RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 TYRO3Q06418 890 aa25.86■■□□□ 1.73
SPCS3-203ENST00000507678 TTC12Q9H892 705 aaPredicted RBP25.86■■□□□ 1.73
SPCS3-203ENST00000507678 ATP6V1AP38606 617 aa25.86■■□□□ 1.73
SPCS3-203ENST00000507678 DISP2A7MBM2 1401 aa25.86■■□□□ 1.73
SPCS3-203ENST00000507678 NUTM2BA6NNL0 878 aaPredicted RBP25.85■■□□□ 1.73
SPCS3-203ENST00000507678 GOLGA8BA8MQT2 603 aa25.85■■□□□ 1.73
SPCS3-203ENST00000507678 NUTM2EB1AL46 878 aaPredicted RBP25.85■■□□□ 1.73
SPCS3-203ENST00000507678 LUZP1Q86V48 1076 aa25.85■■□□□ 1.73
SPCS3-203ENST00000507678 NUTM2AQ8IVF1 878 aaPredicted RBP25.85■■□□□ 1.73
SPCS3-203ENST00000507678 CFAP45Q9UL16 551 aa25.85■■□□□ 1.73
SPCS3-203ENST00000507678 SUSD4Q5VX71 490 aa25.85■■□□□ 1.73
SPCS3-203ENST00000507678 VGLL2Q8N8G2 317 aa25.85■■□□□ 1.73
SPCS3-203ENST00000507678 SPC24Q8NBT2 197 aa25.85■■□□□ 1.73
SPCS3-203ENST00000507678 SEC31BQ9NQW1 1179 aa25.85■■□□□ 1.73
SPCS3-203ENST00000507678 R3HCC1Q9Y3T6 440 aaKnown RBP25.85■■□□□ 1.73
SPCS3-203ENST00000507678 IL6STP40189 918 aaPredicted RBP25.84■■□□□ 1.73
SPCS3-203ENST00000507678 ZNF274Q96GC6 653 aaPredicted RBP25.84■■□□□ 1.73
SPCS3-203ENST00000507678 GJB4Q9NTQ9 266 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 WWC3Q9ULE0 1092 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 KIF3AQ9Y496 699 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.84■■□□□ 1.73
SPCS3-203ENST00000507678 OFD1O75665 1012 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 MCM5P33992 734 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 USP28Q96RU2 1077 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 MRVI1Q9Y6F6 885 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 ZNF532Q9HCE3 1301 aa25.84■■□□□ 1.73
SPCS3-203ENST00000507678 ADD2P35612 726 aa25.83■■□□□ 1.73
SPCS3-203ENST00000507678 DDB1Q16531 1140 aa25.83■■□□□ 1.73
SPCS3-203ENST00000507678 NCOA7Q8NI08 942 aa25.83■■□□□ 1.73
SPCS3-203ENST00000507678 ZNF500O60304 480 aaPredicted RBP25.83■■□□□ 1.73
SPCS3-203ENST00000507678 ANO6Q4KMQ2 910 aa25.83■■□□□ 1.73
SPCS3-203ENST00000507678 CARMIL3Q8ND23 1372 aa25.82■■□□□ 1.72
SPCS3-203ENST00000507678 RXRAP19793 462 aa25.82■■□□□ 1.72
SPCS3-203ENST00000507678 NKX2-3Q8TAU0 364 aa25.82■■□□□ 1.72
SPCS3-203ENST00000507678 FDPSP14324 419 aaKnown RBP25.82■■□□□ 1.72
SPCS3-203ENST00000507678 ANTXR2P58335 489 aa25.82■■□□□ 1.72
SPCS3-203ENST00000507678 NAA16Q6N069 864 aaPredicted RBP25.82■■□□□ 1.72
SPCS3-203ENST00000507678 MPHOSPH8Q99549 860 aa25.82■■□□□ 1.72
SPCS3-203ENST00000507678 CRKLP46109 303 aaKnown RBP25.81■■□□□ 1.72
SPCS3-203ENST00000507678 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.81■■□□□ 1.72
SPCS3-203ENST00000507678 DDX19AQ9NUU7 478 aaKnown RBP25.81■■□□□ 1.72
SPCS3-203ENST00000507678 ADD1P35611 737 aaKnown RBP25.81■■□□□ 1.72
SPCS3-203ENST00000507678 MB21D2Q8IYB1 491 aaPredicted RBP25.81■■□□□ 1.72
SPCS3-203ENST00000507678 ZNF34Q8IZ26 560 aa25.81■■□□□ 1.72
SPCS3-203ENST00000507678 C17orf53Q8N3J3 647 aaPredicted RBP25.81■■□□□ 1.72
SPCS3-203ENST00000507678 CLSTN2Q9H4D0 955 aa25.81■■□□□ 1.72
SPCS3-203ENST00000507678 INCENPQ9NQS7 918 aa25.81■■□□□ 1.72
SPCS3-203ENST00000507678 LRP6O75581 1613 aa25.81■■□□□ 1.72
SPCS3-203ENST00000507678 CPLX1O14810 134 aa25.81■■□□□ 1.72
SPCS3-203ENST00000507678 POLR3DP05423 398 aaPredicted RBP25.81■■□□□ 1.72
SPCS3-203ENST00000507678 TICAM2Q86XR7 235 aa25.81■■□□□ 1.72
SPCS3-203ENST00000507678 STK11IPQ8N1F8 1099 aa25.81■■□□□ 1.72
SPCS3-203ENST00000507678 ERVV-1B6SEH8 477 aa25.8■■□□□ 1.72
SPCS3-203ENST00000507678 SPEF2Q9C093 1822 aa25.8■■□□□ 1.72
SPCS3-203ENST00000507678 SALL1Q9NSC2 1324 aa25.8■■□□□ 1.72
SPCS3-203ENST00000507678 TRDNQ13061 729 aa25.8■■□□□ 1.72
SPCS3-203ENST00000507678 PUM3Q15397 648 aaKnown RBP25.8■■□□□ 1.72
SPCS3-203ENST00000507678 NWD2Q9ULI1 1742 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 PDE6AP16499 860 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 ME1P48163 572 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 ZSCAN25Q6NSZ9 544 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 INTS5Q6P9B9 1019 aaKnown RBP25.79■■□□□ 1.72
SPCS3-203ENST00000507678 TBC1D10CQ8IV04 446 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 CCAR1Q8IX12 1150 aaKnown RBP25.79■■□□□ 1.72
SPCS3-203ENST00000507678 CCDC144CPQ8IYA2 1237 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 FAM200AQ8TCP9 573 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 CCDC87Q9NVE4 849 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 RBM10P98175 930 aaKnown RBP25.79■■□□□ 1.72
SPCS3-203ENST00000507678 SASS6Q6UVJ0 657 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 NBPF3Q9H094 633 aa25.79■■□□□ 1.72
SPCS3-203ENST00000507678 A0A087WWV3 80 aa25.78■■□□□ 1.72
SPCS3-203ENST00000507678 TTF1Q15361 905 aaPredicted RBP25.78■■□□□ 1.72
SPCS3-203ENST00000507678 ILDR1Q86SU0 546 aaPredicted RBP25.78■■□□□ 1.72
SPCS3-203ENST00000507678 AIDAQ96BJ3 306 aa25.78■■□□□ 1.72
SPCS3-203ENST00000507678 DNAJC25Q9H1X3 360 aa25.78■■□□□ 1.72
SPCS3-203ENST00000507678 ORC3Q9UBD5 711 aaPredicted RBP25.78■■□□□ 1.72
SPCS3-203ENST00000507678 PRDM4Q9UKN5 801 aa25.78■■□□□ 1.72
SPCS3-203ENST00000507678 EIF5P55010 431 aaKnown RBP25.78■■□□□ 1.72
SPCS3-203ENST00000507678 LPIN2Q92539 896 aa25.78■■□□□ 1.72
SPCS3-203ENST00000507678 FBXW7Q969H0 707 aa25.78■■□□□ 1.72
SPCS3-203ENST00000507678 IQSEC3Q9UPP2 1182 aaPredicted RBP25.78■■□□□ 1.72
SPCS3-203ENST00000507678 HPS5Q9UPZ3 1129 aa25.78■■□□□ 1.72
SPCS3-203ENST00000507678 NUP98P52948 1817 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 B4E1Z4 1266 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 KIAA2012Q0VF49 1180 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 GOLPH3LQ9H4A5 285 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 CBX8Q9HC52 389 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 NIP7Q9Y221 180 aaKnown RBP eCLIP25.77■■□□□ 1.72
SPCS3-203ENST00000507678 LOC102724428A0A0B4J2F2 783 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 KCNQ4P56696 695 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 SIK1P57059 783 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 MAGEB6Q8N7X4 407 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 ERCC4Q92889 916 aaPredicted RBP25.77■■□□□ 1.72
SPCS3-203ENST00000507678 C8orf76Q96K31 380 aa25.77■■□□□ 1.72
SPCS3-203ENST00000507678 ITPK1Q13572 414 aa25.76■■□□□ 1.71
SPCS3-203ENST00000507678 UTP14AQ9BVJ6 771 aaKnown RBP25.76■■□□□ 1.71
SPCS3-203ENST00000507678 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
SPCS3-203ENST00000507678 RASGRF1Q13972 1273 aa25.76■■□□□ 1.71
SPCS3-203ENST00000507678 DNTTIP2Q5QJE6 756 aaKnown RBP25.76■■□□□ 1.71
SPCS3-203ENST00000507678 CYB5R4Q7L1T6 521 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms