RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 WDR19Q8NEZ3 1342 aa19.43■□□□□ 0.7
VCAN-204ENST00000502527 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
VCAN-204ENST00000502527 ANO6Q4KMQ2 910 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 RALYLQ86SE5 291 aaKnown RBP19.42■□□□□ 0.7
VCAN-204ENST00000502527 VGLL2Q8N8G2 317 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 PIBF1Q8WXW3 757 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 ITGB4P16144 1822 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 GOLGA6L6A8MZA4 724 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 PDE8BO95263 885 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 CAVIN2O95810 425 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 ADD2P35612 726 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 CEBPZQ03701 1054 aaKnown RBP19.42■□□□□ 0.7
VCAN-204ENST00000502527 MPNDQ8N594 471 aa19.42■□□□□ 0.7
VCAN-204ENST00000502527 ZNF830Q96NB3 372 aaPredicted RBP19.42■□□□□ 0.7
VCAN-204ENST00000502527 DZIP3Q86Y13 1208 aaKnown RBP19.41■□□□□ 0.7
VCAN-204ENST00000502527 SYTL4Q96C24 671 aaPredicted RBP19.41■□□□□ 0.7
VCAN-204ENST00000502527 TTC12Q9H892 705 aaPredicted RBP19.41■□□□□ 0.7
VCAN-204ENST00000502527 CBX8Q9HC52 389 aa19.41■□□□□ 0.7
VCAN-204ENST00000502527 CTAGE5O15320 804 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 FDPSP14324 419 aaKnown RBP19.4■□□□□ 0.7
VCAN-204ENST00000502527 SLC9C2Q5TAH2 1124 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 LUZP1Q86V48 1076 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 USP28Q96RU2 1077 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 GPHNQ9NQX3 736 aaPredicted RBP19.4■□□□□ 0.7
VCAN-204ENST00000502527 KLF18A0A0U1RQI7 1052 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 UQCRFS1P1P0C7P4 283 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 UBE3CQ15386 1083 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 CCAR1Q8IX12 1150 aaKnown RBP19.4■□□□□ 0.7
VCAN-204ENST00000502527 AK7Q96M32 723 aa19.4■□□□□ 0.7
VCAN-204ENST00000502527 COL14A1Q05707 1796 aaKnown RBP19.4■□□□□ 0.7
VCAN-204ENST00000502527 ZNF34Q8IZ26 560 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 NWD2Q9ULI1 1742 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 GOLGA8BA8MQT2 603 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 GUCY1B3Q02153 619 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 TRDNQ13061 729 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 CCDC73Q6ZRK6 1079 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 TBC1D2BQ9UPU7 963 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 ATRNO75882 1429 aa19.39■□□□□ 0.69
VCAN-204ENST00000502527 MROH5Q6ZUA9 1318 aa19.38■□□□□ 0.69
VCAN-204ENST00000502527 ARID4AP29374 1257 aaPredicted RBP19.38■□□□□ 0.69
VCAN-204ENST00000502527 ANTXR2P58335 489 aa19.38■□□□□ 0.69
VCAN-204ENST00000502527 NOLC1Q14978 699 aaKnown RBP eCLIP19.38■□□□□ 0.69
VCAN-204ENST00000502527 PUM3Q15397 648 aaKnown RBP19.38■□□□□ 0.69
VCAN-204ENST00000502527 CCDC102BQ68D86 513 aa19.38■□□□□ 0.69
VCAN-204ENST00000502527 ILDR1Q86SU0 546 aaPredicted RBP19.38■□□□□ 0.69
VCAN-204ENST00000502527 LPIN2Q92539 896 aa19.38■□□□□ 0.69
VCAN-204ENST00000502527 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.69
VCAN-204ENST00000502527 PIH1D3Q9NQM4 214 aaKnown RBP19.38■□□□□ 0.69
VCAN-204ENST00000502527 PPFIA3O75145 1194 aa19.37■□□□□ 0.69
VCAN-204ENST00000502527 IDH1O75874 414 aaKnown RBP19.37■□□□□ 0.69
VCAN-204ENST00000502527 ZNF165P49910 485 aa19.37■□□□□ 0.69
VCAN-204ENST00000502527 TDRD7Q8NHU6 1098 aaKnown RBP19.37■□□□□ 0.69
VCAN-204ENST00000502527 C8orf76Q96K31 380 aa19.37■□□□□ 0.69
VCAN-204ENST00000502527 HPS5Q9UPZ3 1129 aa19.37■□□□□ 0.69
VCAN-204ENST00000502527 ANKRD36CQ5JPF3 1778 aa19.37■□□□□ 0.69
VCAN-204ENST00000502527 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.37■□□□□ 0.69
VCAN-204ENST00000502527 UBN2Q6ZU65 1347 aa19.37■□□□□ 0.69
VCAN-204ENST00000502527 CPLX1O14810 134 aa19.37■□□□□ 0.69
VCAN-204ENST00000502527 PHKA1P46020 1223 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 ME1P48163 572 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 FAM160A1Q05DH4 1040 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 RTEL1Q9NZ71 1219 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 ORC3Q9UBD5 711 aaPredicted RBP19.36■□□□□ 0.69
VCAN-204ENST00000502527 KDM4FA0A1W2PPD8 638 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 KINO60870 393 aaKnown RBP19.36■□□□□ 0.69
VCAN-204ENST00000502527 PDE6AP16499 860 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 SPC24Q8NBT2 197 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 RGS22Q8NE09 1264 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 FBXO18Q8NFZ0 1043 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 DNAJC25Q9H1X3 360 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 SPTLC3Q9NUV7 552 aa19.36■□□□□ 0.69
VCAN-204ENST00000502527 ZNF532Q9HCE3 1301 aa19.35■□□□□ 0.69
VCAN-204ENST00000502527 RRP9O43818 475 aaKnown RBP19.35■□□□□ 0.69
VCAN-204ENST00000502527 APPP05067 770 aa19.35■□□□□ 0.69
VCAN-204ENST00000502527 FGFR2P21802 821 aa19.35■□□□□ 0.69
VCAN-204ENST00000502527 SNW1Q13573 536 aaKnown RBP19.35■□□□□ 0.69
VCAN-204ENST00000502527 GOLPH3LQ9H4A5 285 aa19.35■□□□□ 0.69
VCAN-204ENST00000502527 PLCH1Q4KWH8 1693 aa19.35■□□□□ 0.69
VCAN-204ENST00000502527 MYH15Q9Y2K3 1946 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 EIF5P55010 431 aaKnown RBP19.34■□□□□ 0.69
VCAN-204ENST00000502527 DNTTIP2Q5QJE6 756 aaKnown RBP19.34■□□□□ 0.69
VCAN-204ENST00000502527 BRAPQ7Z569 592 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 ENGASEQ8NFI3 743 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 CDCA7Q9BWT1 371 aaPredicted RBP19.34■□□□□ 0.69
VCAN-204ENST00000502527 ANGEL1Q9UNK9 670 aaKnown RBP19.34■□□□□ 0.69
VCAN-204ENST00000502527 MYH3P11055 1940 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 MYH7P12883 1935 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 AKAP11Q9UKA4 1901 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 SLC5A1P13866 664 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 FSIP1Q8NA03 581 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 NBPF3Q9H094 633 aa19.34■□□□□ 0.69
VCAN-204ENST00000502527 UQCRHLA0A096LP55 91 aa19.33■□□□□ 0.69
VCAN-204ENST00000502527 TCRBV5S4A2TA0A5A2 114 aa19.33■□□□□ 0.69
VCAN-204ENST00000502527 UQCRHP07919 91 aa19.33■□□□□ 0.69
VCAN-204ENST00000502527 STX1AQ16623 288 aa19.33■□□□□ 0.69
VCAN-204ENST00000502527 ADALQ6DHV7 355 aa19.33■□□□□ 0.69
VCAN-204ENST00000502527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.33■□□□□ 0.69
VCAN-204ENST00000502527 NUP98P52948 1817 aa19.33■□□□□ 0.68
VCAN-204ENST00000502527 A0A1W2PQ27 194 aa19.32■□□□□ 0.68
VCAN-204ENST00000502527 A0A1W2PQ64 194 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms