RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	TGFB1	P01137	390 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	TNNT3	P45378	269 aa	Predicted RBP	6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	IREB2	P48200	963 aa	Known RBP	6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	RBM25	P49756	843 aa	Known RBP	6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	RIPK4	P57078	832 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	RAC1	P63000	192 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	BTLA	Q7Z6A9	289 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	STAG2	Q8N3U4	1231 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	FAM200A	Q8TCP9	573 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	PBXIP1	Q96AQ6	731 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	SLC26A8	Q96RN1	970 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	NCAN	O14594	1321 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	KIF16B	Q96L93	1317 aa		6.24	□□□□□ -1.41
TUSC3-205	ENST00000507316	HMGB1P1	B2RPK0	211 aa	Predicted RBP	6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	ZNF853	P0CG23	659 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	XRCC6	P12956	609 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	IGFBP4	P22692	258 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	ADH7	P40394	386 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	RTN1	Q16799	776 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	AEBP1	Q8IUX7	1158 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	ITFG2	Q969R8	447 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	UBE2O	Q9C0C9	1292 aa	Known RBP	6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	MED4	Q9NPJ6	270 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	DONSON	Q9NYP3	566 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	CGN	Q9P2M7	1197 aa	Known RBP	6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	NUB1	Q9Y5A7	615 aa		6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	SMG6	Q86US8	1419 aa	Known RBP	6.23	□□□□□ -1.41
TUSC3-205	ENST00000507316	DBX1	A6NMT0	343 aa		6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	HSPA5	P11021	654 aa	Known RBP	6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	GTF2F1	P35269	517 aa	Known RBP eCLIP	6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	B4GALNT3	Q6L9W6	998 aa		6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	POTEA	Q6S8J7	498 aa		6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	EXOC8	Q8IYI6	725 aa		6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	MEGF10	Q96KG7	1140 aa		6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	UST	Q9Y2C2	406 aa		6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	PRDM2	Q13029	1718 aa		6.22	□□□□□ -1.41
TUSC3-205	ENST00000507316	ADARB2-AS1	A8MUL3	147 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	PPP1R12A	O14974	1030 aa	Predicted RBP	6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	EPB42	P16452	691 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	ARID4A	P29374	1257 aa	Predicted RBP	6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	NOS3	P29474	1203 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	KCNJ4	P48050	445 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	SRPK2	P78362	688 aa	Known RBP	6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	MTA1	Q13330	715 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	CCDC27	Q2M243	656 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	CFAP70	Q5T0N1	1121 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	ZNF771	Q7L3S4	317 aa	Predicted RBP	6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	TNFRSF25	Q93038	417 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	PPP1R9B	Q96SB3	815 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	UPF2	Q9HAU5	1272 aa	Known RBP	6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	KLK14	Q9P0G3	267 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	CUX2	O14529	1486 aa		6.21	□□□□□ -1.42
TUSC3-205	ENST00000507316	UQCRHL	A0A096LP55	91 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	CCDC196	A0A1B0GTZ2	297 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	TGFBR3L	H3BV60	316 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	CTAGE5	O15320	804 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	FRAT2	O75474	233 aa	Predicted RBP	6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	WNT11	O96014	354 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	UQCRH	P07919	91 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	SPINK2	P20155	84 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	GTF2A1	P52655	376 aa	Predicted RBP	6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	KCNQ4	P56696	695 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	HNRNPU	Q00839	825 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	DGKZ	Q13574	1117 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	ZNF124	Q15973	351 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	CCDC91	Q7Z6B0	441 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	ASIC4	Q96FT7	647 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	GRPEL1	Q9HAV7	217 aa		6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	CWC22	Q9HCG8	908 aa	Known RBP	6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	NOVA2	Q9UNW9	492 aa	Known RBP	6.2	□□□□□ -1.42
TUSC3-205	ENST00000507316	FOXO3	O43524	673 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	EIF3J	O75822	258 aa	Known RBP	6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	IDH3A	P50213	366 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	SYCP1	Q15431	976 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	RINL	Q6ZS11	566 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	KRT25	Q7Z3Z0	450 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	ANKRD23	Q86SG2	305 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	MSL3	Q8N5Y2	521 aa	Known RBP	6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	ZNF526	Q8TF50	670 aa	Predicted RBP	6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	SNRNP27	Q8WVK2	155 aa	Known RBP	6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	TSPAN18	Q96SJ8	248 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	OGFR	Q9NZT2	677 aa		6.19	□□□□□ -1.42
TUSC3-205	ENST00000507316	DHX57	Q6P158	1386 aa	Known RBP	6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	VIRMA	Q69YN4	1812 aa	Known RBP	6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316		B8ZZF3	427 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	BRD1	O95696	1058 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	SETSIP	P0DME0	302 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	NFKB1	P19838	968 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	BUD31	P41223	144 aa	Predicted RBP	6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	TDO2	P48775	406 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	SARNP	P82979	210 aa	Known RBP	6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	CCIN	Q13939	588 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	IER5	Q5VY09	327 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	ICE2	Q659A1	982 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	C20orf204	Q6ZNR8	217 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	TMTC2	Q8N394	836 aa		6.18	□□□□□ -1.42
TUSC3-205	ENST00000507316	MYRIP	Q8NFW9	859 aa		6.18	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms