RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 HIBADHP31937 336 aaKnown RBP10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 SCARF1Q14162 830 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 DCAF8Q5TAQ9 597 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 PI16Q6UXB8 463 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 FBXO33Q7Z6M2 555 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 SUPT20HQ8NEM7 779 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 EYA3Q99504 573 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 CD209Q9NNX6 404 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 SNRKQ9NRH2 765 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 PPP4R2Q9NY27 417 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 A0A1B0GUL6 1792 aa10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 CHAF1AQ13111 956 aaPredicted RBP10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 GORABQ5T7V8 394 aa10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 CCDC102BQ68D86 513 aa10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 CLASRPQ8N2M8 674 aaKnown RBP10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 GCC1Q96CN9 775 aa10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 AKAP2Q9Y2D5 859 aa10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 KDM2BQ8NHM5 1336 aa10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 LTBP3Q9NS15 1303 aa10.86□□□□□ -0.67
SCAMP1-202ENST00000506858 ZNF609O15014 1411 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 CCDC88AQ3V6T2 1871 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 IFIT2P09913 472 aaKnown RBP10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 PDE4AP27815 886 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 VPS37DQ86XT2 251 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 NIM1KQ8IY84 436 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 GPR108Q9NPR9 543 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 ZNF541Q9H0D2 1346 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
SCAMP1-202ENST00000506858 GTF2IP78347 998 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 NUCB1Q02818 461 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 CXCL9Q07325 125 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 GRIK5Q16478 980 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 GRIPAP1Q4V328 841 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 CAVIN4Q5BKX8 364 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 CHD1LQ86WJ1 897 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 JDP2Q8WYK2 163 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 ZNRF3Q9ULT6 936 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 GJA3Q9Y6H8 435 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 CHD4Q14839 1912 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 SBF1O95248 1867 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 SHTN1A0MZ66 631 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 FRAT2O75474 233 aaPredicted RBP10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 MAP4K4O95819 1239 aaPredicted RBP10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 TBC1D9Q6ZT07 1266 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 C15orf52Q6ZUT6 534 aaKnown RBP10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 ZNF804AQ7Z570 1209 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 TDRD7Q8NHU6 1098 aaKnown RBP10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 ZNF526Q8TF50 670 aaPredicted RBP10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 EDC3Q96F86 508 aaKnown RBP10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 PHF12Q96QT6 1004 aa10.84□□□□□ -0.67
SCAMP1-202ENST00000506858 PSMD14O00487 310 aa10.83□□□□□ -0.68
SCAMP1-202ENST00000506858 DDNO94850 711 aaPredicted RBP10.83□□□□□ -0.68
SCAMP1-202ENST00000506858 RASGRF1Q13972 1273 aa10.83□□□□□ -0.68
SCAMP1-202ENST00000506858 TTC39AQ5SRH9 613 aa10.83□□□□□ -0.68
SCAMP1-202ENST00000506858 COA1Q9GZY4 146 aa10.83□□□□□ -0.68
SCAMP1-202ENST00000506858 BOLA2Q9H3K6 86 aa10.83□□□□□ -0.68
SCAMP1-202ENST00000506858 F8W031 263 aaPredicted RBP10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 FZD9O00144 591 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 IL1R1P14778 569 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 MCAMP43121 646 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 ERICH6BQ5W0A0 696 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 TTLL5Q6EMB2 1281 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 CENPQQ7L2Z9 268 aaPredicted RBP10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 CERS5Q8N5B7 392 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 HMG20BQ9P0W2 317 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 SCN9AQ15858 1988 aa10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 COL1A1P02452 1464 aaPredicted RBP10.82□□□□□ -0.68
SCAMP1-202ENST00000506858 ZAP70P43403 619 aa10.81□□□□□ -0.68
SCAMP1-202ENST00000506858 EIF6P56537 245 aaKnown RBP10.81□□□□□ -0.68
SCAMP1-202ENST00000506858 CCDC158Q5M9N0 1113 aa10.81□□□□□ -0.68
SCAMP1-202ENST00000506858 PODNQ7Z5L7 613 aa10.81□□□□□ -0.68
SCAMP1-202ENST00000506858 DNAJC2Q99543 621 aaKnown RBP10.81□□□□□ -0.68
SCAMP1-202ENST00000506858 ANTXR1Q9H6X2 564 aa10.81□□□□□ -0.68
SCAMP1-202ENST00000506858 USP17L3A6NCW0 530 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 USP17L4A6NCW7 530 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 CHGBP05060 677 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 RGS3P49796 1198 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 SLFNL1Q499Z3 407 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 DACT2Q5SW24 774 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 CIAPIN1Q6FI81 312 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 USP17L1Q7RTZ2 530 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 SALL3Q9BXA9 1300 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 VPS33BQ9H267 617 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 MX1P20591 662 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 GMPSP49915 693 aaPredicted RBP10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 PDE1AP54750 535 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 KIAA0825Q8IV33 1275 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 RASEFQ8IZ41 740 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 SPATA5Q8NB90 893 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 PIH1D3Q9NQM4 214 aaKnown RBP10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 ECHDC1Q9NTX5 307 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 GNL3LQ9NVN8 582 aaKnown RBP10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 ABCF2Q9UG63 623 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 PCDHAC2Q9Y5I4 1007 aa10.8□□□□□ -0.68
SCAMP1-202ENST00000506858 CYP2E1P05181 493 aaPredicted RBP10.79□□□□□ -0.68
SCAMP1-202ENST00000506858 VIL1P09327 827 aaKnown RBP10.79□□□□□ -0.68
SCAMP1-202ENST00000506858 UQCRFS1P1P0C7P4 283 aa10.79□□□□□ -0.68
SCAMP1-202ENST00000506858 ARID4AP29374 1257 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms