RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
CLCN3-205ENST00000506924 COL15A1P39059 1388 aa12.3□□□□□ -0.44
CLCN3-205ENST00000506924 GYS1P13807 737 aa12.3□□□□□ -0.44
CLCN3-205ENST00000506924 MYL6BP14649 208 aa12.3□□□□□ -0.44
CLCN3-205ENST00000506924 EIF5P55010 431 aaKnown RBP12.3□□□□□ -0.44
CLCN3-205ENST00000506924 HDGFL1Q5TGJ6 251 aa12.3□□□□□ -0.44
CLCN3-205ENST00000506924 RNF20Q5VTR2 975 aa12.3□□□□□ -0.44
CLCN3-205ENST00000506924 NBPF10Q6P3W6 841 aaKnown RBP12.3□□□□□ -0.44
CLCN3-205ENST00000506924 NBPF15Q8N660 670 aa12.3□□□□□ -0.44
CLCN3-205ENST00000506924 SNIP1Q8TAD8 396 aaKnown RBP12.3□□□□□ -0.44
CLCN3-205ENST00000506924 TSR2Q969E8 191 aaKnown RBP12.3□□□□□ -0.44
CLCN3-205ENST00000506924 CALR3Q96L12 384 aaKnown RBP12.3□□□□□ -0.44
CLCN3-205ENST00000506924 CEP126Q9P2H0 1117 aa12.3□□□□□ -0.44
CLCN3-205ENST00000506924 USP42Q9H9J4 1324 aaKnown RBP12.3□□□□□ -0.44
CLCN3-205ENST00000506924 ESPNB1AK53 854 aa12.29□□□□□ -0.44
CLCN3-205ENST00000506924 ELL2O00472 640 aaPredicted RBP12.29□□□□□ -0.44
CLCN3-205ENST00000506924 MMP10P09238 476 aa12.29□□□□□ -0.44
CLCN3-205ENST00000506924 ZNF853P0CG23 659 aa12.29□□□□□ -0.44
CLCN3-205ENST00000506924 ADAMTS19Q8TE59 1207 aa12.29□□□□□ -0.44
CLCN3-205ENST00000506924 FHDC1Q9C0D6 1143 aaPredicted RBP12.29□□□□□ -0.44
CLCN3-205ENST00000506924 IFT57Q9NWB7 429 aa12.29□□□□□ -0.44
CLCN3-205ENST00000506924 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
CLCN3-205ENST00000506924 LAMB4A4D0S4 1761 aa12.28□□□□□ -0.44
CLCN3-205ENST00000506924 ANXA1P04083 346 aa12.28□□□□□ -0.44
CLCN3-205ENST00000506924 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-205ENST00000506924 GNAI1P63096 354 aa12.28□□□□□ -0.44
CLCN3-205ENST00000506924 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
CLCN3-205ENST00000506924 CCDC27Q2M243 656 aa12.28□□□□□ -0.44
CLCN3-205ENST00000506924 VASH1Q7L8A9 365 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-205ENST00000506924 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
CLCN3-205ENST00000506924 NARFQ9UHQ1 456 aa12.28□□□□□ -0.44
CLCN3-205ENST00000506924 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
CLCN3-205ENST00000506924 ADH1CP00326 375 aa12.27□□□□□ -0.45
CLCN3-205ENST00000506924 FOXC1Q12948 553 aa12.27□□□□□ -0.45
CLCN3-205ENST00000506924 NR5A1Q13285 461 aa12.27□□□□□ -0.45
CLCN3-205ENST00000506924 BICDL1Q6ZP65 573 aa12.27□□□□□ -0.45
CLCN3-205ENST00000506924 TRIM67Q6ZTA4 783 aa12.27□□□□□ -0.45
CLCN3-205ENST00000506924 NLGN1Q8N2Q7 840 aa12.27□□□□□ -0.45
CLCN3-205ENST00000506924 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-205ENST00000506924 TOR4AQ9NXH8 423 aa12.27□□□□□ -0.45
CLCN3-205ENST00000506924 A0A087WZG4 1122 aa12.26□□□□□ -0.45
CLCN3-205ENST00000506924 PROSER3Q2NL68 480 aa12.26□□□□□ -0.45
CLCN3-205ENST00000506924 DUSP27Q5VZP5 1158 aa12.26□□□□□ -0.45
CLCN3-205ENST00000506924 CYP4X1Q8N118 509 aa12.26□□□□□ -0.45
CLCN3-205ENST00000506924 C8orf58Q8NAV2 365 aa12.26□□□□□ -0.45
CLCN3-205ENST00000506924 CAMTA2O94983 1202 aa12.25□□□□□ -0.45
CLCN3-205ENST00000506924 DDR1Q08345 913 aa12.25□□□□□ -0.45
CLCN3-205ENST00000506924 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
CLCN3-205ENST00000506924 NLGN2Q8NFZ4 835 aa12.25□□□□□ -0.45
CLCN3-205ENST00000506924 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
CLCN3-205ENST00000506924 SERPINA10Q9UK55 444 aa12.25□□□□□ -0.45
CLCN3-205ENST00000506924 TLL2Q9Y6L7 1015 aa12.25□□□□□ -0.45
CLCN3-205ENST00000506924 TCERG1O14776 1098 aaKnown RBP12.24□□□□□ -0.45
CLCN3-205ENST00000506924 GRM5P41594 1212 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 DHX9Q08211 1270 aaKnown RBP12.24□□□□□ -0.45
CLCN3-205ENST00000506924 AIMP1Q12904 312 aaKnown RBP12.24□□□□□ -0.45
CLCN3-205ENST00000506924 NFIXQ14938 502 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 SLFNL1Q499Z3 407 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 TBC1D9BQ66K14 1250 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 TTLL7Q6ZT98 887 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 PHTF2Q8N3S3 785 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 CHPF2Q9P2E5 772 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 WWC3Q9ULE0 1092 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 PARP3Q9Y6F1 533 aa12.24□□□□□ -0.45
CLCN3-205ENST00000506924 TM4SF1P30408 202 aa12.23□□□□□ -0.45
CLCN3-205ENST00000506924 HLFQ16534 295 aa12.23□□□□□ -0.45
CLCN3-205ENST00000506924 WDR63Q8IWG1 891 aa12.23□□□□□ -0.45
CLCN3-205ENST00000506924 IL16Q14005 1332 aa12.22□□□□□ -0.45
CLCN3-205ENST00000506924 FANCIQ9NVI1 1328 aa12.22□□□□□ -0.45
CLCN3-205ENST00000506924 TTC24A2A3L6 582 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-205ENST00000506924 POLRMTO00411 1230 aaKnown RBP12.22□□□□□ -0.45
CLCN3-205ENST00000506924 LZTS3O60299 673 aaPredicted RBP12.22□□□□□ -0.45
CLCN3-205ENST00000506924 ARID5BQ14865 1188 aa12.22□□□□□ -0.45
CLCN3-205ENST00000506924 MAP7D1Q3KQU3 841 aa12.22□□□□□ -0.45
CLCN3-205ENST00000506924 SCN7AQ01118 1682 aa12.22□□□□□ -0.45
CLCN3-205ENST00000506924 FAM177BA6PVY3 158 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 ALDH1A1P00352 501 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 KIF6Q6ZMV9 814 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 COPS6Q7L5N1 327 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 LRP10Q7Z4F1 713 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 CCDC97Q96F63 343 aaPredicted RBP12.21□□□□□ -0.45
CLCN3-205ENST00000506924 C1orf115Q9H7X2 142 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 PDZRN3Q9UPQ7 1066 aa12.21□□□□□ -0.45
CLCN3-205ENST00000506924 BCORQ6W2J9 1755 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 ERBB4Q15303 1308 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 TNFRSF10AO00220 468 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 SERPINB2P05120 415 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 HOXB7P09629 217 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 FSHRP23945 695 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 EXOSC9Q06265 439 aaKnown RBP12.2□□□□□ -0.46
CLCN3-205ENST00000506924 LAPTM4AQ15012 233 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 INTS6LQ5JSJ4 861 aaKnown RBP12.2□□□□□ -0.46
CLCN3-205ENST00000506924 RNF135Q8IUD6 432 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 ZNF428Q96B54 188 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 UCN2Q96RP3 112 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
CLCN3-205ENST00000506924 WASF2Q9Y6W5 498 aa12.2□□□□□ -0.46
CLCN3-205ENST00000506924 MAP3K15Q6ZN16 1313 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms