RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 HINFPQ9BQA5 517 aa9.26□□□□□ -0.93
CRNDE-201ENST00000501177 PRDM6Q9NQX0 595 aa9.26□□□□□ -0.93
CRNDE-201ENST00000501177 A6NJR5 290 aa9.25□□□□□ -0.93
CRNDE-201ENST00000501177 GRNP28799 593 aaKnown RBP9.25□□□□□ -0.93
CRNDE-201ENST00000501177 EP400Q96L91 3159 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 ADAMTS13Q76LX8 1427 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L15C9J2P7 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L10C9JJH3 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L13C9JLJ4 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L12C9JPN9 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L11C9JVI0 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L21D6R901 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L18D6R9N7 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L22D6RA61 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L17D6RBQ6 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L19D6RCP7 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 BRINP3Q76B58 766 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 ARXQ96QS3 562 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 RRP7BPQ9NSQ0 103 aa9.24□□□□□ -0.93
CRNDE-201ENST00000501177 DMGDHQ9UI17 866 aaKnown RBP9.24□□□□□ -0.93
CRNDE-201ENST00000501177 XRN1Q8IZH2 1706 aaKnown RBP9.24□□□□□ -0.93
CRNDE-201ENST00000501177 LAMC1P11047 1609 aa9.23□□□□□ -0.93
CRNDE-201ENST00000501177 LMOD1P29536 600 aaPredicted RBP9.23□□□□□ -0.93
CRNDE-201ENST00000501177 NEUROD1Q13562 356 aa9.23□□□□□ -0.93
CRNDE-201ENST00000501177 RTN1Q16799 776 aa9.23□□□□□ -0.93
CRNDE-201ENST00000501177 ANKMY2Q8IV38 441 aa9.23□□□□□ -0.93
CRNDE-201ENST00000501177 LRRC59Q96AG4 307 aaKnown RBP9.23□□□□□ -0.93
CRNDE-201ENST00000501177 UNC13BO14795 1591 aa9.23□□□□□ -0.93
CRNDE-201ENST00000501177 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
CRNDE-201ENST00000501177 FAM196BA6NMK8 535 aa9.22□□□□□ -0.93
CRNDE-201ENST00000501177 GATA4P43694 442 aa9.22□□□□□ -0.93
CRNDE-201ENST00000501177 GSX2Q9BZM3 304 aa9.22□□□□□ -0.93
CRNDE-201ENST00000501177 QTRT2Q9H974 415 aaKnown RBP9.22□□□□□ -0.93
CRNDE-201ENST00000501177 PNPLA6Q8IY17 1366 aa9.22□□□□□ -0.93
CRNDE-201ENST00000501177 MST1RQ04912 1400 aa9.22□□□□□ -0.93
CRNDE-201ENST00000501177 IQGAP3Q86VI3 1631 aa9.21□□□□□ -0.93
CRNDE-201ENST00000501177 IGFBP4P22692 258 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 TBC1D8BQ0IIM8 1120 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 IER5Q5VY09 327 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 IGFLR1Q9H665 355 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 VRTNQ9H8Y1 702 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 KLK14Q9P0G3 267 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 SLC6A14Q9UN76 642 aa9.21□□□□□ -0.94
CRNDE-201ENST00000501177 LRP5O75197 1615 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 TGFBR3LH3BV60 316 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 GRIK4Q16099 956 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 PRRT3Q5FWE3 981 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 UBE2OQ9C0C9 1292 aaKnown RBP9.2□□□□□ -0.94
CRNDE-201ENST00000501177 SEMA6BQ9H3T3 888 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 NAGPAQ9UK23 515 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 PTCH1Q13635 1447 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 SETBP1Q9Y6X0 1596 aa9.2□□□□□ -0.94
CRNDE-201ENST00000501177 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
CRNDE-201ENST00000501177 CFAP70Q5T0N1 1121 aa9.19□□□□□ -0.94
CRNDE-201ENST00000501177 ADGRL3Q9HAR2 1447 aa9.19□□□□□ -0.94
CRNDE-201ENST00000501177 COL22A1Q8NFW1 1626 aaPredicted RBP9.19□□□□□ -0.94
CRNDE-201ENST00000501177 NRXN3Q9Y4C0 1643 aa9.19□□□□□ -0.94
CRNDE-201ENST00000501177 E9PCH4 1651 aa9.19□□□□□ -0.94
CRNDE-201ENST00000501177 NALCNQ8IZF0 1738 aa9.19□□□□□ -0.94
CRNDE-201ENST00000501177 MARF1Q9Y4F3 1742 aaKnown RBP9.19□□□□□ -0.94
CRNDE-201ENST00000501177 NFKB1P19838 968 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 WEE1P30291 646 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 HIF1AQ16665 826 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 Q8N3U1 123 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 NUDT8Q8WV74 236 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.18□□□□□ -0.94
CRNDE-201ENST00000501177 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 DNAJB12Q9NXW2 375 aaKnown RBP9.18□□□□□ -0.94
CRNDE-201ENST00000501177 TRPC5Q9UL62 973 aaPredicted RBP9.18□□□□□ -0.94
CRNDE-201ENST00000501177 ANKRD50Q9ULJ7 1429 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 AMOTL2Q9Y2J4 779 aa9.18□□□□□ -0.94
CRNDE-201ENST00000501177 SPHKAPQ2M3C7 1700 aa9.17□□□□□ -0.94
CRNDE-201ENST00000501177 PTPRUQ92729 1446 aa9.17□□□□□ -0.94
CRNDE-201ENST00000501177 LILRB5O75023 590 aa9.17□□□□□ -0.94
CRNDE-201ENST00000501177 INPP5BP32019 993 aa9.17□□□□□ -0.94
CRNDE-201ENST00000501177 TRIM28Q13263 835 aaKnown RBP9.17□□□□□ -0.94
CRNDE-201ENST00000501177 RSPO4Q2I0M5 234 aaPredicted RBP9.17□□□□□ -0.94
CRNDE-201ENST00000501177 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.17□□□□□ -0.94
CRNDE-201ENST00000501177 ATRNO75882 1429 aa9.16□□□□□ -0.94
CRNDE-201ENST00000501177 APBA3O96018 575 aa9.16□□□□□ -0.94
CRNDE-201ENST00000501177 DGKZQ13574 1117 aa9.16□□□□□ -0.94
CRNDE-201ENST00000501177 CCINQ13939 588 aa9.16□□□□□ -0.94
CRNDE-201ENST00000501177 CDCA8Q53HL2 280 aa9.16□□□□□ -0.94
CRNDE-201ENST00000501177 TRAPPC3LQ5T215 181 aa9.16□□□□□ -0.94
CRNDE-201ENST00000501177 JPH1Q9HDC5 661 aaPredicted RBP9.16□□□□□ -0.94
CRNDE-201ENST00000501177 IDH3AP50213 366 aa9.15□□□□□ -0.94
CRNDE-201ENST00000501177 NKAPLQ5M9Q1 402 aa9.15□□□□□ -0.94
CRNDE-201ENST00000501177 ZFATQ9P243 1243 aa9.15□□□□□ -0.94
CRNDE-201ENST00000501177 USP21Q9UK80 565 aa9.15□□□□□ -0.94
CRNDE-201ENST00000501177 A0A0A0MRY4 1105 aa9.14□□□□□ -0.95
CRNDE-201ENST00000501177 SELPP16109 830 aa9.14□□□□□ -0.95
CRNDE-201ENST00000501177 AFF1P51825 1210 aaKnown RBP9.14□□□□□ -0.95
CRNDE-201ENST00000501177 PSAPL1Q6NUJ1 521 aa9.14□□□□□ -0.95
CRNDE-201ENST00000501177 PNMA5Q96PV4 448 aa9.14□□□□□ -0.95
CRNDE-201ENST00000501177 C1orf167Q5SNV9 1468 aa9.14□□□□□ -0.95
CRNDE-201ENST00000501177 BLMP54132 1417 aaPredicted RBP9.14□□□□□ -0.95
CRNDE-201ENST00000501177 ZBTB42B2RXF5 422 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms