RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 VN1R5Q7Z5H4 357 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 ALYREFQ86V81 257 aaKnown RBP10.04□□□□□ -0.8
NIPBL-203ENST00000503274 MAP4K3Q8IVH8 894 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 FMR1NBQ8N0W7 255 aaPredicted RBP10.04□□□□□ -0.8
NIPBL-203ENST00000503274 DCAF5Q96JK2 942 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 PODXL2Q9NZ53 605 aa10.04□□□□□ -0.8
NIPBL-203ENST00000503274 SPATA31C1P0DKV0 1188 aa10.03□□□□□ -0.8
NIPBL-203ENST00000503274 GNA15P30679 374 aa10.03□□□□□ -0.8
NIPBL-203ENST00000503274 TAGLNQ01995 201 aaKnown RBP10.03□□□□□ -0.8
NIPBL-203ENST00000503274 FBXO11Q86XK2 927 aa10.03□□□□□ -0.8
NIPBL-203ENST00000503274 OSBPL7Q9BZF2 842 aa10.03□□□□□ -0.8
NIPBL-203ENST00000503274 SRCIN1Q9C0H9 1055 aa10.03□□□□□ -0.8
NIPBL-203ENST00000503274 DEAF1O75398 565 aaPredicted RBP10.02□□□□□ -0.81
NIPBL-203ENST00000503274 ITPKAP23677 461 aa10.02□□□□□ -0.81
NIPBL-203ENST00000503274 PTPN12Q05209 780 aaKnown RBP10.02□□□□□ -0.81
NIPBL-203ENST00000503274 SETDB1Q15047 1291 aa10.02□□□□□ -0.81
NIPBL-203ENST00000503274 RNF19AQ9NV58 838 aa10.02□□□□□ -0.81
NIPBL-203ENST00000503274 PARP2Q9UGN5 583 aa10.02□□□□□ -0.81
NIPBL-203ENST00000503274 FSCN2O14926 492 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 ITGB2P05107 769 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 ELNP15502 786 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 FCGRTP55899 365 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 PIP4K2BP78356 416 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 XPCQ01831 940 aaPredicted RBP10.01□□□□□ -0.81
NIPBL-203ENST00000503274 IKBKEQ14164 716 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 ZNF326Q5BKZ1 582 aaKnown RBP10.01□□□□□ -0.81
NIPBL-203ENST00000503274 GIPC2Q8TF65 315 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 WNT8BQ93098 351 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 CLEC4MQ9H2X3 399 aaPredicted RBP10.01□□□□□ -0.81
NIPBL-203ENST00000503274 C12orf49Q9H741 205 aa10.01□□□□□ -0.81
NIPBL-203ENST00000503274 PLA2G4EQ3MJ16 856 aa10□□□□□ -0.81
NIPBL-203ENST00000503274 DTHD1Q6ZMT9 781 aa10□□□□□ -0.81
NIPBL-203ENST00000503274 ZNF576Q9H609 170 aa10□□□□□ -0.81
NIPBL-203ENST00000503274 ZFYVE1Q9HBF4 777 aa10□□□□□ -0.81
NIPBL-203ENST00000503274 SOX1O00570 391 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-203ENST00000503274 ESRRAP11474 423 aaPredicted RBP9.99□□□□□ -0.81
NIPBL-203ENST00000503274 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
NIPBL-203ENST00000503274 ARL4DP49703 201 aa9.99□□□□□ -0.81
NIPBL-203ENST00000503274 PCDH1Q08174 1060 aa9.99□□□□□ -0.81
NIPBL-203ENST00000503274 RGS22Q8NE09 1264 aa9.99□□□□□ -0.81
NIPBL-203ENST00000503274 DCAF11Q8TEB1 546 aa9.99□□□□□ -0.81
NIPBL-203ENST00000503274 CARD10Q9BWT7 1032 aa9.99□□□□□ -0.81
NIPBL-203ENST00000503274 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
NIPBL-203ENST00000503274 SEC31BQ9NQW1 1179 aa9.99□□□□□ -0.81
NIPBL-203ENST00000503274 DLL1O00548 723 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 EIF4BP23588 611 aaKnown RBP9.98□□□□□ -0.81
NIPBL-203ENST00000503274 GSTT1P30711 240 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 DAB2P98082 770 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 PSMD2Q13200 908 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 GRIK4Q16099 956 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 KLHL23Q8NBE8 558 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 GALNT11Q8NCW6 608 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 SLC7A3Q8WY07 619 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 FAM8A1Q9UBU6 413 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 AK5Q9Y6K8 562 aa9.98□□□□□ -0.81
NIPBL-203ENST00000503274 C19orf57Q0VDD7 668 aa9.97□□□□□ -0.81
NIPBL-203ENST00000503274 ZNF423Q2M1K9 1284 aa9.97□□□□□ -0.81
NIPBL-203ENST00000503274 RPS26P11Q5JNZ5 115 aaPredicted RBP9.97□□□□□ -0.81
NIPBL-203ENST00000503274 TMC4Q7Z404 712 aa9.97□□□□□ -0.81
NIPBL-203ENST00000503274 KLHDC7BQ96G42 594 aa9.97□□□□□ -0.81
NIPBL-203ENST00000503274 KRBA1A5PL33 1030 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 TM4SF5O14894 197 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 APBA3O96018 575 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 CD68P34810 354 aaPredicted RBP9.96□□□□□ -0.82
NIPBL-203ENST00000503274 HGSNATQ68CP4 663 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 IGF2-ASQ6U949 168 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 C3orf58Q8NDZ4 430 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 FAM161BQ96MY7 647 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 NACC1Q96RE7 527 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 SOX17Q9H6I2 414 aaPredicted RBP9.96□□□□□ -0.82
NIPBL-203ENST00000503274 AKAP2Q9Y2D5 859 aa9.96□□□□□ -0.82
NIPBL-203ENST00000503274 USP17L7P0C7H9 530 aa9.95□□□□□ -0.82
NIPBL-203ENST00000503274 ZNF16P17020 682 aaPredicted RBP9.95□□□□□ -0.82
NIPBL-203ENST00000503274 RBM47A0AV96 593 aaKnown RBP9.94□□□□□ -0.82
NIPBL-203ENST00000503274 B3GALT4O96024 378 aa9.94□□□□□ -0.82
NIPBL-203ENST00000503274 SELPP16109 830 aa9.94□□□□□ -0.82
NIPBL-203ENST00000503274 SHISA2Q6UWI4 295 aa9.94□□□□□ -0.82
NIPBL-203ENST00000503274 MRS2Q9HD23 443 aa9.94□□□□□ -0.82
NIPBL-203ENST00000503274 C9orf172C9J069 976 aa9.93□□□□□ -0.82
NIPBL-203ENST00000503274 SORBS3O60504 671 aa9.93□□□□□ -0.82
NIPBL-203ENST00000503274 EIF4EBP3O60516 100 aaPredicted RBP9.93□□□□□ -0.82
NIPBL-203ENST00000503274 ITGAEP38570 1179 aa9.93□□□□□ -0.82
NIPBL-203ENST00000503274 GSTM4Q03013 218 aa9.93□□□□□ -0.82
NIPBL-203ENST00000503274 FAAP100Q0VG06 881 aa9.93□□□□□ -0.82
NIPBL-203ENST00000503274 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
NIPBL-203ENST00000503274 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
NIPBL-203ENST00000503274 FOXD4L4Q8WXT5 416 aaPredicted RBP9.93□□□□□ -0.82
NIPBL-203ENST00000503274 LENG1Q96BZ8 264 aaPredicted RBP9.93□□□□□ -0.82
NIPBL-203ENST00000503274 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
NIPBL-203ENST00000503274 KCNK4Q9NYG8 393 aa9.93□□□□□ -0.82
NIPBL-203ENST00000503274 MSTNO14793 375 aa9.92□□□□□ -0.82
NIPBL-203ENST00000503274 DDX3YO15523 660 aaKnown RBP9.92□□□□□ -0.82
NIPBL-203ENST00000503274 DDX54Q8TDD1 881 aaKnown RBP9.92□□□□□ -0.82
NIPBL-203ENST00000503274 SPOCK3Q9BQ16 436 aa9.92□□□□□ -0.82
NIPBL-203ENST00000503274 PPM1HQ9ULR3 514 aa9.92□□□□□ -0.82
NIPBL-203ENST00000503274 ADAM11O75078 769 aa9.91□□□□□ -0.82
NIPBL-203ENST00000503274 PROCP04070 461 aa9.91□□□□□ -0.82
NIPBL-203ENST00000503274 NRG1Q02297 640 aaPredicted RBP9.91□□□□□ -0.82
NIPBL-203ENST00000503274 MRPL18Q9H0U6 180 aaKnown RBP9.91□□□□□ -0.82
NIPBL-203ENST00000503274 GPN3Q9UHW5 284 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms