RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 DCAF5Q96JK2 942 aa8.87□□□□□ -0.99
GYPA-205ENST00000508337 SETDB2Q96T68 719 aa8.87□□□□□ -0.99
GYPA-205ENST00000508337 CLEC4MQ9H2X3 399 aaPredicted RBP8.87□□□□□ -0.99
GYPA-205ENST00000508337 ZFYVE1Q9HBF4 777 aa8.87□□□□□ -0.99
GYPA-205ENST00000508337 SOX13Q9UN79 622 aa8.87□□□□□ -0.99
GYPA-205ENST00000508337 GIPC1O14908 333 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 FSCN2O14926 492 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 EIF4EBP3O60516 100 aaPredicted RBP8.86□□□□□ -0.99
GYPA-205ENST00000508337 BAG6P46379 1132 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 PCDH1Q08174 1060 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 ZNF326Q5BKZ1 582 aaKnown RBP8.86□□□□□ -0.99
GYPA-205ENST00000508337 PRPF40BQ6NWY9 871 aaKnown RBP8.86□□□□□ -0.99
GYPA-205ENST00000508337 KLHL23Q8NBE8 558 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 WNT8BQ93098 351 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 FRMD6Q96NE9 622 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 TCF12Q99081 682 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 SRCIN1Q9C0H9 1055 aa8.86□□□□□ -0.99
GYPA-205ENST00000508337 GPN3Q9UHW5 284 aaPredicted RBP8.86□□□□□ -0.99
GYPA-205ENST00000508337 TMEM238LA0A1B0GVL6 79 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 C9orf172C9J069 976 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 EIF4BP23588 611 aaKnown RBP8.85□□□□□ -0.99
GYPA-205ENST00000508337 GSTT1P30711 240 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 NRG1Q02297 640 aaPredicted RBP8.85□□□□□ -0.99
GYPA-205ENST00000508337 C19orf57Q0VDD7 668 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 PSMD2Q13200 908 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 SPRED3Q2MJR0 410 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 NXPE4Q6UWF7 544 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 DUSP9Q99956 384 aaKnown RBP8.85□□□□□ -0.99
GYPA-205ENST00000508337 AKAP2Q9Y2D5 859 aa8.85□□□□□ -0.99
GYPA-205ENST00000508337 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
GYPA-205ENST00000508337 GNA15P30679 374 aa8.84□□□□□ -0.99
GYPA-205ENST00000508337 GRIA4P48058 902 aa8.84□□□□□ -0.99
GYPA-205ENST00000508337 HNRNPUQ00839 825 aaKnown RBP eCLIP8.84□□□□□ -0.99
GYPA-205ENST00000508337 GSTM4Q03013 218 aa8.84□□□□□ -0.99
GYPA-205ENST00000508337 SETDB1Q15047 1291 aa8.84□□□□□ -0.99
GYPA-205ENST00000508337 GIPC2Q8TF65 315 aa8.84□□□□□ -0.99
GYPA-205ENST00000508337 ABCB6Q9NP58 842 aa8.84□□□□□ -0.99
GYPA-205ENST00000508337 OSGEPQ9NPF4 335 aa8.84□□□□□ -0.99
GYPA-205ENST00000508337 CD68P34810 354 aaPredicted RBP8.83□□□□□ -1
GYPA-205ENST00000508337 NLRP12P59046 1061 aa8.83□□□□□ -1
GYPA-205ENST00000508337 USP26Q9BXU7 913 aa8.83□□□□□ -1
GYPA-205ENST00000508337 MRPL18Q9H0U6 180 aaKnown RBP8.83□□□□□ -1
GYPA-205ENST00000508337 ZNF576Q9H609 170 aa8.83□□□□□ -1
GYPA-205ENST00000508337 C12orf49Q9H741 205 aa8.83□□□□□ -1
GYPA-205ENST00000508337 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
GYPA-205ENST00000508337 SUZ12Q15022 739 aaKnown RBP8.82□□□□□ -1
GYPA-205ENST00000508337 DUOXA2Q1HG44 320 aa8.82□□□□□ -1
GYPA-205ENST00000508337 IGF2-ASQ6U949 168 aa8.82□□□□□ -1
GYPA-205ENST00000508337 ACAD11Q709F0 780 aa8.82□□□□□ -1
GYPA-205ENST00000508337 VN1R5Q7Z5H4 357 aa8.82□□□□□ -1
GYPA-205ENST00000508337 FAM8A1Q9UBU6 413 aa8.82□□□□□ -1
GYPA-205ENST00000508337 DEAF1O75398 565 aaPredicted RBP8.81□□□□□ -1
GYPA-205ENST00000508337 ESRRAP11474 423 aaPredicted RBP8.81□□□□□ -1
GYPA-205ENST00000508337 PTPN12Q05209 780 aaKnown RBP8.81□□□□□ -1
GYPA-205ENST00000508337 SHISA2Q6UWI4 295 aa8.81□□□□□ -1
GYPA-205ENST00000508337 VTI1BQ9UEU0 232 aa8.81□□□□□ -1
GYPA-205ENST00000508337 PARP2Q9UGN5 583 aa8.81□□□□□ -1
GYPA-205ENST00000508337 TTF2Q9UNY4 1162 aaKnown RBP8.81□□□□□ -1
GYPA-205ENST00000508337 KRBA1A5PL33 1030 aa8.8□□□□□ -1
GYPA-205ENST00000508337 DLL1O00548 723 aa8.8□□□□□ -1
GYPA-205ENST00000508337 USP17L7P0C7H9 530 aa8.8□□□□□ -1
GYPA-205ENST00000508337 ITPKAP23677 461 aa8.8□□□□□ -1
GYPA-205ENST00000508337 HP1BP3Q5SSJ5 553 aaPredicted RBP8.8□□□□□ -1
GYPA-205ENST00000508337 ADAMTSL4Q6UY14 1074 aa8.8□□□□□ -1
GYPA-205ENST00000508337 KLHDC7BQ96G42 594 aa8.8□□□□□ -1
GYPA-205ENST00000508337 RPS26P11Q5JNZ5 115 aaPredicted RBP8.79□□□□□ -1
GYPA-205ENST00000508337 GPAT2Q6NUI2 795 aa8.79□□□□□ -1
GYPA-205ENST00000508337 GALNT11Q8NCW6 608 aa8.79□□□□□ -1
GYPA-205ENST00000508337 LENG1Q96BZ8 264 aaPredicted RBP8.79□□□□□ -1
GYPA-205ENST00000508337 CORO1BQ9BR76 489 aa8.79□□□□□ -1
GYPA-205ENST00000508337 SOX17Q9H6I2 414 aaPredicted RBP8.79□□□□□ -1
GYPA-205ENST00000508337 PODXL2Q9NZ53 605 aa8.79□□□□□ -1
GYPA-205ENST00000508337 SOX1O00570 391 aaPredicted RBP8.78□□□□□ -1
GYPA-205ENST00000508337 CYP11A1P05108 521 aa8.78□□□□□ -1
GYPA-205ENST00000508337 CHRNA4P43681 627 aa8.78□□□□□ -1
GYPA-205ENST00000508337 ZNF157P51786 506 aaPredicted RBP8.78□□□□□ -1
GYPA-205ENST00000508337 PLA2G4EQ3MJ16 856 aa8.78□□□□□ -1
GYPA-205ENST00000508337 FOXD4L6Q3SYB3 417 aaPredicted RBP8.78□□□□□ -1
GYPA-205ENST00000508337 FOXD4L3Q6VB84 417 aaPredicted RBP8.78□□□□□ -1
GYPA-205ENST00000508337 GLIS3Q8NEA6 775 aa8.78□□□□□ -1
GYPA-205ENST00000508337 CEP44Q9C0F1 390 aa8.78□□□□□ -1
GYPA-205ENST00000508337 C1QTNF9BB2RNN3 333 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 SORBS3O60504 671 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 SELPP16109 830 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 GLB1P16278 677 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 GATA4P43694 442 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 TPTE2Q6XPS3 522 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 FBXO33Q7Z6M2 555 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 RUSC1Q9BVN2 902 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 AKTIPQ9H8T0 292 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 PPM1HQ9ULR3 514 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 SAMM50Q9Y512 469 aa8.77□□□□□ -1.01
GYPA-205ENST00000508337 DDX3YO15523 660 aaKnown RBP8.76□□□□□ -1.01
GYPA-205ENST00000508337 B3GALT4O96024 378 aa8.76□□□□□ -1.01
GYPA-205ENST00000508337 LMNB1P20700 586 aa8.76□□□□□ -1.01
GYPA-205ENST00000508337 AP3B2Q13367 1082 aa8.76□□□□□ -1.01
GYPA-205ENST00000508337 PDE3AQ14432 1141 aa8.76□□□□□ -1.01
GYPA-205ENST00000508337 FDX2Q6P4F2 183 aa8.76□□□□□ -1.01
GYPA-205ENST00000508337 CD163Q86VB7 1156 aa8.76□□□□□ -1.01
GYPA-205ENST00000508337 TXNRD3Q86VQ6 643 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms