RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 PRKCSHP14314 528 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 CTHP32929 405 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 PRR20EP86478 221 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 PRR20CP86479 221 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 PRR20DP86480 221 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 PRR20BP86481 221 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 PRR20AP86496 221 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 FOXC1Q12948 553 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 CNGB1Q14028 1251 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 TAF7Q15545 349 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 HLFQ16534 295 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 ZNF277Q9NRM2 450 aaPredicted RBP11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 EVA1BQ9NVM1 165 aa11.46□□□□□ -0.57
COL4A3BP-206ENST00000508809 TMEM88BA6NKF7 163 aa11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 U2AF1L5P0DN76 240 aaPredicted RBP11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 U2AF1Q01081 240 aaKnown RBP eCLIP11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 KCNH2Q12809 1159 aa11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 OLFM4Q6UX06 510 aa11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 Q6ZNB5 142 aa11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 SYNE4Q8N205 404 aa11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 HACL1Q9UJ83 578 aa11.45□□□□□ -0.58
COL4A3BP-206ENST00000508809 SNED1Q8TER0 1413 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 NUP98P52948 1817 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 ZNF541Q9H0D2 1346 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 ERVV-1B6SEH8 477 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 FOXN1O15353 648 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 PPP2R1AP30153 589 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 VEGFBP49765 207 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 WNT7BP56706 349 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 DCTN1Q14203 1278 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 CRY2Q49AN0 593 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 PSMD1Q99460 953 aa11.44□□□□□ -0.58
COL4A3BP-206ENST00000508809 TNFRSF10AO00220 468 aa11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 HOXA10P31260 410 aaPredicted RBP11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 EPHX2P34913 555 aa11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 IARSP41252 1262 aaKnown RBP11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 CC2D2BQ6DHV5 1058 aa11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 PNMA8AQ86V59 439 aaPredicted RBP11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 GPC2Q8N158 579 aa11.43□□□□□ -0.58
COL4A3BP-206ENST00000508809 RASSF10A6NK89 507 aa11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 CTCFP49711 727 aaPredicted RBP11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 EAPPQ56P03 285 aaPredicted RBP11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 CNTROBQ8N137 903 aa11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 PROCA1Q8NCQ7 364 aaPredicted RBP11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 NYXQ9GZU5 481 aa11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 UNC93B1Q9H1C4 597 aa11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 MIS18AQ9NYP9 233 aa11.42□□□□□ -0.58
COL4A3BP-206ENST00000508809 DLG5Q8TDM6 1919 aa11.41□□□□□ -0.58
COL4A3BP-206ENST00000508809 FAM177BA6PVY3 158 aa11.41□□□□□ -0.58
COL4A3BP-206ENST00000508809 GDF9O60383 454 aa11.41□□□□□ -0.58
COL4A3BP-206ENST00000508809 GTF2E1P29083 439 aaPredicted RBP11.41□□□□□ -0.58
COL4A3BP-206ENST00000508809 RNF123Q5XPI4 1314 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 MAP3K15Q6ZN16 1313 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 WNT7AO00755 349 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 EIF4A1P60842 406 aaKnown RBP11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 MAP1SQ66K74 1059 aaPredicted RBP11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 PPP2R2DQ66LE6 453 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 CYP4X1Q8N118 509 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 LAMB4A4D0S4 1761 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 RIC1Q4ADV7 1423 aa11.4□□□□□ -0.58
COL4A3BP-206ENST00000508809 PTCRAQ6ISU1 281 aaPredicted RBP11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 TTLL7Q6ZT98 887 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 TRIM67Q6ZTA4 783 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 ZNF34Q8IZ26 560 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 ARMC2Q8NEN0 867 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 AIDAQ96BJ3 306 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 CRAMP1Q96RY5 1269 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 PLEKHF1Q96S99 279 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 ABCC12Q96J65 1359 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 IBTKQ9P2D0 1353 aaPredicted RBP11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 KDM3BQ7LBC6 1761 aa11.39□□□□□ -0.59
COL4A3BP-206ENST00000508809 EIF6P56537 245 aaKnown RBP11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 PKDCCQ504Y2 493 aa11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 SUSD4Q5VX71 490 aa11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 NGEFQ8N5V2 710 aa11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 DDX21Q9NR30 783 aaKnown RBP eCLIP11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 COL4A5P29400 1685 aa11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 LTBP1Q14766 1721 aa11.38□□□□□ -0.59
COL4A3BP-206ENST00000508809 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 WDR33Q9C0J8 1336 aaKnown RBP11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 TTC24A2A3L6 582 aaPredicted RBP11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 SCNN1DP51172 638 aa11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 LBX1P52954 281 aa11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 MAP2K1Q02750 393 aaPredicted RBP11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 RBM17Q96I25 401 aaKnown RBP11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 VPS33BQ9H267 617 aa11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 RRP7AQ9Y3A4 280 aaKnown RBP11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 TRPM7Q96QT4 1865 aa11.37□□□□□ -0.59
COL4A3BP-206ENST00000508809 AP1G2O75843 785 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 NTSR2O95665 410 aa11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 F12P00748 615 aaPredicted RBP11.36□□□□□ -0.59
COL4A3BP-206ENST00000508809 HSPA8P11142 646 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms