAST-228ENST00000509903 ANKRD1Q15327 319 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 LMBR1LQ6UX01 489 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 CCDC125Q86Z20 511 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 EDC3Q96F86 508 aaKnown RBP8.92□□□□□ -0.98
CAST-228ENST00000509903 DNAJC2Q99543 621 aaKnown RBP8.92□□□□□ -0.98
CAST-228ENST00000509903 HMG20BQ9P0W2 317 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 CNPY2Q9Y2B0 182 aa8.92□□□□□ -0.98
CAST-228ENST00000509903 ERVV-2B6SEH9 535 aa8.91□□□□□ -0.98
CAST-228ENST00000509903 ME3Q16798 604 aa8.91□□□□□ -0.98
CAST-228ENST00000509903 TYW1BQ6NUM6 668 aa8.91□□□□□ -0.98
CAST-228ENST00000509903 ZNF589Q86UQ0 364 aaPredicted RBP8.91□□□□□ -0.98
CAST-228ENST00000509903 TMEM87AQ8NBN3 555 aa8.91□□□□□ -0.98
CAST-228ENST00000509903 DBNDD2Q9BQY9 259 aa8.91□□□□□ -0.98
CAST-228ENST00000509903 TSPY26PQ9H489 355 aa8.91□□□□□ -0.98
CAST-228ENST00000509903 OCEL1Q9H607 264 aa8.91□□□□□ -0.98
CAST-228ENST00000509903 CWC25Q9NXE8 425 aaPredicted RBP8.91□□□□□ -0.98
CAST-228ENST00000509903 VPS37CA5D8V6 355 aaPredicted RBP8.9□□□□□ -0.98
CAST-228ENST00000509903 NBPF26B4DH59 902 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 FIBPO43427 364 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 IL2RBP14784 551 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 CASP7P55210 303 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 NBPF14Q5TI25 921 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 NBPF10Q6P3W6 841 aaKnown RBP8.9□□□□□ -0.98
CAST-228ENST00000509903 NBPF15Q8N660 670 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 NECAB1Q8N987 351 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 L3MBTL3Q96JM7 780 aaPredicted RBP8.9□□□□□ -0.98
CAST-228ENST00000509903 RFX7Q2KHR2 1363 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 GLI3P10071 1580 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 TAF5LO75529 589 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 TCF3P15923 654 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 RPS6KB1P23443 525 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 MSNP26038 577 aaKnown RBP8.9□□□□□ -0.98
CAST-228ENST00000509903 UBE2HP62256 183 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 KRT32Q14532 448 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 TTLL7Q6ZT98 887 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 ZSCAN30Q86W11 494 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 RNF214Q8ND24 703 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 TPCN1Q9ULQ1 816 aa8.9□□□□□ -0.98
CAST-228ENST00000509903 COL5A2P05997 1499 aaPredicted RBP8.89□□□□□ -0.99
CAST-228ENST00000509903 JCADQ9P266 1359 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 H7C1W4 665 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 A1BGP04217 495 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 PDCP20941 246 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 DDX46Q7L014 1031 aaKnown RBP8.89□□□□□ -0.99
CAST-228ENST00000509903 TCEANC2Q96MN5 208 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 NEUROD6Q96NK8 337 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 NAP1L5Q96NT1 182 aaPredicted RBP8.89□□□□□ -0.99
CAST-228ENST00000509903 HAUS7Q99871 368 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 ZBTB3Q9H5J0 574 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 STRN4Q9NRL3 753 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 MTMR6Q9Y217 621 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 FOXO4P98177 505 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 CCDC183Q5T5S1 534 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 LARP1BQ659C4 914 aaKnown RBP8.89□□□□□ -0.99
CAST-228ENST00000509903 CCDC191Q8NCU4 936 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 CARD10Q9BWT7 1032 aa8.89□□□□□ -0.99
CAST-228ENST00000509903 SOS2Q07890 1332 aaPredicted RBP8.88□□□□□ -0.99
CAST-228ENST00000509903 DTNBO60941 627 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 IL15P40933 162 aaPredicted RBP8.88□□□□□ -0.99
CAST-228ENST00000509903 EVA1CP58658 441 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 ST3GAL1Q11201 340 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 TSGA10IPQ3SY00 556 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 MCMDC2Q4G0Z9 681 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 HS1BP3Q53T59 392 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 PDLIM2Q96JY6 352 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 PPP1R1BQ9UD71 204 aaPredicted RBP8.88□□□□□ -0.99
CAST-228ENST00000509903 UBR2Q8IWV8 1755 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 KCPQ6ZWJ8 1503 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 LETM1O95202 739 aaPredicted RBP8.88□□□□□ -0.99
CAST-228ENST00000509903 DNM1Q05193 864 aaKnown RBP8.88□□□□□ -0.99
CAST-228ENST00000509903 USPL1Q5W0Q7 1092 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 DEPDC4Q8N2C3 294 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 KBTBD3Q8NAB2 608 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 NEK1Q96PY6 1258 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 ALDH8A1Q9H2A2 487 aaPredicted RBP8.88□□□□□ -0.99
CAST-228ENST00000509903 TAF6LQ9Y6J9 622 aa8.88□□□□□ -0.99
CAST-228ENST00000509903 XIRP1Q702N8 1843 aaKnown RBP8.87□□□□□ -0.99
CAST-228ENST00000509903 ZNF609O15014 1411 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 G3V3G9 751 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 GOLIM4O00461 696 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 STK3Q13188 491 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 TOB2Q14106 344 aaPredicted RBP8.87□□□□□ -0.99
CAST-228ENST00000509903 NUP188Q5SRE5 1749 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 CCDC129Q6ZRS4 1044 aa8.87□□□□□ -0.99
CAST-228ENST00000509903 ATG9AQ7Z3C6 839 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms