RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 IKBKEQ14164 716 aa8.4□□□□□ -1.06
SSR3-209ENST00000498205 PLA2G4EQ3MJ16 856 aa8.4□□□□□ -1.06
SSR3-209ENST00000498205 DNAJC14Q6Y2X3 702 aaPredicted RBP8.4□□□□□ -1.06
SSR3-209ENST00000498205 CLEC4MQ9H2X3 399 aaPredicted RBP8.4□□□□□ -1.06
SSR3-209ENST00000498205 DEAF1O75398 565 aaPredicted RBP8.39□□□□□ -1.07
SSR3-209ENST00000498205 LDHBP07195 334 aaKnown RBP8.39□□□□□ -1.07
SSR3-209ENST00000498205 P4HBP07237 508 aaKnown RBP8.39□□□□□ -1.07
SSR3-209ENST00000498205 CD68P34810 354 aaPredicted RBP8.39□□□□□ -1.07
SSR3-209ENST00000498205 SUZ12Q15022 739 aaKnown RBP8.39□□□□□ -1.07
SSR3-209ENST00000498205 GRIK4Q16099 956 aa8.39□□□□□ -1.07
SSR3-209ENST00000498205 RPS26P11Q5JNZ5 115 aaPredicted RBP8.39□□□□□ -1.07
SSR3-209ENST00000498205 HHIPQ96QV1 700 aa8.39□□□□□ -1.07
SSR3-209ENST00000498205 BCL11AQ9H165 835 aa8.39□□□□□ -1.07
SSR3-209ENST00000498205 SH2B1Q9NRF2 756 aaPredicted RBP8.39□□□□□ -1.07
SSR3-209ENST00000498205 PRPF40AO75400 957 aaKnown RBP8.38□□□□□ -1.07
SSR3-209ENST00000498205 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
SSR3-209ENST00000498205 VN1R5Q7Z5H4 357 aa8.38□□□□□ -1.07
SSR3-209ENST00000498205 TMEM130Q8N3G9 435 aa8.38□□□□□ -1.07
SSR3-209ENST00000498205 EPS8L3Q8TE67 593 aaKnown RBP8.38□□□□□ -1.07
SSR3-209ENST00000498205 USP21Q9UK80 565 aa8.38□□□□□ -1.07
SSR3-209ENST00000498205 TMEM238LA0A1B0GVL6 79 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 C1QTNF9BB2RNN3 333 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 SELPP16109 830 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 GRIA4P48058 902 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 GRM2Q14416 872 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.37□□□□□ -1.07
SSR3-209ENST00000498205 CD163Q86VB7 1156 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 NPAS4Q8IUM7 802 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 BCO2Q9BYV7 579 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
SSR3-209ENST00000498205 MSTNO14793 375 aa8.36□□□□□ -1.07
SSR3-209ENST00000498205 ESRRAP11474 423 aaPredicted RBP8.36□□□□□ -1.07
SSR3-209ENST00000498205 GATA4P43694 442 aa8.36□□□□□ -1.07
SSR3-209ENST00000498205 HP1BP3Q5SSJ5 553 aaPredicted RBP8.36□□□□□ -1.07
SSR3-209ENST00000498205 ADAMTSL4Q6UY14 1074 aa8.36□□□□□ -1.07
SSR3-209ENST00000498205 DTHD1Q6ZMT9 781 aa8.36□□□□□ -1.07
SSR3-209ENST00000498205 GSTT1P30711 240 aa8.35□□□□□ -1.07
SSR3-209ENST00000498205 CHRNA4P43681 627 aa8.35□□□□□ -1.07
SSR3-209ENST00000498205 HNRNPUQ00839 825 aaKnown RBP eCLIP8.35□□□□□ -1.07
SSR3-209ENST00000498205 PCDH1Q08174 1060 aa8.35□□□□□ -1.07
SSR3-209ENST00000498205 TXNDC11Q6PKC3 985 aa8.35□□□□□ -1.07
SSR3-209ENST00000498205 TXNRD3Q86VQ6 643 aa8.35□□□□□ -1.07
SSR3-209ENST00000498205 GLIS3Q8NEA6 775 aa8.35□□□□□ -1.07
SSR3-209ENST00000498205 ZNF576Q9H609 170 aa8.35□□□□□ -1.07
SSR3-209ENST00000498205 SOX1O00570 391 aaPredicted RBP8.34□□□□□ -1.07
SSR3-209ENST00000498205 CDC25BP30305 580 aa8.34□□□□□ -1.07
SSR3-209ENST00000498205 GNA15P30679 374 aa8.34□□□□□ -1.07
SSR3-209ENST00000498205 MBTPS1Q14703 1052 aa8.34□□□□□ -1.07
SSR3-209ENST00000498205 GALNT11Q8NCW6 608 aa8.34□□□□□ -1.07
SSR3-209ENST00000498205 SLC7A3Q8WY07 619 aa8.34□□□□□ -1.07
SSR3-209ENST00000498205 FAM8A1Q9UBU6 413 aa8.34□□□□□ -1.07
SSR3-209ENST00000498205 PPM1HQ9ULR3 514 aa8.34□□□□□ -1.07
SSR3-209ENST00000498205 METTL12A8MUP2 240 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 B3GALT4O96024 378 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 CYP11A1P05108 521 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 DUOXA2Q1HG44 320 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 SPRED3Q2MJR0 410 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 SHISA2Q6UWI4 295 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 ANKRD24Q8TF21 1146 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 KLHDC7BQ96G42 594 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 C12orf49Q9H741 205 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 AKTIPQ9H8T0 292 aa8.33□□□□□ -1.08
SSR3-209ENST00000498205 FCGRTP55899 365 aa8.32□□□□□ -1.08
SSR3-209ENST00000498205 PPP2R3AQ06190 1150 aa8.32□□□□□ -1.08
SSR3-209ENST00000498205 FOXD4L6Q3SYB3 417 aaPredicted RBP8.32□□□□□ -1.08
SSR3-209ENST00000498205 GPAT2Q6NUI2 795 aa8.32□□□□□ -1.08
SSR3-209ENST00000498205 NXPE4Q6UWF7 544 aa8.32□□□□□ -1.08
SSR3-209ENST00000498205 FOXD4L3Q6VB84 417 aaPredicted RBP8.32□□□□□ -1.08
SSR3-209ENST00000498205 CARD10Q9BWT7 1032 aa8.32□□□□□ -1.08
SSR3-209ENST00000498205 TM4SF5O14894 197 aa8.31□□□□□ -1.08
SSR3-209ENST00000498205 AP3B2Q13367 1082 aa8.31□□□□□ -1.08
SSR3-209ENST00000498205 PI16Q6UXB8 463 aa8.31□□□□□ -1.08
SSR3-209ENST00000498205 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.31□□□□□ -1.08
SSR3-209ENST00000498205 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
SSR3-209ENST00000498205 CEP41Q9BYV8 373 aa8.31□□□□□ -1.08
SSR3-209ENST00000498205 WWC3Q9ULE0 1092 aa8.31□□□□□ -1.08
SSR3-209ENST00000498205 F8W735 103 aaPredicted RBP8.3□□□□□ -1.08
SSR3-209ENST00000498205 EIF4BP23588 611 aaKnown RBP8.3□□□□□ -1.08
SSR3-209ENST00000498205 XPCQ01831 940 aaPredicted RBP8.3□□□□□ -1.08
SSR3-209ENST00000498205 GSTM4Q03013 218 aa8.3□□□□□ -1.08
SSR3-209ENST00000498205 ZNF326Q5BKZ1 582 aaKnown RBP8.3□□□□□ -1.08
SSR3-209ENST00000498205 FBXO33Q7Z6M2 555 aa8.3□□□□□ -1.08
SSR3-209ENST00000498205 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
SSR3-209ENST00000498205 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
SSR3-209ENST00000498205 RNF208Q9H0X6 261 aa8.3□□□□□ -1.08
SSR3-209ENST00000498205 AK5Q9Y6K8 562 aa8.3□□□□□ -1.08
SSR3-209ENST00000498205 MEGF11A6BM72 1044 aa8.29□□□□□ -1.08
SSR3-209ENST00000498205 PROCP04070 461 aa8.29□□□□□ -1.08
SSR3-209ENST00000498205 ITGB2P05107 769 aa8.29□□□□□ -1.08
SSR3-209ENST00000498205 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
SSR3-209ENST00000498205 ZNF423Q2M1K9 1284 aa8.29□□□□□ -1.08
SSR3-209ENST00000498205 UVSSAQ2YD98 709 aa8.29□□□□□ -1.08
SSR3-209ENST00000498205 ACAD11Q709F0 780 aa8.29□□□□□ -1.08
SSR3-209ENST00000498205 NLRP12P59046 1061 aa8.28□□□□□ -1.08
SSR3-209ENST00000498205 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
SSR3-209ENST00000498205 ANKRD34AQ69YU3 496 aa8.28□□□□□ -1.08
SSR3-209ENST00000498205 Q6ZS46 218 aa8.28□□□□□ -1.08
SSR3-209ENST00000498205 FOXD4L4Q8WXT5 416 aaPredicted RBP8.28□□□□□ -1.08
SSR3-209ENST00000498205 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 604.4 ms