RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 RAB11FIP4Q86YS3 637 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 CPDO75976 1380 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 SUPT20HL1Q3ZLR7 823 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 PPP4R3AQ6IN85 833 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 GADL1Q6ZQY3 521 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 GPR101Q96P66 508 aaPredicted RBP11.04□□□□□ -0.64
NEK1-203ENST00000507142 IQCA1LA6NCM1 817 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 MICU3Q86XE3 530 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
NEK1-203ENST00000507142 MKRN3Q13064 507 aaKnown RBP11.04□□□□□ -0.64
NEK1-203ENST00000507142 CCDC12Q8WUD4 166 aaPredicted RBP11.04□□□□□ -0.64
NEK1-203ENST00000507142 USP17L3A6NCW0 530 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 USP17L4A6NCW7 530 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 AOC3Q16853 763 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 BEND3Q5T5X7 828 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 USP17L1Q7RTZ2 530 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 C2orf69Q8N8R5 385 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 ZNF396Q96N95 335 aaPredicted RBP11.03□□□□□ -0.64
NEK1-203ENST00000507142 AS3MTQ9HBK9 375 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 SSRP1Q08945 709 aaKnown RBP11.03□□□□□ -0.64
NEK1-203ENST00000507142 UBE4AQ14139 1066 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 DNTTIP2Q5QJE6 756 aaKnown RBP11.03□□□□□ -0.64
NEK1-203ENST00000507142 TBC1D9Q6ZT07 1266 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 SPDYE4A6NLX3 237 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 DPEP1P16444 411 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 PDE1AP54750 535 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 ARHGEF6Q15052 776 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 LRRC24Q50LG9 513 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 SAMM50Q9Y512 469 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 GRIPAP1Q4V328 841 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 ANKRD20A12PQ8NF67 263 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 ZSCAN31Q96LW9 406 aaPredicted RBP11.03□□□□□ -0.64
NEK1-203ENST00000507142 CCDC194A0A1B0GVG4 234 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 TBC1D10BQ4KMP7 808 aaPredicted RBP11.03□□□□□ -0.64
NEK1-203ENST00000507142 TTC41PQ6P2S7 1318 aa11.03□□□□□ -0.64
NEK1-203ENST00000507142 ITPK1Q13572 414 aa11.02□□□□□ -0.64
NEK1-203ENST00000507142 COL23A1Q86Y22 540 aaPredicted RBP11.02□□□□□ -0.64
NEK1-203ENST00000507142 RLBP1P12271 317 aa11.02□□□□□ -0.65
NEK1-203ENST00000507142 UPF3BQ9BZI7 483 aaKnown RBP11.02□□□□□ -0.65
NEK1-203ENST00000507142 BECN2A8MW95 431 aa11.02□□□□□ -0.65
NEK1-203ENST00000507142 ZAP70P43403 619 aa11.02□□□□□ -0.65
NEK1-203ENST00000507142 NMIQ13287 307 aaPredicted RBP11.02□□□□□ -0.65
NEK1-203ENST00000507142 CCT2P78371 535 aaKnown RBP11.01□□□□□ -0.65
NEK1-203ENST00000507142 LARP1BQ659C4 914 aaKnown RBP11.01□□□□□ -0.65
NEK1-203ENST00000507142 SMARCC2Q8TAQ2 1214 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 PAGR1Q9BTK6 254 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 MCM5P33992 734 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 EPS15P42566 896 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
NEK1-203ENST00000507142 BMP2KQ9NSY1 1161 aaPredicted RBP11.01□□□□□ -0.65
NEK1-203ENST00000507142 TTC22Q5TAA0 569 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 JMYQ8N9B5 988 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 PUS3Q9BZE2 481 aaKnown RBP11.01□□□□□ -0.65
NEK1-203ENST00000507142 BTDP43251 543 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
NEK1-203ENST00000507142 PABPC4Q13310 644 aaKnown RBP eCLIP11.01□□□□□ -0.65
NEK1-203ENST00000507142 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
NEK1-203ENST00000507142 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
NEK1-203ENST00000507142 USP17L8P0C7I0 530 aa11□□□□□ -0.65
NEK1-203ENST00000507142 PNMA6EA0A0J9YXQ4 647 aa11□□□□□ -0.65
NEK1-203ENST00000507142 METAP2P50579 478 aaKnown RBP eCLIP11□□□□□ -0.65
NEK1-203ENST00000507142 NUCB2P80303 420 aa11□□□□□ -0.65
NEK1-203ENST00000507142 CCDC102BQ68D86 513 aa11□□□□□ -0.65
NEK1-203ENST00000507142 PDE8BO95263 885 aa11□□□□□ -0.65
NEK1-203ENST00000507142 BAG4O95429 457 aaKnown RBP11□□□□□ -0.65
NEK1-203ENST00000507142 CKAP2LQ8IYA6 745 aa11□□□□□ -0.65
NEK1-203ENST00000507142 SLC10A4Q96EP9 437 aa11□□□□□ -0.65
NEK1-203ENST00000507142 SDF4Q9BRK5 362 aa11□□□□□ -0.65
NEK1-203ENST00000507142 PRM3Q9NNZ6 103 aa11□□□□□ -0.65
NEK1-203ENST00000507142 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
NEK1-203ENST00000507142 ECE2O60344 883 aa11□□□□□ -0.65
NEK1-203ENST00000507142 GNAQP50148 359 aa11□□□□□ -0.65
NEK1-203ENST00000507142 COA1Q9GZY4 146 aa11□□□□□ -0.65
NEK1-203ENST00000507142 USP44Q9H0E7 712 aa11□□□□□ -0.65
NEK1-203ENST00000507142 PCDHB15Q9Y5E8 787 aa11□□□□□ -0.65
NEK1-203ENST00000507142 NDUFB9Q9Y6M9 179 aa11□□□□□ -0.65
NEK1-203ENST00000507142 GOLGA6L19H0YKK7 550 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 IREB2P48200 963 aaKnown RBP10.99□□□□□ -0.65
NEK1-203ENST00000507142 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
NEK1-203ENST00000507142 TMTC2Q8N394 836 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 HEATR3Q7Z4Q2 680 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 DCTPP1Q9H773 170 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 GPCPD1Q9NPB8 672 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 ZBED4O75132 1171 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 PRR5LQ6MZQ0 368 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 BSDC1Q9NW68 430 aaPredicted RBP10.99□□□□□ -0.65
NEK1-203ENST00000507142 IARSP41252 1262 aaKnown RBP10.99□□□□□ -0.65
NEK1-203ENST00000507142 CPXCR1Q8N123 301 aa10.99□□□□□ -0.65
NEK1-203ENST00000507142 DDX49Q9Y6V7 483 aaKnown RBP10.99□□□□□ -0.65
NEK1-203ENST00000507142 LIG1P18858 919 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 HMG20BQ9P0W2 317 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 NUCB1Q02818 461 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 SLC26A6Q9BXS9 759 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 GOPCQ9HD26 462 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 ZBTB40Q9NUA8 1239 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 IGHDP01880 384 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 CCDC83Q8IWF9 413 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 PRDM1O75626 825 aa10.98□□□□□ -0.65
NEK1-203ENST00000507142 NOD1Q9Y239 953 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms