RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 RTFDC1Q9BY42 306 aaPredicted RBP21.13■□□□□ 0.97
RNF4-209ENST00000507784 PIH1D3Q9NQM4 214 aaKnown RBP21.13■□□□□ 0.97
RNF4-209ENST00000507784 MYO5AQ9Y4I1 1855 aaKnown RBP21.12■□□□□ 0.97
RNF4-209ENST00000507784 MFAP1P55081 439 aaKnown RBP21.12■□□□□ 0.97
RNF4-209ENST00000507784 LRRFIP1Q32MZ4 808 aaKnown RBP21.12■□□□□ 0.97
RNF4-209ENST00000507784 CWC27Q6UX04 472 aaKnown RBP21.12■□□□□ 0.97
RNF4-209ENST00000507784 COA1Q9GZY4 146 aa21.12■□□□□ 0.97
RNF4-209ENST00000507784 JAG2Q9Y219 1238 aa21.12■□□□□ 0.97
RNF4-209ENST00000507784 IDH1O75874 414 aaKnown RBP21.11■□□□□ 0.97
RNF4-209ENST00000507784 SEC24BO95487 1268 aa21.11■□□□□ 0.97
RNF4-209ENST00000507784 RUFY2Q8WXA3 655 aa21.11■□□□□ 0.97
RNF4-209ENST00000507784 FBXW7Q969H0 707 aa21.11■□□□□ 0.97
RNF4-209ENST00000507784 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.11■□□□□ 0.97
RNF4-209ENST00000507784 LRP2BPQ9P2M1 347 aa21.11■□□□□ 0.97
RNF4-209ENST00000507784 ABCF2Q9UG63 623 aa21.11■□□□□ 0.97
RNF4-209ENST00000507784 MYH7P12883 1935 aa21.11■□□□□ 0.97
RNF4-209ENST00000507784 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
RNF4-209ENST00000507784 IL1R1P14778 569 aa21.1■□□□□ 0.97
RNF4-209ENST00000507784 NMIQ13287 307 aaPredicted RBP21.1■□□□□ 0.97
RNF4-209ENST00000507784 AOC3Q16853 763 aa21.1■□□□□ 0.97
RNF4-209ENST00000507784 ZSCAN25Q6NSZ9 544 aa21.1■□□□□ 0.97
RNF4-209ENST00000507784 ESYT1Q9BSJ8 1104 aa21.1■□□□□ 0.97
RNF4-209ENST00000507784 COL1A1P02452 1464 aaPredicted RBP21.09■□□□□ 0.97
RNF4-209ENST00000507784 RNF113AO15541 343 aaKnown RBP21.09■□□□□ 0.97
RNF4-209ENST00000507784 EIF5BO60841 1220 aaKnown RBP21.09■□□□□ 0.97
RNF4-209ENST00000507784 PSMD1Q99460 953 aa21.09■□□□□ 0.97
RNF4-209ENST00000507784 SYT17Q9BSW7 474 aa21.09■□□□□ 0.97
RNF4-209ENST00000507784 DBNDD1Q9H9R9 158 aa21.09■□□□□ 0.97
RNF4-209ENST00000507784 RAI14Q9P0K7 980 aa21.09■□□□□ 0.97
RNF4-209ENST00000507784 MAP3K12Q12852 859 aa21.08■□□□□ 0.97
RNF4-209ENST00000507784 WDR66Q8TBY9 1149 aa21.08■□□□□ 0.97
RNF4-209ENST00000507784 SNED1Q8TER0 1413 aa21.08■□□□□ 0.97
RNF4-209ENST00000507784 FAM227BQ96M60 508 aa21.08■□□□□ 0.97
RNF4-209ENST00000507784 UPF2Q9HAU5 1272 aaKnown RBP21.08■□□□□ 0.97
RNF4-209ENST00000507784 ZNF277Q9NRM2 450 aaPredicted RBP21.08■□□□□ 0.97
RNF4-209ENST00000507784 RFX7Q2KHR2 1363 aa21.08■□□□□ 0.96
RNF4-209ENST00000507784 PDS5AQ29RF7 1337 aaKnown RBP21.07■□□□□ 0.96
RNF4-209ENST00000507784 ARFGEF1Q9Y6D6 1849 aa21.07■□□□□ 0.96
RNF4-209ENST00000507784 CHGBP05060 677 aa21.07■□□□□ 0.96
RNF4-209ENST00000507784 GTF2IP78347 998 aa21.07■□□□□ 0.96
RNF4-209ENST00000507784 KIAA2012Q0VF49 1180 aa21.07■□□□□ 0.96
RNF4-209ENST00000507784 SLFNL1Q499Z3 407 aa21.07■□□□□ 0.96
RNF4-209ENST00000507784 ERICH6Q7L0X2 663 aa21.07■□□□□ 0.96
RNF4-209ENST00000507784 DOCK2Q92608 1830 aa21.06■□□□□ 0.96
RNF4-209ENST00000507784 CHD4Q14839 1912 aa21.06■□□□□ 0.96
RNF4-209ENST00000507784 ECE2O60344 883 aa21.06■□□□□ 0.96
RNF4-209ENST00000507784 ZFYP08048 801 aaPredicted RBP21.06■□□□□ 0.96
RNF4-209ENST00000507784 SLC9C2Q5TAH2 1124 aa21.06■□□□□ 0.96
RNF4-209ENST00000507784 SPTY2D1Q68D10 685 aaPredicted RBP21.06■□□□□ 0.96
RNF4-209ENST00000507784 LARGE2Q8N3Y3 721 aa21.06■□□□□ 0.96
RNF4-209ENST00000507784 ZGPATQ8N5A5 531 aaKnown RBP21.06■□□□□ 0.96
RNF4-209ENST00000507784 TAOK3Q9H2K8 898 aa21.06■□□□□ 0.96
RNF4-209ENST00000507784 FER1L6Q2WGJ9 1857 aa21.05■□□□□ 0.96
RNF4-209ENST00000507784 A0A0D9SFI3 127 aa21.05■□□□□ 0.96
RNF4-209ENST00000507784 ZBTB22O15209 634 aa21.05■□□□□ 0.96
RNF4-209ENST00000507784 PODNQ7Z5L7 613 aa21.05■□□□□ 0.96
RNF4-209ENST00000507784 TICAM2Q86XR7 235 aa21.05■□□□□ 0.96
RNF4-209ENST00000507784 MAGEB6Q8N7X4 407 aa21.05■□□□□ 0.96
RNF4-209ENST00000507784 SGSM2O43147 1006 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 PDE6AP16499 860 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 ADD2P35612 726 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 MCMDC2Q4G0Z9 681 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 TTLL5Q6EMB2 1281 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 KIAA1211Q6ZU35 1233 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 SEC62Q99442 399 aaKnown RBP21.04■□□□□ 0.96
RNF4-209ENST00000507784 TSHZ2Q9NRE2 1034 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 HELLSQ9NRZ9 838 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 CCDC88AQ3V6T2 1871 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 ZNF532Q9HCE3 1301 aa21.04■□□□□ 0.96
RNF4-209ENST00000507784 REC8O95072 547 aa21.03■□□□□ 0.96
RNF4-209ENST00000507784 IARSP41252 1262 aaKnown RBP21.03■□□□□ 0.96
RNF4-209ENST00000507784 ZMYM1Q5SVZ6 1142 aa21.03■□□□□ 0.96
RNF4-209ENST00000507784 ARHGAP27Q6ZUM4 889 aa21.03■□□□□ 0.96
RNF4-209ENST00000507784 VPS33BQ9H267 617 aa21.03■□□□□ 0.96
RNF4-209ENST00000507784 ANO2Q9NQ90 1003 aa21.03■□□□□ 0.96
RNF4-209ENST00000507784 FAM205AQ6ZU69 1335 aa21.03■□□□□ 0.96
RNF4-209ENST00000507784 LDHBP07195 334 aaKnown RBP21.02■□□□□ 0.96
RNF4-209ENST00000507784 CYP7A1P22680 504 aa21.02■□□□□ 0.96
RNF4-209ENST00000507784 TBC1D22AQ8WUA7 517 aa21.02■□□□□ 0.96
RNF4-209ENST00000507784 APPBP2Q92624 585 aa21.02■□□□□ 0.96
RNF4-209ENST00000507784 IL25Q9H293 177 aa21.02■□□□□ 0.96
RNF4-209ENST00000507784 RAD50Q92878 1312 aa21.02■□□□□ 0.95
RNF4-209ENST00000507784 SALL1Q9NSC2 1324 aa21.02■□□□□ 0.95
RNF4-209ENST00000507784 NFKBIEO00221 500 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 PRDX5P30044 214 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 RASSF7Q02833 373 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 UBE3CQ15386 1083 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 MFSD14BQ5SR56 506 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 NAA16Q6N069 864 aaPredicted RBP21.01■□□□□ 0.95
RNF4-209ENST00000507784 CCDC129Q6ZRS4 1044 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 DZIP1Q86YF9 867 aaKnown RBP21.01■□□□□ 0.95
RNF4-209ENST00000507784 NIM1KQ8IY84 436 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 KCNQ5Q9NR82 932 aa21.01■□□□□ 0.95
RNF4-209ENST00000507784 M0R2C6 588 aa21■□□□□ 0.95
RNF4-209ENST00000507784 OSBP2Q969R2 916 aa21■□□□□ 0.95
RNF4-209ENST00000507784 MECOMQ03112 1051 aa20.99■□□□□ 0.95
RNF4-209ENST00000507784 MXD3Q9BW11 206 aa20.99■□□□□ 0.95
RNF4-209ENST00000507784 PUS7LQ9H0K6 701 aaKnown RBP20.99■□□□□ 0.95
RNF4-209ENST00000507784 MAST3O60307 1309 aa20.99■□□□□ 0.95
RNF4-209ENST00000507784 TCRBV5S4A2TA0A5A2 114 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms