RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 ALX3O95076 343 aa9.33□□□□□ -0.92
DHFR-204ENST00000508282 WISP1O95388 367 aa9.33□□□□□ -0.92
DHFR-204ENST00000508282 IREB2P48200 963 aaKnown RBP9.33□□□□□ -0.92
DHFR-204ENST00000508282 IKBKEQ14164 716 aa9.33□□□□□ -0.92
DHFR-204ENST00000508282 SPRED3Q2MJR0 410 aa9.33□□□□□ -0.92
DHFR-204ENST00000508282 ZSCAN29Q8IWY8 852 aaPredicted RBP9.33□□□□□ -0.92
DHFR-204ENST00000508282 TMEM130Q8N3G9 435 aa9.33□□□□□ -0.92
DHFR-204ENST00000508282 EPS8L3Q8TE67 593 aaKnown RBP9.33□□□□□ -0.92
DHFR-204ENST00000508282 FOXD4L4Q8WXT5 416 aaPredicted RBP9.33□□□□□ -0.92
DHFR-204ENST00000508282 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
DHFR-204ENST00000508282 EHD4Q9H223 541 aa9.33□□□□□ -0.92
DHFR-204ENST00000508282 A0A096LPE4 126 aa9.32□□□□□ -0.92
DHFR-204ENST00000508282 A0A1W2PPZ6 126 aa9.32□□□□□ -0.92
DHFR-204ENST00000508282 SOX1O00570 391 aaPredicted RBP9.32□□□□□ -0.92
DHFR-204ENST00000508282 FURINP09958 794 aa9.32□□□□□ -0.92
DHFR-204ENST00000508282 ENOX2Q16206 610 aaKnown RBP9.32□□□□□ -0.92
DHFR-204ENST00000508282 SND1Q7KZF4 910 aaKnown RBP eCLIP9.32□□□□□ -0.92
DHFR-204ENST00000508282 SSBP4Q9BWG4 385 aaPredicted RBP9.32□□□□□ -0.92
DHFR-204ENST00000508282 AKTIPQ9H8T0 292 aa9.32□□□□□ -0.92
DHFR-204ENST00000508282 OSGEPQ9NPF4 335 aa9.32□□□□□ -0.92
DHFR-204ENST00000508282 PNMA6FA0A0J9YX94 578 aa9.31□□□□□ -0.92
DHFR-204ENST00000508282 FMR1Q06787 632 aaKnown RBP eCLIP9.31□□□□□ -0.92
DHFR-204ENST00000508282 SUZ12Q15022 739 aaKnown RBP9.31□□□□□ -0.92
DHFR-204ENST00000508282 PI16Q6UXB8 463 aa9.31□□□□□ -0.92
DHFR-204ENST00000508282 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.31□□□□□ -0.92
DHFR-204ENST00000508282 AGGF1Q8N302 714 aaeCLIP9.31□□□□□ -0.925e-13■■■□□ 18.9
DHFR-204ENST00000508282 ESRRAP11474 423 aaPredicted RBP9.3□□□□□ -0.92
DHFR-204ENST00000508282 C19orf57Q0VDD7 668 aa9.3□□□□□ -0.92
DHFR-204ENST00000508282 GRM2Q14416 872 aa9.3□□□□□ -0.92
DHFR-204ENST00000508282 UBASH3BQ8TF42 649 aa9.3□□□□□ -0.92
DHFR-204ENST00000508282 GADD45BO75293 160 aaPredicted RBP9.29□□□□□ -0.92
DHFR-204ENST00000508282 NLRP12P59046 1061 aa9.29□□□□□ -0.92
DHFR-204ENST00000508282 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
DHFR-204ENST00000508282 GLIS3Q8NEA6 775 aa9.29□□□□□ -0.92
DHFR-204ENST00000508282 MEGF10Q96KG7 1140 aa9.29□□□□□ -0.92
DHFR-204ENST00000508282 ABCB6Q9NP58 842 aa9.29□□□□□ -0.92
DHFR-204ENST00000508282 ARL4DP49703 201 aa9.28□□□□□ -0.92
DHFR-204ENST00000508282 RSPO4Q2I0M5 234 aaPredicted RBP9.28□□□□□ -0.92
DHFR-204ENST00000508282 ZNF423Q2M1K9 1284 aa9.28□□□□□ -0.92
DHFR-204ENST00000508282 NKAPLQ5M9Q1 402 aa9.28□□□□□ -0.92
DHFR-204ENST00000508282 PRPF40BQ6NWY9 871 aaKnown RBP9.28□□□□□ -0.92
DHFR-204ENST00000508282 Q6ZS46 218 aa9.28□□□□□ -0.92
DHFR-204ENST00000508282 KIAA1211Q6ZU35 1233 aa9.28□□□□□ -0.92
DHFR-204ENST00000508282 SETDB2Q96T68 719 aa9.28□□□□□ -0.92
DHFR-204ENST00000508282 CLEC4MQ9H2X3 399 aaPredicted RBP9.28□□□□□ -0.92
DHFR-204ENST00000508282 SOX17Q9H6I2 414 aaPredicted RBP9.28□□□□□ -0.92
DHFR-204ENST00000508282 ADAM23O75077 832 aa9.27□□□□□ -0.93
DHFR-204ENST00000508282 ITPKAP23677 461 aa9.27□□□□□ -0.93
DHFR-204ENST00000508282 MAPK8P45983 427 aa9.27□□□□□ -0.93
DHFR-204ENST00000508282 PCDH1Q08174 1060 aa9.27□□□□□ -0.93
DHFR-204ENST00000508282 DUOXA2Q1HG44 320 aa9.27□□□□□ -0.93
DHFR-204ENST00000508282 DZIP1LQ8IYY4 767 aaKnown RBP9.27□□□□□ -0.93
DHFR-204ENST00000508282 ZNF576Q9H609 170 aa9.27□□□□□ -0.93
DHFR-204ENST00000508282 TMEM238LA0A1B0GVL6 79 aa9.26□□□□□ -0.93
DHFR-204ENST00000508282 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.26□□□□□ -0.931e-10■■■□□ 15.9
DHFR-204ENST00000508282 TP53INP1Q96A56 240 aa9.26□□□□□ -0.93
DHFR-204ENST00000508282 NLRP2Q9NX02 1062 aa9.26□□□□□ -0.93
DHFR-204ENST00000508282 TRAK1Q9UPV9 953 aa9.26□□□□□ -0.93
DHFR-204ENST00000508282 K7ELQ4 463 aaPredicted RBP9.25□□□□□ -0.93
DHFR-204ENST00000508282 P4HBP07237 508 aaKnown RBP9.25□□□□□ -0.93
DHFR-204ENST00000508282 WWC3Q9ULE0 1092 aa9.25□□□□□ -0.93
DHFR-204ENST00000508282 GSTM4Q03013 218 aa9.24□□□□□ -0.93
DHFR-204ENST00000508282 PTPN12Q05209 780 aaKnown RBP9.24□□□□□ -0.93
DHFR-204ENST00000508282 BCO2Q9BYV7 579 aa9.24□□□□□ -0.93
DHFR-204ENST00000508282 B3GALT4O96024 378 aa9.23□□□□□ -0.93
DHFR-204ENST00000508282 GLB1P16278 677 aa9.23□□□□□ -0.93
DHFR-204ENST00000508282 ITGB7P26010 798 aa9.23□□□□□ -0.93
DHFR-204ENST00000508282 FBF1Q8TES7 1133 aa9.23□□□□□ -0.93
DHFR-204ENST00000508282 UBL7Q96S82 380 aaPredicted RBP9.23□□□□□ -0.93
DHFR-204ENST00000508282 NRSN2Q9GZP1 204 aa9.23□□□□□ -0.93
DHFR-204ENST00000508282 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
DHFR-204ENST00000508282 LOC100289279A0A1B0GTE1 492 aa9.22□□□□□ -0.93
DHFR-204ENST00000508282 ANKRD33BA6NCL7 494 aa9.22□□□□□ -0.93
DHFR-204ENST00000508282 DLGAP3O95886 979 aa9.22□□□□□ -0.93
DHFR-204ENST00000508282 NXPE4Q6UWF7 544 aa9.22□□□□□ -0.93
DHFR-204ENST00000508282 USP26Q9BXU7 913 aa9.22□□□□□ -0.93
DHFR-204ENST00000508282 GZF1Q9H116 711 aaPredicted RBP9.22□□□□□ -0.93
DHFR-204ENST00000508282 DYRK3O43781 588 aa9.21□□□□□ -0.94
DHFR-204ENST00000508282 H2AFB1P0C5Y9 115 aa9.21□□□□□ -0.94
DHFR-204ENST00000508282 H2AFB2P0C5Z0 115 aa9.21□□□□□ -0.94
DHFR-204ENST00000508282 FCGRTP55899 365 aa9.21□□□□□ -0.94
DHFR-204ENST00000508282 FAAP100Q0VG06 881 aa9.21□□□□□ -0.94
DHFR-204ENST00000508282 ALG1LQ6GMV1 187 aa9.21□□□□□ -0.94
DHFR-204ENST00000508282 DNAJC14Q6Y2X3 702 aaPredicted RBP9.21□□□□□ -0.94
DHFR-204ENST00000508282 RPS26P11Q5JNZ5 115 aaPredicted RBP9.2□□□□□ -0.94
DHFR-204ENST00000508282 DTHD1Q6ZMT9 781 aa9.2□□□□□ -0.94
DHFR-204ENST00000508282 TRIM56Q9BRZ2 755 aaKnown RBP9.2□□□□□ -0.94
DHFR-204ENST00000508282 RUSC1Q9BVN2 902 aa9.2□□□□□ -0.94
DHFR-204ENST00000508282 RNF208Q9H0X6 261 aa9.2□□□□□ -0.94
DHFR-204ENST00000508282 MEGF11A6BM72 1044 aa9.19□□□□□ -0.94
DHFR-204ENST00000508282 ATP2B2Q01814 1243 aa9.19□□□□□ -0.94
DHFR-204ENST00000508282 CEP41Q9BYV8 373 aa9.19□□□□□ -0.94
DHFR-204ENST00000508282 OSBPL7Q9BZF2 842 aa9.19□□□□□ -0.94
DHFR-204ENST00000508282 PPP4R2Q9NY27 417 aa9.19□□□□□ -0.94
DHFR-204ENST00000508282 EIF4EBP3O60516 100 aaPredicted RBP9.18□□□□□ -0.94
DHFR-204ENST00000508282 LDHBP07195 334 aaKnown RBP9.18□□□□□ -0.94
DHFR-204ENST00000508282 MAOBP27338 520 aa9.18□□□□□ -0.94
DHFR-204ENST00000508282 ARMC10Q8N2F6 343 aa9.18□□□□□ -0.94
DHFR-204ENST00000508282 FAM46AQ96IP4 442 aaKnown RBP9.18□□□□□ -0.94
DHFR-204ENST00000508282 TMPRSS13Q9BYE2 586 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 204.3 ms