RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 C19orf57Q0VDD7 668 aa7.17□□□□□ -1.26
SMN2-205ENST00000505346 FKBP5Q13451 457 aaPredicted RBP7.17□□□□□ -1.26
SMN2-205ENST00000505346 SMG8Q8ND04 991 aaKnown RBP7.17□□□□□ -1.26
SMN2-205ENST00000505346 FARP2O94887 1054 aaPredicted RBP7.16□□□□□ -1.26
SMN2-205ENST00000505346 CDCA8Q53HL2 280 aa7.16□□□□□ -1.26
SMN2-205ENST00000505346 CFAP70Q5T0N1 1121 aa7.16□□□□□ -1.26
SMN2-205ENST00000505346 DUSP27Q5VZP5 1158 aa7.16□□□□□ -1.26
SMN2-205ENST00000505346 SHISA5Q8N114 240 aa7.16□□□□□ -1.26
SMN2-205ENST00000505346 FBLIM1Q8WUP2 373 aa7.16□□□□□ -1.26
SMN2-205ENST00000505346 YIPF2Q9BWQ6 316 aa7.16□□□□□ -1.26
SMN2-205ENST00000505346 SUGCTQ9HAC7 445 aa7.16□□□□□ -1.26
SMN2-205ENST00000505346 PAK6Q9NQU5 681 aaPredicted RBP7.16□□□□□ -1.26
SMN2-205ENST00000505346 PAPLNO95428 1278 aa7.15□□□□□ -1.26
SMN2-205ENST00000505346 ZAP70P43403 619 aa7.15□□□□□ -1.26
SMN2-205ENST00000505346 ZAR1Q86SH2 424 aa7.15□□□□□ -1.26
SMN2-205ENST00000505346 GPR152Q8TDT2 470 aa7.15□□□□□ -1.26
SMN2-205ENST00000505346 TMPRSS13Q9BYE2 586 aa7.15□□□□□ -1.26
SMN2-205ENST00000505346 KRTAP4-11Q9BYQ6 195 aa7.15□□□□□ -1.26
SMN2-205ENST00000505346 SAP130Q9H0E3 1048 aa7.15□□□□□ -1.26
SMN2-205ENST00000505346 TIAF1O95411 115 aa7.14□□□□□ -1.27
SMN2-205ENST00000505346 PRIMPOLQ96LW4 560 aa7.14□□□□□ -1.27
SMN2-205ENST00000505346 USP26Q9BXU7 913 aa7.14□□□□□ -1.27
SMN2-205ENST00000505346 NOVA2Q9UNW9 492 aaKnown RBP7.14□□□□□ -1.27
SMN2-205ENST00000505346 PDE2AO00408 941 aaPredicted RBP7.13□□□□□ -1.27
SMN2-205ENST00000505346 DRD2P14416 443 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 ADMP35318 185 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 CYP27A1Q02318 531 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 SWI5Q1ZZU3 235 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 EXOSC6Q5RKV6 272 aaKnown RBP7.13□□□□□ -1.27
SMN2-205ENST00000505346 PDE12Q6L8Q7 609 aaKnown RBP7.13□□□□□ -1.27
SMN2-205ENST00000505346 CDPF1Q6NVV7 123 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 SPOCD1Q6ZMY3 1216 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 KSR1Q8IVT5 923 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 LRRC4CQ9HCJ2 640 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 PRKAG2Q9UGJ0 569 aa7.13□□□□□ -1.27
SMN2-205ENST00000505346 FAM170BA6NMN3 283 aa7.12□□□□□ -1.27
SMN2-205ENST00000505346 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
SMN2-205ENST00000505346 PLCL1Q15111 1095 aa7.12□□□□□ -1.27
SMN2-205ENST00000505346 FAM26DQ5JW98 314 aa7.12□□□□□ -1.27
SMN2-205ENST00000505346 ELP3Q9H9T3 547 aa7.12□□□□□ -1.27
SMN2-205ENST00000505346 KANSL3Q9P2N6 904 aa7.12□□□□□ -1.27
SMN2-205ENST00000505346 ZC3H7BQ9UGR2 993 aaKnown RBP7.12□□□□□ -1.27
SMN2-205ENST00000505346 SLC5A6Q9Y289 635 aa7.12□□□□□ -1.27
SMN2-205ENST00000505346 ACIN1Q9UKV3 1341 aaKnown RBP7.11□□□□□ -1.27
SMN2-205ENST00000505346 IKBKEQ14164 716 aa7.11□□□□□ -1.27
SMN2-205ENST00000505346 SLC38A3Q99624 504 aa7.11□□□□□ -1.27
SMN2-205ENST00000505346 LOC100289279A0A1B0GTE1 492 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 NFKBIEO00221 500 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 SOX1O00570 391 aaPredicted RBP7.1□□□□□ -1.27
SMN2-205ENST00000505346 PRMT3O60678 531 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 HGSNATQ68CP4 663 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 ZNF438Q7Z4V0 828 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 DZANK1Q9NVP4 752 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 SALL4Q9UJQ4 1053 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 SOX13Q9UN79 622 aa7.1□□□□□ -1.27
SMN2-205ENST00000505346 TNFRSF10BO14763 440 aa7.09□□□□□ -1.27
SMN2-205ENST00000505346 CES1P23141 567 aa7.09□□□□□ -1.27
SMN2-205ENST00000505346 SOX4Q06945 474 aaPredicted RBP7.09□□□□□ -1.27
SMN2-205ENST00000505346 ZNF792Q3KQV3 632 aa7.09□□□□□ -1.27
SMN2-205ENST00000505346 STK11IPQ8N1F8 1099 aa7.09□□□□□ -1.27
SMN2-205ENST00000505346 C2CD4AQ8NCU7 369 aaPredicted RBP7.09□□□□□ -1.27
SMN2-205ENST00000505346 BSNDQ8WZ55 320 aa7.09□□□□□ -1.27
SMN2-205ENST00000505346 EZH1Q92800 747 aaPredicted RBP7.09□□□□□ -1.27
SMN2-205ENST00000505346 TMEM63CQ9P1W3 806 aa7.09□□□□□ -1.27
SMN2-205ENST00000505346 STIM2Q9P246 746 aa7.09□□□□□ -1.27
SMN2-205ENST00000505346 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
SMN2-205ENST00000505346 MAP7Q14244 749 aa7.08□□□□□ -1.28
SMN2-205ENST00000505346 NAA30Q147X3 362 aaPredicted RBP7.08□□□□□ -1.28
SMN2-205ENST00000505346 KRTAP19-4Q3LI73 84 aa7.08□□□□□ -1.28
SMN2-205ENST00000505346 BCL7CQ8WUZ0 217 aaPredicted RBP7.08□□□□□ -1.28
SMN2-205ENST00000505346 CNTN3Q9P232 1028 aa7.08□□□□□ -1.28
SMN2-205ENST00000505346 CARMIL2Q6F5E8 1435 aa7.08□□□□□ -1.28
SMN2-205ENST00000505346 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
SMN2-205ENST00000505346 TRPA1O75762 1119 aa7.07□□□□□ -1.28
SMN2-205ENST00000505346 RPLP1P05386 114 aaKnown RBP7.07□□□□□ -1.28
SMN2-205ENST00000505346 ZNF765Q7L2R6 523 aa7.07□□□□□ -1.28
SMN2-205ENST00000505346 ATG4DQ86TL0 474 aaPredicted RBP7.07□□□□□ -1.28
SMN2-205ENST00000505346 ABTB2Q8N961 1025 aa7.07□□□□□ -1.28
SMN2-205ENST00000505346 PMEPA1Q969W9 287 aa7.07□□□□□ -1.28
SMN2-205ENST00000505346 ATG7O95352 703 aa7.06□□□□□ -1.28
SMN2-205ENST00000505346 DLGAP3O95886 979 aa7.06□□□□□ -1.28
SMN2-205ENST00000505346 ACPPP15309 386 aa7.06□□□□□ -1.28
SMN2-205ENST00000505346 TMEM102Q8N9M5 508 aaPredicted RBP7.06□□□□□ -1.28
SMN2-205ENST00000505346 CCER1Q8TC90 406 aaPredicted RBP7.06□□□□□ -1.28
SMN2-205ENST00000505346 TMEM40Q8WWA1 233 aa7.06□□□□□ -1.28
SMN2-205ENST00000505346 FAM168AQ92567 244 aa7.06□□□□□ -1.28
SMN2-205ENST00000505346 GATA6Q92908 595 aa7.06□□□□□ -1.28
SMN2-205ENST00000505346 NUDT16Q96DE0 195 aaKnown RBP7.06□□□□□ -1.28
SMN2-205ENST00000505346 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
SMN2-205ENST00000505346 NFICP08651 508 aa7.05□□□□□ -1.28
SMN2-205ENST00000505346 C1orf127Q8N9H9 656 aa7.05□□□□□ -1.28
SMN2-205ENST00000505346 TTC16Q8NEE8 873 aa7.05□□□□□ -1.28
SMN2-205ENST00000505346 NXPE3Q969Y0 559 aa7.05□□□□□ -1.28
SMN2-205ENST00000505346 CCDC97Q96F63 343 aaPredicted RBP7.05□□□□□ -1.28
SMN2-205ENST00000505346 HHIPQ96QV1 700 aa7.05□□□□□ -1.28
SMN2-205ENST00000505346 MKNK1Q9BUB5 465 aa7.05□□□□□ -1.28
SMN2-205ENST00000505346 SOX17Q9H6I2 414 aaPredicted RBP7.05□□□□□ -1.28
SMN2-205ENST00000505346 ZBTB39O15060 712 aa7.04□□□□□ -1.28
SMN2-205ENST00000505346 OCLNQ16625 522 aa7.04□□□□□ -1.28
SMN2-205ENST00000505346 VN1R5Q7Z5H4 357 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms