RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 ABCC12Q96J65 1359 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 RNF113AO15541 343 aaKnown RBP9.55□□□□□ -0.88
NR1I3-226ENST00000508740 ATMINO43313 823 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-226ENST00000508740 CHGBP05060 677 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 SSFA2P28290 1259 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 GTF2E1P29083 439 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-226ENST00000508740 KCNJ4P48050 445 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 ZMYM1Q5SVZ6 1142 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 CREB3L3Q68CJ9 461 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 C3orf67Q6ZVT6 689 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 ZNF589Q86UQ0 364 aaPredicted RBP9.55□□□□□ -0.88
NR1I3-226ENST00000508740 CDC5LQ99459 802 aaKnown RBP9.55□□□□□ -0.88
NR1I3-226ENST00000508740 TM6SF1Q9BZW5 370 aa9.55□□□□□ -0.88
NR1I3-226ENST00000508740 SLC27A2O14975 620 aa9.54□□□□□ -0.88
NR1I3-226ENST00000508740 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
NR1I3-226ENST00000508740 SLC5A1P13866 664 aa9.54□□□□□ -0.88
NR1I3-226ENST00000508740 SCARF1Q14162 830 aa9.54□□□□□ -0.88
NR1I3-226ENST00000508740 LRRFIP1Q32MZ4 808 aaKnown RBP9.54□□□□□ -0.88
NR1I3-226ENST00000508740 NBPF5PQ86XG9 351 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-226ENST00000508740 HELBQ8NG08 1087 aaPredicted RBP9.54□□□□□ -0.88
NR1I3-226ENST00000508740 TMX3Q96JJ7 454 aa9.54□□□□□ -0.88
NR1I3-226ENST00000508740 NLRP3Q96P20 1036 aa9.54□□□□□ -0.88
NR1I3-226ENST00000508740 SEC62Q99442 399 aaKnown RBP9.54□□□□□ -0.88
NR1I3-226ENST00000508740 UPF3BQ9BZI7 483 aaKnown RBP9.54□□□□□ -0.88
NR1I3-226ENST00000508740 TFCP2L1Q9NZI6 479 aa9.54□□□□□ -0.88
NR1I3-226ENST00000508740 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.53□□□□□ -0.88
NR1I3-226ENST00000508740 FRAT2O75474 233 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-226ENST00000508740 PHF14O94880 888 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 ZKSCAN1P17029 563 aaPredicted RBP9.53□□□□□ -0.88
NR1I3-226ENST00000508740 MCAMP43121 646 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 ZAP70P43403 619 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 CHRNDQ07001 517 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 ZNF827Q17R98 1081 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 TSGA10IPQ3SY00 556 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 RNF20Q5VTR2 975 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 CCDC102BQ68D86 513 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 DPY19L2Q6NUT2 758 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 CCDC129Q6ZRS4 1044 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 ANKRD18AQ8IVF6 992 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 FLAD1Q8NFF5 587 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 JAKMIP1Q96N16 626 aaKnown RBP9.53□□□□□ -0.88
NR1I3-226ENST00000508740 TTC14Q96N46 770 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 CWC22Q9HCG8 908 aaKnown RBP9.53□□□□□ -0.88
NR1I3-226ENST00000508740 ZSWIM6Q9HCJ5 1215 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 HMG20BQ9P0W2 317 aa9.53□□□□□ -0.88
NR1I3-226ENST00000508740 ZFYP08048 801 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-226ENST00000508740 CASTP20810 708 aaKnown RBP9.52□□□□□ -0.89
NR1I3-226ENST00000508740 PSMA5P28066 241 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 ARID4AP29374 1257 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-226ENST00000508740 PHKA1P46020 1223 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 CLCN6P51797 869 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 CUL4AQ13619 759 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 NFIXQ14938 502 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 TTF1Q15361 905 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-226ENST00000508740 SLFNL1Q499Z3 407 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 ASTLQ6HA08 431 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-226ENST00000508740 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-226ENST00000508740 BSDC1Q9NW68 430 aaPredicted RBP9.52□□□□□ -0.89
NR1I3-226ENST00000508740 CD2APQ9Y5K6 639 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 CYP46A1Q9Y6A2 500 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 AK9Q5TCS8 1911 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 BCORQ6W2J9 1755 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 PNPLA7Q6ZV29 1317 aa9.52□□□□□ -0.89
NR1I3-226ENST00000508740 LY75O60449 1722 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 SNAP23O00161 211 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 CYP2E1P05181 493 aaPredicted RBP9.51□□□□□ -0.89
NR1I3-226ENST00000508740 HSPA6P17066 643 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 RPS8P62241 208 aaKnown RBP9.51□□□□□ -0.89
NR1I3-226ENST00000508740 RAB3GAP1Q15042 981 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 ADCK5Q3MIX3 580 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 VPS53Q5VIR6 699 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 ZSCAN25Q6NSZ9 544 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 PI16Q6UXB8 463 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 RUFY3Q7L099 469 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 CELF1Q92879 486 aaKnown RBP9.51□□□□□ -0.89
NR1I3-226ENST00000508740 OSBP2Q969R2 916 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 INTS4Q96HW7 963 aaKnown RBP9.51□□□□□ -0.89
NR1I3-226ENST00000508740 DSCC1Q9BVC3 393 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.51□□□□□ -0.89
NR1I3-226ENST00000508740 PDRG1Q9NUG6 133 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 MINPP1Q9UNW1 487 aa9.51□□□□□ -0.89
NR1I3-226ENST00000508740 M0R2C6 588 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 HSPD1P10809 573 aaKnown RBP9.5□□□□□ -0.89
NR1I3-226ENST00000508740 CPA1P15085 419 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 TM4SF1P30408 202 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 AK2P54819 239 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 NUCB2P80303 420 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 UBE4AQ14139 1066 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 KRT32Q14532 448 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 ZGPATQ8N5A5 531 aaKnown RBP9.5□□□□□ -0.89
NR1I3-226ENST00000508740 SPATA5Q8NB90 893 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 APPBP2Q92624 585 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 TNPO1Q92973 898 aaKnown RBP9.5□□□□□ -0.89
NR1I3-226ENST00000508740 ALDH8A1Q9H2A2 487 aaPredicted RBP9.5□□□□□ -0.89
NR1I3-226ENST00000508740 PIH1D3Q9NQM4 214 aaKnown RBP9.5□□□□□ -0.89
NR1I3-226ENST00000508740 LIMCH1Q9UPQ0 1083 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 MYH3P11055 1940 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 C4BP0C0L5 1744 aa9.5□□□□□ -0.89
NR1I3-226ENST00000508740 MAST3O60307 1309 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms