RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 FLIIQ13045 1269 aa8.62□□□□□ -1.03
SSBP2-204ENST00000504985 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
SSBP2-204ENST00000504985 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
SSBP2-204ENST00000504985 C1orf53Q5VUE5 145 aa8.62□□□□□ -1.03
SSBP2-204ENST00000504985 WWC1Q8IX03 1113 aa8.62□□□□□ -1.03
SSBP2-204ENST00000504985 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.62□□□□□ -1.03
SSBP2-204ENST00000504985 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
SSBP2-204ENST00000504985 TRIM44Q96DX7 344 aaPredicted RBP8.62□□□□□ -1.03
SSBP2-204ENST00000504985 GJA3Q9Y6H8 435 aa8.62□□□□□ -1.03
SSBP2-204ENST00000504985 DIP2AQ14689 1571 aa8.62□□□□□ -1.03
SSBP2-204ENST00000504985 USP17L3A6NCW0 530 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 USP17L4A6NCW7 530 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 CLGNO14967 610 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 LTKP29376 864 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 TBCELQ5QJ74 424 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 CCDC102BQ68D86 513 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 LRRC69Q6ZNQ3 347 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 USP17L1Q7RTZ2 530 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 TNFRSF25Q93038 417 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 TRAK1Q9UPV9 953 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 METP08581 1390 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 LRPPRCP42704 1394 aaKnown RBP8.61□□□□□ -1.03
SSBP2-204ENST00000504985 SERTM1A2A2V5 107 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 PTMAP06454 111 aaKnown RBP8.61□□□□□ -1.03
SSBP2-204ENST00000504985 KCNQ4P56696 695 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 TMF1P82094 1093 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 PSME1Q06323 249 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 SFSWAPQ12872 951 aaKnown RBP8.61□□□□□ -1.03
SSBP2-204ENST00000504985 SYT9Q86SS6 491 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 LARGE2Q8N3Y3 721 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 TPCN2Q8NHX9 752 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
SSBP2-204ENST00000504985 TECPR2O15040 1411 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 MED1Q15648 1581 aaPredicted RBP8.6□□□□□ -1.03
SSBP2-204ENST00000504985 ATP9BO43861 1147 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 RAD21O60216 631 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 FURINP09958 794 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 ATP1A2P50993 1020 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 PSMA6P60900 246 aaKnown RBP8.6□□□□□ -1.03
SSBP2-204ENST00000504985 XP32Q5T750 250 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 SIX5Q8N196 739 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 SLC30A3Q99726 388 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 POLR3GLQ9BT43 218 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
SSBP2-204ENST00000504985 XRN1Q8IZH2 1706 aaKnown RBP8.59□□□□□ -1.03
SSBP2-204ENST00000504985 IQSEC2Q5JU85 1478 aa8.59□□□□□ -1.03
SSBP2-204ENST00000504985 LTBP4Q8N2S1 1624 aa8.59□□□□□ -1.03
SSBP2-204ENST00000504985 FRAT1Q92837 279 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-204ENST00000504985 PLVAPQ9BX97 442 aa8.59□□□□□ -1.03
SSBP2-204ENST00000504985 TSPAN10Q9H1Z9 355 aaPredicted RBP8.59□□□□□ -1.03
SSBP2-204ENST00000504985 STARD13Q9Y3M8 1113 aa8.59□□□□□ -1.03
SSBP2-204ENST00000504985 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 PTPRUQ92729 1446 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 C21orf2O43822 256 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 ITGB7P26010 798 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 AXDND1Q5T1B0 1012 aaPredicted RBP8.58□□□□□ -1.04
SSBP2-204ENST00000504985 TXNDC2Q86VQ3 553 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 THEMISQ8N1K5 641 aaPredicted RBP8.58□□□□□ -1.04
SSBP2-204ENST00000504985 STAG2Q8N3U4 1231 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 FNBP4Q8N3X1 1017 aaPredicted RBP8.58□□□□□ -1.04
SSBP2-204ENST00000504985 OGFOD1Q8N543 542 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 STK26Q9P289 416 aa8.58□□□□□ -1.04
SSBP2-204ENST00000504985 PLEKHH1Q9ULM0 1364 aa8.57□□□□□ -1.04
SSBP2-204ENST00000504985 SETD1BQ9UPS6 1966 aaKnown RBP8.57□□□□□ -1.04
SSBP2-204ENST00000504985 PALM3A6NDB9 673 aaPredicted RBP8.57□□□□□ -1.04
SSBP2-204ENST00000504985 ANP32CO43423 234 aa8.57□□□□□ -1.04
SSBP2-204ENST00000504985 KIF20AO95235 890 aa8.57□□□□□ -1.04
SSBP2-204ENST00000504985 TERF1P54274 439 aa8.57□□□□□ -1.04
SSBP2-204ENST00000504985 SECISBP2LQ93073 1101 aaKnown RBP8.57□□□□□ -1.04
SSBP2-204ENST00000504985 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
SSBP2-204ENST00000504985 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
SSBP2-204ENST00000504985 LAS1LQ9Y4W2 734 aaKnown RBP8.57□□□□□ -1.04
SSBP2-204ENST00000504985 EID1Q9Y6B2 187 aa8.57□□□□□ -1.04
SSBP2-204ENST00000504985 ADGRB2O60241 1585 aa8.56□□□□□ -1.04
SSBP2-204ENST00000504985 FAM135BQ49AJ0 1406 aa8.56□□□□□ -1.04
SSBP2-204ENST00000504985 SPATA31C1P0DKV0 1188 aa8.56□□□□□ -1.04
SSBP2-204ENST00000504985 PRAM1Q96QH2 718 aa8.56□□□□□ -1.04
SSBP2-204ENST00000504985 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-204ENST00000504985 GOLGA6L3A6NEY3 463 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 ALAS2P22557 587 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 CDCA8Q53HL2 280 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 PHACTR1Q9C0D0 580 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 PRKRIP1Q9H875 184 aaPredicted RBP8.55□□□□□ -1.04
SSBP2-204ENST00000504985 ROBO2Q9HCK4 1378 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 PTCH1Q13635 1447 aa8.55□□□□□ -1.04
SSBP2-204ENST00000504985 USP32Q8NFA0 1604 aa8.54□□□□□ -1.04
SSBP2-204ENST00000504985 IRX3P78415 501 aaPredicted RBP8.54□□□□□ -1.04
SSBP2-204ENST00000504985 TYRO3Q06418 890 aa8.54□□□□□ -1.04
SSBP2-204ENST00000504985 SAFB2Q14151 953 aaKnown RBP eCLIP8.54□□□□□ -1.04
SSBP2-204ENST00000504985 MICALL1Q8N3F8 863 aa8.54□□□□□ -1.04
SSBP2-204ENST00000504985 ZNF280CQ8ND82 737 aa8.54□□□□□ -1.04
SSBP2-204ENST00000504985 ANKIB1Q9P2G1 1089 aa8.54□□□□□ -1.04
SSBP2-204ENST00000504985 HCN4Q9Y3Q4 1203 aa8.54□□□□□ -1.04
SSBP2-204ENST00000504985 CHD2O14647 1828 aaKnown RBP8.53□□□□□ -1.04
SSBP2-204ENST00000504985 SPEM2Q0P670 501 aa8.53□□□□□ -1.04
SSBP2-204ENST00000504985 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms