RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SDE2Q6IQ49 451 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 FAM200AQ8TCP9 573 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 GCC1Q96CN9 775 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 USP26Q9BXU7 913 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 ZDHHC9Q9Y397 364 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 TAF6LQ9Y6J9 622 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 SCAMP3O14828 347 aaKnown RBP7.34□□□□□ -1.23
SCLT1-207ENST00000506233 MAP4K4O95819 1239 aaPredicted RBP7.34□□□□□ -1.23
SCLT1-207ENST00000506233 NOP9Q86U38 636 aaKnown RBP7.34□□□□□ -1.23
SCLT1-207ENST00000506233 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 FOCADQ5VW36 1801 aa7.34□□□□□ -1.23
SCLT1-207ENST00000506233 IRX5P78411 483 aaPredicted RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 FANCCQ00597 558 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 SUCLG2Q96I99 432 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 PURBQ96QR8 312 aaKnown RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 CARD10Q9BWT7 1032 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 RWDD1Q9H446 243 aaPredicted RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 TLR7Q9NYK1 1049 aaKnown RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 PALD1Q9ULE6 856 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 ICMTO60725 284 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 TSGA10IPQ3SY00 556 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 KCNB2Q92953 911 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 TMA7Q9Y2S6 64 aaKnown RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 LRRFIP2Q9Y608 721 aaKnown RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 DNMT3AQ9Y6K1 912 aaPredicted RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 TIAM2Q8IVF5 1701 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 BTBD11A6QL63 1104 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 CALD1Q05682 793 aaKnown RBP7.33□□□□□ -1.24
SCLT1-207ENST00000506233 AMOTQ4VCS5 1084 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 TYW1BQ6NUM6 668 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 PI4KAP1Q8N8J0 262 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 CHD4Q14839 1912 aa7.33□□□□□ -1.24
SCLT1-207ENST00000506233 ZNF530Q6P9A1 599 aaPredicted RBP7.32□□□□□ -1.24
SCLT1-207ENST00000506233 SLC51AQ86UW1 340 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 TICAM2Q86XR7 235 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 API5Q9BZZ5 524 aaKnown RBP7.32□□□□□ -1.24
SCLT1-207ENST00000506233 COL11A2P13942 1736 aaPredicted RBP7.32□□□□□ -1.24
SCLT1-207ENST00000506233 PEX14O75381 377 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 PDE1AP54750 535 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 PRSS12P56730 875 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 MTMR2Q13614 643 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 TAF7LQ5H9L4 462 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 ANKMY2Q8IV38 441 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 ATG9AQ7Z3C6 839 aa7.32□□□□□ -1.24
SCLT1-207ENST00000506233 RPAP2Q8IXW5 612 aaPredicted RBP7.32□□□□□ -1.24
SCLT1-207ENST00000506233 NEURL1BA8MQ27 555 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 CD44P16070 742 aaKnown RBP7.31□□□□□ -1.24
SCLT1-207ENST00000506233 GLYCTKQ8IVS8 523 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 ATG3Q9NT62 314 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 TSKSQ9UJT2 592 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.31□□□□□ -1.24
SCLT1-207ENST00000506233 HELBQ8NG08 1087 aaPredicted RBP7.31□□□□□ -1.24
SCLT1-207ENST00000506233 PIGBQ92521 554 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 MKNK1Q9BUB5 465 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 CUEDC1Q9NWM3 386 aaPredicted RBP7.31□□□□□ -1.24
SCLT1-207ENST00000506233 RGPD3A6NKT7 1758 aaPredicted RBP7.31□□□□□ -1.24
SCLT1-207ENST00000506233 RGPD4Q7Z3J3 1758 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 CAPN10Q9HC96 672 aa7.31□□□□□ -1.24
SCLT1-207ENST00000506233 IRS2Q9Y4H2 1338 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 TIE1P35590 1138 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 EAPPQ56P03 285 aaPredicted RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 DDX21Q9NR30 783 aaKnown RBP eCLIP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 DCTN4Q9UJW0 460 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 EXOC6BQ9Y2D4 811 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 QSER1Q2KHR3 1735 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 IPO8O15397 1037 aaKnown RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 DNAJA1P31689 397 aaKnown RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 PKP1Q13835 747 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 FTSJ3Q8IY81 847 aaKnown RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 EXOC8Q8IYI6 725 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 SNX21Q969T3 373 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 ADAM33Q9BZ11 813 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 ZSWIM4Q9H7M6 989 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 COL1A1P02452 1464 aaPredicted RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 ADAMTSL1Q8N6G6 1762 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 PTPN12Q05209 780 aaKnown RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 CLEC17AQ6ZS10 378 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 TTLL7Q6ZT98 887 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 SLF2Q8IX21 1173 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 KLHDC4Q8TBB5 520 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 GTF3C2Q8WUA4 911 aaPredicted RBP7.3□□□□□ -1.24
SCLT1-207ENST00000506233 DCAF5Q96JK2 942 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 TMEM134Q9H6X4 195 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 MAP3K2Q9Y2U5 619 aa7.3□□□□□ -1.24
SCLT1-207ENST00000506233 SPATA31A1Q5TZJ5 1347 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 CENPFP49454 3210 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 MED23Q9ULK4 1368 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 TPD52L2O43399 206 aaKnown RBP7.29□□□□□ -1.24
SCLT1-207ENST00000506233 CCT4P50991 539 aaKnown RBP7.29□□□□□ -1.24
SCLT1-207ENST00000506233 FXR2P51116 673 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCLT1-207ENST00000506233 PTPROQ16827 1216 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 CCDC30Q5VVM6 783 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 PPP1R42Q7Z4L9 355 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 SULF1Q8IWU6 871 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 OGFOD1Q8N543 542 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
SCLT1-207ENST00000506233 RDH13Q8NBN7 331 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms