RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 DKK1O94907 266 aa5.71□□□□□ -1.5
TOPBP1-205ENST00000506779 EGFRP00533 1210 aa5.71□□□□□ -1.5
TOPBP1-205ENST00000506779 ADAMTSL4Q6UY14 1074 aa5.71□□□□□ -1.5
TOPBP1-205ENST00000506779 ZSWIM9Q86XI8 627 aa5.71□□□□□ -1.5
TOPBP1-205ENST00000506779 PI4K2BQ8TCG2 481 aa5.71□□□□□ -1.5
TOPBP1-205ENST00000506779 FBLIM1Q8WUP2 373 aa5.71□□□□□ -1.5
TOPBP1-205ENST00000506779 LGR5O75473 907 aa5.7□□□□□ -1.5
TOPBP1-205ENST00000506779 CD8BP10966 210 aa5.7□□□□□ -1.5
TOPBP1-205ENST00000506779 CEP135Q66GS9 1140 aa5.7□□□□□ -1.5
TOPBP1-205ENST00000506779 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-205ENST00000506779 CALR3Q96L12 384 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L15C9J2P7 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L10C9JJH3 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L13C9JLJ4 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L12C9JPN9 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L11C9JVI0 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L21D6R901 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L18D6R9N7 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L22D6RA61 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L17D6RBQ6 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L19D6RCP7 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L20D6RJB6 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 NPIPB6E9PJ23 425 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 NFIBO00712 420 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 XYLBO75191 536 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 EPHA1P21709 976 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 NLRP12P59046 1061 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 USP17L24Q0WX57 530 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 DPYDQ12882 1025 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 CDPF1Q6NVV7 123 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 ZNF765Q7L2R6 523 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 VTI1AQ96AJ9 217 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 MISP3Q96FF7 219 aa5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 LIN37Q96GY3 246 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-205ENST00000506779 IGFBP4P22692 258 aa5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 USP11P51784 963 aa5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 ATP11AP98196 1134 aa5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 CYP27A1Q02318 531 aa5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 KCNMB1Q16558 191 aa5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 PPP1R12CQ9BZL4 782 aa5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 SH2B1Q9NRF2 756 aaPredicted RBP5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 KLK14Q9P0G3 267 aa5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 RTCBQ9Y3I0 505 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-205ENST00000506779 FAM196BA6NMK8 535 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 SMNDC1O75940 238 aaKnown RBP eCLIP5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 TIAF1O95411 115 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 PTK7Q13308 1070 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 NUTM2GQ5VZR2 741 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 ANKMY2Q8IV38 441 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 FNBP4Q8N3X1 1017 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 FLAD1Q8NFF5 587 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 VRTNQ9H8Y1 702 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 USP20Q9Y2K6 914 aa5.67□□□□□ -1.5
TOPBP1-205ENST00000506779 OPLAHO14841 1288 aa5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 MICAL2O94851 1124 aa5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 IGHA2P01877 340 aa5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 SYN1P17600 705 aa5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 LMOD1P29536 600 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 DGKZQ13574 1117 aa5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 SMG8Q8ND04 991 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 CRIM1Q9NZV1 1036 aa5.66□□□□□ -1.5
TOPBP1-205ENST00000506779 SUV39H1O43463 412 aa5.65□□□□□ -1.5
TOPBP1-205ENST00000506779 PIP4K2BP78356 416 aa5.65□□□□□ -1.5
TOPBP1-205ENST00000506779 EZH1Q92800 747 aaPredicted RBP5.65□□□□□ -1.5
TOPBP1-205ENST00000506779 WNT8BQ93098 351 aa5.65□□□□□ -1.5
TOPBP1-205ENST00000506779 ZMYND15Q9H091 742 aa5.65□□□□□ -1.5
TOPBP1-205ENST00000506779 SUGCTQ9HAC7 445 aa5.65□□□□□ -1.5
TOPBP1-205ENST00000506779 PARD6AQ9NPB6 346 aa5.65□□□□□ -1.5
TOPBP1-205ENST00000506779 FOXO3O43524 673 aa5.64□□□□□ -1.51
TOPBP1-205ENST00000506779 NFKB2Q00653 900 aa5.64□□□□□ -1.51
TOPBP1-205ENST00000506779 KANK4Q5T7N3 995 aaPredicted RBP5.64□□□□□ -1.51
TOPBP1-205ENST00000506779 CIAPIN1Q6FI81 312 aa5.64□□□□□ -1.51
TOPBP1-205ENST00000506779 PRR23BQ6ZRT6 265 aa5.64□□□□□ -1.51
TOPBP1-205ENST00000506779 TMPRSS13Q9BYE2 586 aa5.64□□□□□ -1.51
TOPBP1-205ENST00000506779 OSGEPQ9NPF4 335 aa5.64□□□□□ -1.51
TOPBP1-205ENST00000506779 DRD2P14416 443 aa5.63□□□□□ -1.51
TOPBP1-205ENST00000506779 KCNA10Q16322 511 aa5.63□□□□□ -1.51
TOPBP1-205ENST00000506779 COL13A1Q5TAT6 717 aaPredicted RBP5.63□□□□□ -1.51
TOPBP1-205ENST00000506779 CYP4F12Q9HCS2 524 aa5.63□□□□□ -1.51
TOPBP1-205ENST00000506779 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.63□□□□□ -1.51
TOPBP1-205ENST00000506779 A0A0G2JLL6 359 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 A6NJR5 290 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 H3BRJ5 948 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 CD96P40200 585 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 PRRT2Q7Z6L0 340 aaPredicted RBP5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 CMTR1Q8N1G2 835 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 FAM200AQ8TCP9 573 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 BORCS6Q96GS4 357 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 SPACA7Q96KW9 195 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 YIPF2Q9BWQ6 316 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 RASSF4Q9H2L5 321 aa5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 QTRT2Q9H974 415 aaKnown RBP5.62□□□□□ -1.51
TOPBP1-205ENST00000506779 RFX1P22670 979 aa5.61□□□□□ -1.51
TOPBP1-205ENST00000506779 C11orf91Q3C1V1 193 aa5.61□□□□□ -1.51
TOPBP1-205ENST00000506779 C2CD4AQ8NCU7 369 aaPredicted RBP5.61□□□□□ -1.51
TOPBP1-205ENST00000506779 PITPNM2Q9BZ72 1349 aa5.61□□□□□ -1.51
TOPBP1-205ENST00000506779 CD320Q9NPF0 282 aa5.61□□□□□ -1.51
TOPBP1-205ENST00000506779 FAM177BA6PVY3 158 aa5.6□□□□□ -1.51
TOPBP1-205ENST00000506779 PTPRAP18433 802 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms