RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 RAB3GAP1Q15042 981 aa19.8■□□□□ 0.76
DDX41-207ENST00000507900 CAVIN4Q5BKX8 364 aa19.8■□□□□ 0.76
DDX41-207ENST00000507900 FBXO33Q7Z6M2 555 aa19.8■□□□□ 0.76
DDX41-207ENST00000507900 PUS7LQ9H0K6 701 aaKnown RBP19.8■□□□□ 0.76
DDX41-207ENST00000507900 PDRG1Q9NUG6 133 aa19.8■□□□□ 0.76
DDX41-207ENST00000507900 COL1A1P02452 1464 aaPredicted RBP19.8■□□□□ 0.76
DDX41-207ENST00000507900 IRS2Q9Y4H2 1338 aa19.79■□□□□ 0.76
DDX41-207ENST00000507900 FOXP2O15409 715 aa19.79■□□□□ 0.76
DDX41-207ENST00000507900 MAP3K12Q12852 859 aa19.79■□□□□ 0.76
DDX41-207ENST00000507900 RPGRQ92834 1020 aaKnown RBP19.79■□□□□ 0.76
DDX41-207ENST00000507900 FOXD4L1Q9NU39 408 aa19.79■□□□□ 0.76
DDX41-207ENST00000507900 LIMCH1Q9UPQ0 1083 aa19.79■□□□□ 0.76
DDX41-207ENST00000507900 TAF6LQ9Y6J9 622 aa19.79■□□□□ 0.76
DDX41-207ENST00000507900 ZNF532Q9HCE3 1301 aa19.79■□□□□ 0.76
DDX41-207ENST00000507900 GPAA1O43292 621 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 RPS6KB1P23443 525 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 HOXA10P31260 410 aaPredicted RBP19.78■□□□□ 0.76
DDX41-207ENST00000507900 GYG1P46976 350 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 BLOC1S2Q6QNY1 142 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 FAM84BQ96KN1 310 aaPredicted RBP19.78■□□□□ 0.76
DDX41-207ENST00000507900 WWC3Q9ULE0 1092 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 PNPLA7Q6ZV29 1317 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 CPA1P15085 419 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 CTNNA3Q9UI47 895 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 MAST2Q6P0Q8 1798 aa19.78■□□□□ 0.76
DDX41-207ENST00000507900 LTBP1Q14766 1721 aa19.77■□□□□ 0.76
DDX41-207ENST00000507900 WTIPA6NIX2 430 aaPredicted RBP19.77■□□□□ 0.76
DDX41-207ENST00000507900 ZGPATQ8N5A5 531 aaKnown RBP19.77■□□□□ 0.76
DDX41-207ENST00000507900 RBM17Q96I25 401 aaKnown RBP19.77■□□□□ 0.76
DDX41-207ENST00000507900 NEK1Q96PY6 1258 aa19.77■□□□□ 0.76
DDX41-207ENST00000507900 DENND2AQ9ULE3 1009 aa19.77■□□□□ 0.76
DDX41-207ENST00000507900 LEMD3Q9Y2U8 911 aa19.77■□□□□ 0.76
DDX41-207ENST00000507900 CACNA1SQ13698 1873 aa19.77■□□□□ 0.76
DDX41-207ENST00000507900 FRAT2O75474 233 aaPredicted RBP19.76■□□□□ 0.75
DDX41-207ENST00000507900 NUCB2P80303 420 aa19.76■□□□□ 0.75
DDX41-207ENST00000507900 ZSCAN31Q96LW9 406 aaPredicted RBP19.76■□□□□ 0.75
DDX41-207ENST00000507900 CRAMP1Q96RY5 1269 aa19.76■□□□□ 0.75
DDX41-207ENST00000507900 XDHP47989 1333 aa19.75■□□□□ 0.75
DDX41-207ENST00000507900 HMGB1P09429 215 aaKnown RBP19.75■□□□□ 0.75
DDX41-207ENST00000507900 ANKRD1Q15327 319 aa19.75■□□□□ 0.75
DDX41-207ENST00000507900 C15orf52Q6ZUT6 534 aaKnown RBP19.75■□□□□ 0.75
DDX41-207ENST00000507900 CAMKK2Q96RR4 588 aa19.75■□□□□ 0.75
DDX41-207ENST00000507900 SH2B1Q9NRF2 756 aaPredicted RBP19.75■□□□□ 0.75
DDX41-207ENST00000507900 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
DDX41-207ENST00000507900 ZMYM6O95789 1325 aa19.75■□□□□ 0.75
DDX41-207ENST00000507900 NOL8Q76FK4 1167 aaKnown RBP19.74■□□□□ 0.75
DDX41-207ENST00000507900 VPS37DQ86XT2 251 aa19.74■□□□□ 0.75
DDX41-207ENST00000507900 MAGEB6Q8N7X4 407 aa19.74■□□□□ 0.75
DDX41-207ENST00000507900 BBOX1O75936 387 aa19.74■□□□□ 0.75
DDX41-207ENST00000507900 KLRK1P26718 216 aa19.74■□□□□ 0.75
DDX41-207ENST00000507900 HIBADHP31937 336 aaKnown RBP19.74■□□□□ 0.75
DDX41-207ENST00000507900 STOX1Q6ZVD7 989 aa19.74■□□□□ 0.75
DDX41-207ENST00000507900 TMC4Q7Z404 712 aa19.74■□□□□ 0.75
DDX41-207ENST00000507900 BRIP1Q9BX63 1249 aa19.74■□□□□ 0.75
DDX41-207ENST00000507900 COL11A2P13942 1736 aaPredicted RBP19.73■□□□□ 0.75
DDX41-207ENST00000507900 FGAP02671 866 aa19.73■□□□□ 0.75
DDX41-207ENST00000507900 COL9A3Q14050 684 aaPredicted RBP19.73■□□□□ 0.75
DDX41-207ENST00000507900 CLEC17AQ6ZS10 378 aa19.73■□□□□ 0.75
DDX41-207ENST00000507900 TNPO1Q92973 898 aaKnown RBP19.73■□□□□ 0.75
DDX41-207ENST00000507900 STRBPQ96SI9 672 aaKnown RBP19.73■□□□□ 0.75
DDX41-207ENST00000507900 DUOX1Q9NRD9 1551 aa19.73■□□□□ 0.75
DDX41-207ENST00000507900 CCDC88AQ3V6T2 1871 aa19.72■□□□□ 0.75
DDX41-207ENST00000507900 IGSF3O75054 1194 aa19.72■□□□□ 0.75
DDX41-207ENST00000507900 ALX1Q15699 326 aa19.72■□□□□ 0.75
DDX41-207ENST00000507900 IMMTQ16891 758 aaKnown RBP19.72■□□□□ 0.75
DDX41-207ENST00000507900 TMED8Q6PL24 325 aaPredicted RBP19.72■□□□□ 0.75
DDX41-207ENST00000507900 LRP2BPQ9P2M1 347 aa19.72■□□□□ 0.75
DDX41-207ENST00000507900 E7EWF7 191 aa19.71■□□□□ 0.75
DDX41-207ENST00000507900 TOB2Q14106 344 aaPredicted RBP19.71■□□□□ 0.75
DDX41-207ENST00000507900 TTLL5Q6EMB2 1281 aa19.71■□□□□ 0.75
DDX41-207ENST00000507900 AIDAQ96BJ3 306 aa19.71■□□□□ 0.75
DDX41-207ENST00000507900 ANKIB1Q9P2G1 1089 aa19.71■□□□□ 0.75
DDX41-207ENST00000507900 IQSEC3Q9UPP2 1182 aaPredicted RBP19.71■□□□□ 0.75
DDX41-207ENST00000507900 TIAM2Q8IVF5 1701 aa19.71■□□□□ 0.75
DDX41-207ENST00000507900 LARGE1O95461 756 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 EZH2Q15910 746 aaKnown RBP19.7■□□□□ 0.74
DDX41-207ENST00000507900 DHX32Q7L7V1 743 aaKnown RBP19.7■□□□□ 0.74
DDX41-207ENST00000507900 PODXL2Q9NZ53 605 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.7■□□□□ 0.74
DDX41-207ENST00000507900 CHD4Q14839 1912 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 A0A0G2JLW4 131 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 MMP10P09238 476 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 GNAT2P19087 354 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 ATP2B4P23634 1241 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 MCM4P33991 863 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 SLC15A2Q16348 729 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 AGXT2Q9BYV1 514 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 ANO8Q9HCE9 1232 aaPredicted RBP19.7■□□□□ 0.74
DDX41-207ENST00000507900 TPCN1Q9ULQ1 816 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 PARP3Q9Y6F1 533 aa19.7■□□□□ 0.74
DDX41-207ENST00000507900 MBD4O95243 580 aa19.69■□□□□ 0.74
DDX41-207ENST00000507900 GPSM2P81274 684 aa19.69■□□□□ 0.74
DDX41-207ENST00000507900 EXOSC10Q01780 885 aaKnown RBP19.69■□□□□ 0.74
DDX41-207ENST00000507900 EN1Q05925 392 aaPredicted RBP19.69■□□□□ 0.74
DDX41-207ENST00000507900 ME3Q16798 604 aa19.69■□□□□ 0.74
DDX41-207ENST00000507900 TXNRD3Q86VQ6 643 aa19.69■□□□□ 0.74
DDX41-207ENST00000507900 FBXL16Q8N461 479 aa19.69■□□□□ 0.74
DDX41-207ENST00000507900 PATL2C9JE40 543 aaKnown RBP19.68■□□□□ 0.74
DDX41-207ENST00000507900 SRGNP10124 158 aa19.68■□□□□ 0.74
DDX41-207ENST00000507900 GBP4Q96PP9 640 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms