RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 PPP1R42Q7Z4L9 355 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 MSL3Q8N5Y2 521 aaKnown RBP12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 SYTL4Q96C24 671 aaPredicted RBP12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 PPP1R13BQ96KQ4 1090 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 IL1RAPL2Q9NP60 686 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 ORC3Q9UBD5 711 aaPredicted RBP12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 DNAI1Q9UI46 699 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 CHMP3Q9Y3E7 222 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 TAF1LQ8IZX4 1826 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 ZRSR1Q15695 479 aaKnown RBP12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 GPR161Q8N6U8 529 aaKnown RBP12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 PGBD1Q96JS3 809 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 TRIM34Q9BYJ4 488 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
AC055717.1-201ENST00000502221 VGLL3A8MV65 326 aa12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 ZBTB22O15209 634 aa12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 FAM160A1Q05DH4 1040 aa12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 RESTQ13127 1097 aa12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 ADCK5Q3MIX3 580 aa12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 DHX40Q8IX18 779 aaKnown RBP12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 RBM8AQ9Y5S9 174 aaKnown RBP12.79□□□□□ -0.36
AC055717.1-201ENST00000502221 NCAPD2Q15021 1401 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 H3BQV1 296 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 ZSCAN12O43309 604 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 MTX1Q13505 466 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 IFFO2Q5TF58 517 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 TRMT1Q9NXH9 659 aaKnown RBP12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 C5P01031 1676 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 SRGAP3O43295 1099 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 CBFA2T2O43439 604 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 PTH1RQ03431 593 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 E4F1Q66K89 784 aaPredicted RBP12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 FERMT3Q86UX7 667 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 NECAB1Q8N987 351 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 BRMS1Q9HCU9 246 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 TFIP11Q9UBB9 837 aaKnown RBP12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 USP16Q9Y5T5 823 aa12.78□□□□□ -0.36
AC055717.1-201ENST00000502221 KDRP35968 1356 aa12.77□□□□□ -0.36
AC055717.1-201ENST00000502221 SLC27A2O14975 620 aa12.77□□□□□ -0.37
AC055717.1-201ENST00000502221 HOXB7P09629 217 aa12.77□□□□□ -0.37
AC055717.1-201ENST00000502221 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.37
AC055717.1-201ENST00000502221 HOMER1Q86YM7 354 aa12.77□□□□□ -0.37
AC055717.1-201ENST00000502221 CCAR1Q8IX12 1150 aaKnown RBP12.77□□□□□ -0.37
AC055717.1-201ENST00000502221 FBXO18Q8NFZ0 1043 aa12.77□□□□□ -0.37
AC055717.1-201ENST00000502221 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.77□□□□□ -0.37
AC055717.1-201ENST00000502221 POTEB2H3BUK9 544 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 IFIT2P09913 472 aaKnown RBP12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 TATP17735 454 aaPredicted RBP12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 ZSCAN26Q16670 478 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 C11orf57Q6ZUT1 292 aaPredicted RBP12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 GTF3C6Q969F1 213 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 ARFGAP3Q9NP61 516 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 PNPLA7Q6ZV29 1317 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 A0A1W2PQ27 194 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 A0A1W2PQ64 194 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 A0A1W2PQD8 194 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 CYP27B1O15528 508 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 CPA1P15085 419 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 CASQ1P31415 396 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 TUBB2AQ13885 445 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 KRBA2Q6ZNG9 492 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 TICAM2Q86XR7 235 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 RGS22Q8NE09 1264 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 TUBB2BQ9BVA1 445 aa12.76□□□□□ -0.37
AC055717.1-201ENST00000502221 TADA3O75528 432 aa12.75□□□□□ -0.37
AC055717.1-201ENST00000502221 MAP4K4O95819 1239 aaPredicted RBP12.75□□□□□ -0.37
AC055717.1-201ENST00000502221 TUBBP07437 444 aa12.75□□□□□ -0.37
AC055717.1-201ENST00000502221 HMGB1P09429 215 aaKnown RBP12.75□□□□□ -0.37
AC055717.1-201ENST00000502221 DDX11Q96FC9 970 aa12.75□□□□□ -0.37
AC055717.1-201ENST00000502221 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
AC055717.1-201ENST00000502221 GEMIN8Q9NWZ8 242 aaKnown RBP12.75□□□□□ -0.37
AC055717.1-201ENST00000502221 IKBKBO14920 756 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 RPS6KA5O75582 802 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 SMC1AQ14683 1233 aaKnown RBP12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 BRD3Q15059 726 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 MTHFSDQ2M296 383 aaKnown RBP12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 LEKR1Q6ZMV7 388 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 ENGASEQ8NFI3 743 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 RABGGTAQ92696 567 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 ADCY9O60503 1353 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 RFX7Q2KHR2 1363 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 SMARCC2Q8TAQ2 1214 aa12.74□□□□□ -0.37
AC055717.1-201ENST00000502221 PCDH11XQ9BZA7 1347 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 PCDH11YQ9BZA8 1340 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 MYO1CO00159 1063 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 SMC2O95347 1197 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 TOB2Q14106 344 aaPredicted RBP12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 ARID5BQ14865 1188 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 CC2D1AQ6P1N0 951 aaPredicted RBP12.73□□□□□ -0.37
AC055717.1-201ENST00000502221 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms