RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ZSWIM6Q9HCJ5 1215 aa21.28■■□□□ 1
CHRNA4-206ENST00000498043 ANKIB1Q9P2G1 1089 aa21.28■■□□□ 1
CHRNA4-206ENST00000498043 CYP46A1Q9Y6A2 500 aa21.28■■□□□ 1
CHRNA4-206ENST00000498043 GPAA1O43292 621 aa21.27■■□□□ 1
CHRNA4-206ENST00000498043 CYP21A2P08686 494 aa21.27■■□□□ 1
CHRNA4-206ENST00000498043 AK2P54819 239 aa21.27■■□□□ 1
CHRNA4-206ENST00000498043 COL9A3Q14050 684 aaPredicted RBP21.27■■□□□ 1
CHRNA4-206ENST00000498043 MAP3K12Q12852 859 aa21.27■□□□□ 0.99
CHRNA4-206ENST00000498043 UBE3CQ15386 1083 aa21.27■□□□□ 0.99
CHRNA4-206ENST00000498043 RUFY3Q7L099 469 aa21.27■□□□□ 0.99
CHRNA4-206ENST00000498043 MAGEB6Q8N7X4 407 aa21.27■□□□□ 0.99
CHRNA4-206ENST00000498043 COL11A2P13942 1736 aaPredicted RBP21.26■□□□□ 0.99
CHRNA4-206ENST00000498043 TCRBV5S4A2TA0A5A2 114 aa21.26■□□□□ 0.99
CHRNA4-206ENST00000498043 FOXP2O15409 715 aa21.26■□□□□ 0.99
CHRNA4-206ENST00000498043 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 PSMA5P28066 241 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 SLC15A2Q16348 729 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 ZGPATQ8N5A5 531 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 LARP6Q9BRS8 491 aaKnown RBP21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 PDRG1Q9NUG6 133 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 NFKBIBQ15653 356 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 TSGA10IPQ3SY00 556 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 IL27Q8NEV9 243 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 PARP3Q9Y6F1 533 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 LAMA4Q16363 1823 aa21.25■□□□□ 0.99
CHRNA4-206ENST00000498043 XDHP47989 1333 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 A0A0G2JLW4 131 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 BLOC1S2Q6QNY1 142 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 FBXO33Q7Z6M2 555 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 TXNRD3Q86VQ6 643 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 STK32BQ9NY57 414 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 LRP2BPQ9P2M1 347 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 LRRC37AA6NMS7 1700 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 KLRG2A4D1S0 409 aaPredicted RBP21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 FRAT2O75474 233 aaPredicted RBP21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 KRT32Q14532 448 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 ABCF2Q9UG63 623 aa21.24■□□□□ 0.99
CHRNA4-206ENST00000498043 HOXA10P31260 410 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 HIBADHP31937 336 aaKnown RBP21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 SF3B2Q13435 895 aaKnown RBP21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 TTLL5Q6EMB2 1281 aa21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 TCEANC2Q96MN5 208 aa21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 DENND2AQ9ULE3 1009 aa21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 CIZ1Q9ULV3 898 aaPredicted RBP21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 IRS2Q9Y4H2 1338 aa21.23■□□□□ 0.99
CHRNA4-206ENST00000498043 GPSM2P81274 684 aa21.22■□□□□ 0.99
CHRNA4-206ENST00000498043 DEFB132Q7Z7B7 95 aa21.22■□□□□ 0.99
CHRNA4-206ENST00000498043 RPS6KB1P23443 525 aa21.22■□□□□ 0.99
CHRNA4-206ENST00000498043 STOX1Q6ZVD7 989 aa21.22■□□□□ 0.99
CHRNA4-206ENST00000498043 AIDAQ96BJ3 306 aa21.22■□□□□ 0.99
CHRNA4-206ENST00000498043 GPR101Q96P66 508 aaPredicted RBP21.22■□□□□ 0.99
CHRNA4-206ENST00000498043 BAG6P46379 1132 aa21.21■□□□□ 0.99
CHRNA4-206ENST00000498043 CUL4AQ13619 759 aa21.21■□□□□ 0.99
CHRNA4-206ENST00000498043 CRAMP1Q96RY5 1269 aa21.21■□□□□ 0.99
CHRNA4-206ENST00000498043 NSFL1CQ9UNZ2 370 aaKnown RBP21.21■□□□□ 0.99
CHRNA4-206ENST00000498043 LEMD3Q9Y2U8 911 aa21.21■□□□□ 0.99
CHRNA4-206ENST00000498043 CACNA1SQ13698 1873 aa21.21■□□□□ 0.99
CHRNA4-206ENST00000498043 SEMA3EO15041 775 aa21.2■□□□□ 0.99
CHRNA4-206ENST00000498043 NEK1Q96PY6 1258 aa21.2■□□□□ 0.99
CHRNA4-206ENST00000498043 RAI14Q9P0K7 980 aa21.2■□□□□ 0.99
CHRNA4-206ENST00000498043 LIMCH1Q9UPQ0 1083 aa21.2■□□□□ 0.99
CHRNA4-206ENST00000498043 LTBP1Q14766 1721 aa21.2■□□□□ 0.98
CHRNA4-206ENST00000498043 BBOX1O75936 387 aa21.2■□□□□ 0.98
CHRNA4-206ENST00000498043 UFL1O94874 794 aa21.2■□□□□ 0.98
CHRNA4-206ENST00000498043 MBD4O95243 580 aa21.2■□□□□ 0.98
CHRNA4-206ENST00000498043 PPEF1O14829 653 aaPredicted RBP21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 LARGE1O95461 756 aa21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 FGAP02671 866 aa21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 HAND2P61296 217 aa21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 CHAF1AQ13111 956 aaPredicted RBP21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 CTNNA3Q9UI47 895 aa21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 MAST2Q6P0Q8 1798 aa21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 SRGNP10124 158 aa21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
CHRNA4-206ENST00000498043 MIGA1Q8NAN2 632 aa21.18■□□□□ 0.98
CHRNA4-206ENST00000498043 STRBPQ96SI9 672 aaKnown RBP21.18■□□□□ 0.98
CHRNA4-206ENST00000498043 ARMT1Q9H993 441 aa21.18■□□□□ 0.98
CHRNA4-206ENST00000498043 E7EWF7 191 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 APPP05067 770 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 PDE6BP35913 854 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 IMMTQ16891 758 aaKnown RBP21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 ADGRA1Q86SQ6 560 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 CWC22Q9HCG8 908 aaKnown RBP21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 GGA1Q9UJY5 639 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 PDS5AQ29RF7 1337 aaKnown RBP21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 NPR1P16066 1061 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 CYP7A1P22680 504 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 RAB3GAP1Q15042 981 aa21.17■□□□□ 0.98
CHRNA4-206ENST00000498043 LCORLQ8N3X6 602 aa21.16■□□□□ 0.98
CHRNA4-206ENST00000498043 INTS4Q96HW7 963 aaKnown RBP21.16■□□□□ 0.98
CHRNA4-206ENST00000498043 TOB2Q14106 344 aaPredicted RBP21.16■□□□□ 0.98
CHRNA4-206ENST00000498043 ZNF804AQ7Z570 1209 aa21.16■□□□□ 0.98
CHRNA4-206ENST00000498043 TPCN1Q9ULQ1 816 aa21.16■□□□□ 0.98
CHRNA4-206ENST00000498043 ATP2B4P23634 1241 aa21.15■□□□□ 0.98
CHRNA4-206ENST00000498043 PDGFDQ9GZP0 370 aaPredicted RBP21.15■□□□□ 0.98
CHRNA4-206ENST00000498043 CCDC88AQ3V6T2 1871 aa21.15■□□□□ 0.98
CHRNA4-206ENST00000498043 PKP1Q13835 747 aa21.14■□□□□ 0.98
CHRNA4-206ENST00000498043 TMC4Q7Z404 712 aa21.14■□□□□ 0.98
CHRNA4-206ENST00000498043 TNPO1Q92973 898 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms