RNA–Protein interactions for RNA: ENST00000503934.5

CCHCR1-218, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-218ENST00000503934 FAM205AQ6ZU69 1335 aa23.55■■□□□ 1.36
CCHCR1-218ENST00000503934 SCARF1Q14162 830 aa23.54■■□□□ 1.36
CCHCR1-218ENST00000503934 ZAP70P43403 619 aa23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 TTF1Q15361 905 aaPredicted RBP23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 TTC22Q5TAA0 569 aa23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 STRIP1Q5VSL9 837 aa23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 TTLL5Q6EMB2 1281 aa23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 SKAP1Q86WV1 359 aa23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 TBC1D22AQ8WUA7 517 aa23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 SNRKQ9NRH2 765 aa23.53■■□□□ 1.36
CCHCR1-218ENST00000503934 USP17L3A6NCW0 530 aa23.52■■□□□ 1.36
CCHCR1-218ENST00000503934 USP17L4A6NCW7 530 aa23.52■■□□□ 1.36
CCHCR1-218ENST00000503934 FZD9O00144 591 aa23.52■■□□□ 1.36
CCHCR1-218ENST00000503934 IGSF3O75054 1194 aa23.52■■□□□ 1.36
CCHCR1-218ENST00000503934 GTF2IP78347 998 aa23.52■■□□□ 1.36
CCHCR1-218ENST00000503934 USP17L1Q7RTZ2 530 aa23.52■■□□□ 1.36
CCHCR1-218ENST00000503934 ZGPATQ8N5A5 531 aaKnown RBP23.52■■□□□ 1.36
CCHCR1-218ENST00000503934 YDJCA8MPS7 323 aa23.51■■□□□ 1.35
CCHCR1-218ENST00000503934 FKBP1AP62942 108 aaKnown RBP23.51■■□□□ 1.35
CCHCR1-218ENST00000503934 CHAF1AQ13111 956 aaPredicted RBP23.51■■□□□ 1.35
CCHCR1-218ENST00000503934 DNAJC2Q99543 621 aaKnown RBP23.51■■□□□ 1.35
CCHCR1-218ENST00000503934 PAG1Q9NWQ8 432 aa23.51■■□□□ 1.35
CCHCR1-218ENST00000503934 RNF181Q9P0P0 153 aa23.51■■□□□ 1.35
CCHCR1-218ENST00000503934 SALL1Q9NSC2 1324 aa23.51■■□□□ 1.35
CCHCR1-218ENST00000503934 CYP2E1P05181 493 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 EIF6P56537 245 aaKnown RBP23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 TNIP1Q15025 636 aa23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 C9orf131Q5VYM1 1079 aa23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 SPTY2D1Q68D10 685 aaPredicted RBP23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 PI16Q6UXB8 463 aa23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 TICAM2Q86XR7 235 aa23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 EVI5LQ96CN4 794 aa23.5■■□□□ 1.35
CCHCR1-218ENST00000503934 BMP2KLQ5H9B9 411 aa23.49■■□□□ 1.35
CCHCR1-218ENST00000503934 CIAPIN1Q6FI81 312 aa23.49■■□□□ 1.35
CCHCR1-218ENST00000503934 CNTROBQ8N137 903 aa23.49■■□□□ 1.35
CCHCR1-218ENST00000503934 KCNQ5Q9NR82 932 aa23.49■■□□□ 1.35
CCHCR1-218ENST00000503934 SUGT1Q9Y2Z0 365 aa23.49■■□□□ 1.35
CCHCR1-218ENST00000503934 GOLIM4O00461 696 aa23.48■■□□□ 1.35
CCHCR1-218ENST00000503934 VIL1P09327 827 aaKnown RBP23.48■■□□□ 1.35
CCHCR1-218ENST00000503934 CXCL9Q07325 125 aa23.48■■□□□ 1.35
CCHCR1-218ENST00000503934 COL4A5P29400 1685 aa23.48■■□□□ 1.35
CCHCR1-218ENST00000503934 TRIM6-TRIM34B2RNG4 842 aa23.47■■□□□ 1.35
CCHCR1-218ENST00000503934 MFSD14BQ5SR56 506 aa23.47■■□□□ 1.35
CCHCR1-218ENST00000503934 DACT2Q5SW24 774 aa23.47■■□□□ 1.35
CCHCR1-218ENST00000503934 FBXW7Q969H0 707 aa23.47■■□□□ 1.35
CCHCR1-218ENST00000503934 ZC3H4Q9UPT8 1303 aaKnown RBP23.47■■□□□ 1.35
CCHCR1-218ENST00000503934 RAD17O75943 681 aa23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 COL1A1P02452 1464 aaPredicted RBP23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 GSPT1P15170 499 aaKnown RBP23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 LRRFIP1Q32MZ4 808 aaKnown RBP23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 TMED8Q6PL24 325 aaPredicted RBP23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 KBTBD3Q8NAB2 608 aa23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 MYO3BQ8WXR4 1341 aa23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 ANTXR1Q9H6X2 564 aa23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 LRP2BPQ9P2M1 347 aa23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 ABCF2Q9UG63 623 aa23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 NDUFB9Q9Y6M9 179 aa23.46■■□□□ 1.35
CCHCR1-218ENST00000503934 PSMD14O00487 310 aa23.45■■□□□ 1.34
CCHCR1-218ENST00000503934 MAP4K4O95819 1239 aaPredicted RBP23.45■■□□□ 1.34
CCHCR1-218ENST00000503934 RSBN1LQ6PCB5 846 aaPredicted RBP23.45■■□□□ 1.34
CCHCR1-218ENST00000503934 TBC1D9Q6ZT07 1266 aa23.45■■□□□ 1.34
CCHCR1-218ENST00000503934 ERICH6Q7L0X2 663 aa23.45■■□□□ 1.34
CCHCR1-218ENST00000503934 RILPL2Q969X0 211 aa23.45■■□□□ 1.34
CCHCR1-218ENST00000503934 JAG2Q9Y219 1238 aa23.45■■□□□ 1.34
CCHCR1-218ENST00000503934 AKAP11Q9UKA4 1901 aa23.44■■□□□ 1.34
CCHCR1-218ENST00000503934 LDHBP07195 334 aaKnown RBP23.44■■□□□ 1.34
CCHCR1-218ENST00000503934 SDSP20132 328 aa23.44■■□□□ 1.34
CCHCR1-218ENST00000503934 MAP3K12Q12852 859 aa23.44■■□□□ 1.34
CCHCR1-218ENST00000503934 AGBL3Q8NEM8 1001 aa23.44■■□□□ 1.34
CCHCR1-218ENST00000503934 EDC3Q96F86 508 aaKnown RBP23.44■■□□□ 1.34
CCHCR1-218ENST00000503934 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.44■■□□□ 1.342e-6■■■□□ 15.9
CCHCR1-218ENST00000503934 PIH1D3Q9NQM4 214 aaKnown RBP23.44■■□□□ 1.34
CCHCR1-218ENST00000503934 SBF1O95248 1867 aa23.43■■□□□ 1.34
CCHCR1-218ENST00000503934 MMP14P50281 582 aa23.43■■□□□ 1.34
CCHCR1-218ENST00000503934 ZSCAN25Q6NSZ9 544 aa23.43■■□□□ 1.34
CCHCR1-218ENST00000503934 RPS12P25398 132 aaKnown RBP23.42■■□□□ 1.34
CCHCR1-218ENST00000503934 DPY19L2Q6NUT2 758 aa23.42■■□□□ 1.34
CCHCR1-218ENST00000503934 CERS5Q8N5B7 392 aa23.42■■□□□ 1.34
CCHCR1-218ENST00000503934 FSD1Q9BTV5 496 aa23.42■■□□□ 1.34
CCHCR1-218ENST00000503934 RAI14Q9P0K7 980 aa23.42■■□□□ 1.34
CCHCR1-218ENST00000503934 CHD4Q14839 1912 aa23.41■■□□□ 1.34
CCHCR1-218ENST00000503934 DICER1Q9UPY3 1922 aaKnown RBP23.41■■□□□ 1.34
CCHCR1-218ENST00000503934 IDH1O75874 414 aaKnown RBP23.41■■□□□ 1.34
CCHCR1-218ENST00000503934 ZFYP08048 801 aaPredicted RBP23.41■■□□□ 1.34
CCHCR1-218ENST00000503934 GPC2Q8N158 579 aa23.41■■□□□ 1.34
CCHCR1-218ENST00000503934 MRIQ9BWK5 157 aa23.41■■□□□ 1.34
CCHCR1-218ENST00000503934 MAST3O60307 1309 aa23.4■■□□□ 1.34
CCHCR1-218ENST00000503934 HIP1O00291 1037 aa23.4■■□□□ 1.34
CCHCR1-218ENST00000503934 PRDX5P30044 214 aa23.4■■□□□ 1.34
CCHCR1-218ENST00000503934 SLF2Q8IX21 1173 aa23.4■■□□□ 1.34
CCHCR1-218ENST00000503934 DPF2Q92785 391 aa23.4■■□□□ 1.34
CCHCR1-218ENST00000503934 GMLQ99445 158 aa23.4■■□□□ 1.34
CCHCR1-218ENST00000503934 CCDC88AQ3V6T2 1871 aa23.4■■□□□ 1.34
CCHCR1-218ENST00000503934 GSTO1P78417 241 aa23.39■■□□□ 1.33
CCHCR1-218ENST00000503934 HDLBPQ00341 1268 aaKnown RBP23.39■■□□□ 1.33
CCHCR1-218ENST00000503934 MXD3Q9BW11 206 aa23.39■■□□□ 1.33
CCHCR1-218ENST00000503934 GJA3Q9Y6H8 435 aa23.39■■□□□ 1.33
CCHCR1-218ENST00000503934 RFX7Q2KHR2 1363 aa23.39■■□□□ 1.33
CCHCR1-218ENST00000503934 ZNF541Q9H0D2 1346 aa23.38■■□□□ 1.33
CCHCR1-218ENST00000503934 SCN9AQ15858 1988 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms