RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 TRIM35Q9UPQ4 493 aa11.63□□□□□ -0.55
COPS4-205ENST00000507376 JAG2Q9Y219 1238 aa11.63□□□□□ -0.55
COPS4-205ENST00000507376 CHL1O00533 1208 aa11.62□□□□□ -0.55
COPS4-205ENST00000507376 ZBTB38Q8NAP3 1195 aaPredicted RBP11.62□□□□□ -0.55
COPS4-205ENST00000507376 OTUD5Q96G74 571 aa11.62□□□□□ -0.55
COPS4-205ENST00000507376 ZNF333Q96JL9 665 aa11.62□□□□□ -0.55
COPS4-205ENST00000507376 GREM2Q9H772 168 aa11.62□□□□□ -0.55
COPS4-205ENST00000507376 CUL9Q8IWT3 2517 aa11.62□□□□□ -0.55
COPS4-205ENST00000507376 ARAP2Q8WZ64 1704 aa11.61□□□□□ -0.55
COPS4-205ENST00000507376 DUSP27Q5VZP5 1158 aa11.61□□□□□ -0.55
COPS4-205ENST00000507376 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
COPS4-205ENST00000507376 SH3TC2Q8TF17 1288 aa11.61□□□□□ -0.55
COPS4-205ENST00000507376 SHISA4Q96DD7 197 aa11.61□□□□□ -0.55
COPS4-205ENST00000507376 COL6A3P12111 3177 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
COPS4-205ENST00000507376 ELL2O00472 640 aaPredicted RBP11.6□□□□□ -0.55
COPS4-205ENST00000507376 ATP2B4P23634 1241 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 NF2P35240 595 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 CCDC152Q4G0S7 254 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 NBPF12Q5TAG4 269 aaPredicted RBP11.6□□□□□ -0.55
COPS4-205ENST00000507376 PODNQ7Z5L7 613 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 ANKRD18AQ8IVF6 992 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 HS6ST3Q8IZP7 471 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 EFCC1Q9HA90 598 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
COPS4-205ENST00000507376 MINPP1Q9UNW1 487 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 LAMA3Q16787 3333 aa11.6□□□□□ -0.55
COPS4-205ENST00000507376 ALPK3Q96L96 1907 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
COPS4-205ENST00000507376 PDE8AO60658 829 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 PCCAP05165 728 aaPredicted RBP11.59□□□□□ -0.55
COPS4-205ENST00000507376 CCT4P50991 539 aaKnown RBP11.59□□□□□ -0.55
COPS4-205ENST00000507376 CTSWP56202 376 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 GTF2IP78347 998 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
COPS4-205ENST00000507376 RIC3Q7Z5B4 369 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
COPS4-205ENST00000507376 DEFB129Q9H1M3 183 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
COPS4-205ENST00000507376 DBF4Q9UBU7 674 aaPredicted RBP11.59□□□□□ -0.55
COPS4-205ENST00000507376 COL1A1P02452 1464 aaPredicted RBP11.58□□□□□ -0.56
COPS4-205ENST00000507376 SOX1O00570 391 aaPredicted RBP11.58□□□□□ -0.56
COPS4-205ENST00000507376 IGKV5-2P06315 115 aa11.58□□□□□ -0.56
COPS4-205ENST00000507376 BRI3BPQ8WY22 251 aa11.58□□□□□ -0.56
COPS4-205ENST00000507376 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
COPS4-205ENST00000507376 ERO1AQ96HE7 468 aa11.58□□□□□ -0.56
COPS4-205ENST00000507376 IRS2Q9Y4H2 1338 aa11.58□□□□□ -0.56
COPS4-205ENST00000507376 CTGFP29279 349 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 MTFR1Q15390 333 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 MAP3K11Q16584 847 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 CWF19L2Q2TBE0 894 aaKnown RBP11.57□□□□□ -0.56
COPS4-205ENST00000507376 STRIP1Q5VSL9 837 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 INTS3Q68E01 1043 aaKnown RBP11.57□□□□□ -0.56
COPS4-205ENST00000507376 FAM43AQ8N2R8 423 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 ZNF579Q8NAF0 562 aaKnown RBP11.57□□□□□ -0.56
COPS4-205ENST00000507376 TTLL11Q8NHH1 800 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 VEZTQ9HBM0 779 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 BABAM1Q9NWV8 329 aa11.57□□□□□ -0.56
COPS4-205ENST00000507376 DLL1O00548 723 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 ALDH1A1P00352 501 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 ZBTB48P10074 688 aaPredicted RBP11.56□□□□□ -0.56
COPS4-205ENST00000507376 SP3Q02447 781 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 GOLGA2Q08379 1002 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 SLC9C1Q4G0N8 1177 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 TTLL5Q6EMB2 1281 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 OGFOD1Q8N543 542 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 MS4A4AQ96JQ5 239 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 HYPKQ9NX55 129 aa11.56□□□□□ -0.56
COPS4-205ENST00000507376 CWC25Q9NXE8 425 aaPredicted RBP11.56□□□□□ -0.56
COPS4-205ENST00000507376 USP2O75604 605 aaPredicted RBP11.55□□□□□ -0.56
COPS4-205ENST00000507376 CLCN6P51797 869 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 SLC4A8Q2Y0W8 1093 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 CFAP100Q494V2 611 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 LHX8Q68G74 356 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 HELBQ8NG08 1087 aaPredicted RBP11.55□□□□□ -0.56
COPS4-205ENST00000507376 OPTNQ96CV9 577 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 PRMT6Q96LA8 375 aaPredicted RBP11.55□□□□□ -0.56
COPS4-205ENST00000507376 COA1Q9GZY4 146 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 MAP3K2Q9Y2U5 619 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 ZNF804BA4D1E1 1349 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 MYO3BQ8WXR4 1341 aa11.55□□□□□ -0.56
COPS4-205ENST00000507376 TAF5LO75529 589 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 HOXB7P09629 217 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 DLGAP5Q15398 846 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.54□□□□□ -0.56
COPS4-205ENST00000507376 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 C8orf58Q8NAV2 365 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 LRCH3Q96II8 777 aa11.54□□□□□ -0.56
COPS4-205ENST00000507376 METTL22Q9BUU2 404 aaPredicted RBP11.54□□□□□ -0.56
COPS4-205ENST00000507376 BSDC1Q9NW68 430 aaPredicted RBP11.54□□□□□ -0.56
COPS4-205ENST00000507376 TESPA1A2RU30 521 aaPredicted RBP11.53□□□□□ -0.56
COPS4-205ENST00000507376 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
COPS4-205ENST00000507376 RASA3Q14644 834 aa11.53□□□□□ -0.56
COPS4-205ENST00000507376 TAF1CQ15572 869 aaPredicted RBP11.53□□□□□ -0.56
COPS4-205ENST00000507376 GRIK5Q16478 980 aa11.53□□□□□ -0.56
COPS4-205ENST00000507376 UBE3BQ7Z3V4 1068 aa11.53□□□□□ -0.56
COPS4-205ENST00000507376 TSPYL6Q8N831 410 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms