RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 GAPVD1Q14C86 1478 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 PLB1Q6P1J6 1458 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
PBX1-211ENST00000498497 CEP112Q8N8E3 955 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 CDC5LQ99459 802 aaKnown RBP13.3□□□□□ -0.28
PBX1-211ENST00000498497 CAPS2Q9BXY5 557 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 SNUPNO95149 360 aaKnown RBP13.3□□□□□ -0.28
PBX1-211ENST00000498497 SCNN1BP51168 640 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 FANCCQ00597 558 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
PBX1-211ENST00000498497 CCDC40Q4G0X9 1142 aa13.3□□□□□ -0.28
PBX1-211ENST00000498497 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 A0A1B0GVG6 124 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 C21orf2O43822 256 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 RAB11FIP3O75154 756 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 CNGA1P29973 690 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 LMBR1Q8WVP7 490 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 MRPL44Q9H9J2 332 aaKnown RBP13.29□□□□□ -0.28
PBX1-211ENST00000498497 HAUS2Q9NVX0 235 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 HYPKQ9NX55 129 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 RTEL1Q9NZ71 1219 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 ENC1O14682 589 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 ZSCAN12O43309 604 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 SYF2O95926 243 aaKnown RBP13.29□□□□□ -0.28
PBX1-211ENST00000498497 RPS6KA3P51812 740 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 SEC24CP53992 1094 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 PREPLQ4J6C6 727 aaPredicted RBP13.29□□□□□ -0.28
PBX1-211ENST00000498497 NUTM2DQ5VT03 806 aaPredicted RBP13.29□□□□□ -0.28
PBX1-211ENST00000498497 SAAL1Q96ER3 474 aa13.29□□□□□ -0.28
PBX1-211ENST00000498497 RPS6KA5O75582 802 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 HSPA4P34932 840 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 CRYMQ14894 314 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 MBIPQ9NS73 344 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 CUTAO60888 179 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 ABL1P00519 1130 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 SPECC1Q5M775 1068 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 SRGAP1Q7Z6B7 1085 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 BRF1Q92994 677 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 CCDC97Q96F63 343 aaPredicted RBP13.28□□□□□ -0.28
PBX1-211ENST00000498497 NBPF3Q9H094 633 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 CAPN15O75808 1086 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 RWDD2BP57060 319 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 PTH1RQ03431 593 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 OSBPL5Q9H0X9 879 aaPredicted RBP13.28□□□□□ -0.28
PBX1-211ENST00000498497 CYP46A1Q9Y6A2 500 aa13.28□□□□□ -0.28
PBX1-211ENST00000498497 SOWAHDA6NJG2 315 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 ERCC3P19447 782 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 MATR3P43243 847 aaKnown RBP eCLIP13.27□□□□□ -0.28
PBX1-211ENST00000498497 ANAPC15P60006 121 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 STIM1Q13586 685 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 KIAA0825Q8IV33 1275 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 MPHOSPH8Q99549 860 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 SLC40A1Q9NP59 571 aa13.27□□□□□ -0.28
PBX1-211ENST00000498497 SNCBQ16143 134 aa13.27□□□□□ -0.29
PBX1-211ENST00000498497 MSH6P52701 1360 aa13.27□□□□□ -0.29
PBX1-211ENST00000498497 ARHGEF12Q9NZN5 1544 aa13.27□□□□□ -0.29
PBX1-211ENST00000498497 CTAGE5O15320 804 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 BUB1BO60566 1050 aaPredicted RBP13.26□□□□□ -0.29
PBX1-211ENST00000498497 ALDH1L2Q3SY69 923 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 NOC3LQ8WTT2 800 aaKnown RBP13.26□□□□□ -0.29
PBX1-211ENST00000498497 API5Q9BZZ5 524 aaKnown RBP13.26□□□□□ -0.29
PBX1-211ENST00000498497 L3MBTL1Q9Y468 752 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 CDHR2Q9BYE9 1310 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 SRGAP2O75044 1071 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 PYGBP11216 843 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 CCDC13Q8IYE1 715 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 TTC14Q96N46 770 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 TSPYL2Q9H2G4 693 aaPredicted RBP13.26□□□□□ -0.29
PBX1-211ENST00000498497 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 CTAGE15A4D2H0 777 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 KIF3BO15066 747 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 CTAGE8P0CG41 777 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 APBA1Q02410 837 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 GRIK3Q13003 919 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 TBC1D25Q3MII6 688 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 CTAGE6Q86UF2 777 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 CTAGE4Q8IX94 777 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 STAMBPL1Q96FJ0 436 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 USP28Q96RU2 1077 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 TAF6LQ9Y6J9 622 aa13.26□□□□□ -0.29
PBX1-211ENST00000498497 PRG4Q92954 1404 aaPredicted RBP13.26□□□□□ -0.29
PBX1-211ENST00000498497 TTC21AQ8NDW8 1320 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 KANK1Q14678 1352 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 TPD52L2O43399 206 aaKnown RBP13.25□□□□□ -0.29
PBX1-211ENST00000498497 MYL6BP14649 208 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 GUCY1A3Q02108 690 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 CAPRIN2Q6IMN6 1127 aaKnown RBP13.25□□□□□ -0.29
PBX1-211ENST00000498497 RMI1Q9H9A7 625 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 TTC21BQ7Z4L5 1316 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 PNMA6EA0A0J9YXQ4 647 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 GOLGA6L7A0A1B0GV03 622 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 RTN2O75298 545 aa13.25□□□□□ -0.29
PBX1-211ENST00000498497 PNMA8AQ86V59 439 aaPredicted RBP13.25□□□□□ -0.29
PBX1-211ENST00000498497 MYLK4Q86YV6 388 aaPredicted RBP13.25□□□□□ -0.29
PBX1-211ENST00000498497 NSMCE1Q8WV22 266 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms