RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 ZNF787Q6DD87 383 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 GIMAP6Q6P9H5 292 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 NLRP13Q86W25 1043 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 SLC4A9Q96Q91 983 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 RAB6BQ9NRW1 208 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 TMA7Q9Y2S6 64 aaKnown RBP7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 SPATA31A5Q5VU36 1347 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 TTC21BQ7Z4L5 1316 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 SPATA31A7Q8IWB4 1347 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 KTN1Q86UP2 1357 aaKnown RBP7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 DISP2A7MBM2 1401 aa7.95□□□□□ -1.14
TMEM39A-212ENST00000497993 KAT6BQ8WYB5 2073 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 ST20-MTHFSA0A0A6YYL1 179 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 MAN1A2O60476 641 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 MAPK1P28482 360 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 CENPCQ03188 943 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 PTK7Q13308 1070 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 RNF217Q8TC41 542 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 ASB16Q96NS5 453 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 GRIP2Q9C0E4 1043 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 BCL9O00512 1426 aa7.94□□□□□ -1.14
TMEM39A-212ENST00000497993 POTECB2RU33 542 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 M0R2N6 131 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 GCP02774 474 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 ANKMY2Q8IV38 441 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 ABTB2Q8N961 1025 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 CUEDC1Q9NWM3 386 aaPredicted RBP7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 KIAA1024Q9UPX6 916 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 CRB1P82279 1406 aa7.93□□□□□ -1.14
TMEM39A-212ENST00000497993 H3BRB1 525 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 DKK1O94907 266 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 ABL1P00519 1130 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 SNRPBP14678 240 aaKnown RBP7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 GTF2E1P29083 439 aaPredicted RBP7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 SMTNP53814 917 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 SLC27A3Q5K4L6 730 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 LYSMD3Q7Z3D4 306 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 GLYCTKQ8IVS8 523 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 KCNH5Q8NCM2 988 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 ZNF594Q96JF6 807 aaPredicted RBP7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 FHDC1Q9C0D6 1143 aaPredicted RBP7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 TUT1Q9H6E5 874 aaKnown RBP7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 PRDM11Q9NQV5 511 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 ZNF358Q9NW07 568 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 DCTN4Q9UJW0 460 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 DNMT3LQ9UJW3 386 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 SPATA31A1Q5TZJ5 1347 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 KIF24Q5T7B8 1368 aa7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 BLMP54132 1417 aaPredicted RBP7.92□□□□□ -1.14
TMEM39A-212ENST00000497993 STAU1O95793 577 aaKnown RBP7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 SEC13P55735 322 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 TMF1P82094 1093 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 MTFR1Q15390 333 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 TLR1Q15399 786 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 EAPPQ56P03 285 aaPredicted RBP7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 WDR44Q5JSH3 913 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 NOL8Q76FK4 1167 aaKnown RBP7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 ARHGEF25Q86VW2 580 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 PIK3R5Q8WYR1 880 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 ZSCAN10Q96SZ4 725 aaPredicted RBP7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 TANGO6Q9C0B7 1094 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 BTG4Q9NY30 223 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 TERF2IPQ9NYB0 399 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 THRAP3Q9Y2W1 955 aaKnown RBP7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 RTL1A6NKG5 1358 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 NCAPD2Q15021 1401 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 PKD1L3Q7Z443 1732 aa7.91□□□□□ -1.14
TMEM39A-212ENST00000497993 NUP188Q5SRE5 1749 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 NHSQ6T4R5 1651 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 A6NJY4 79 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 FIGNL2A6NMB9 653 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 SPATA31C2B4DYI2 1134 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 ICMTO60725 284 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 TAGLNQ01995 201 aaKnown RBP7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 DPYDQ12882 1025 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 BACH2Q9BYV9 841 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 SERTAD1Q9UHV2 236 aa7.9□□□□□ -1.14
TMEM39A-212ENST00000497993 VIRMAQ69YN4 1812 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 PLEKHG2Q9H7P9 1386 aa7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 WDR17Q8IZU2 1322 aa7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 CDK2AP1O14519 115 aa7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 HDLBPQ00341 1268 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 TMEM214Q6NUQ4 689 aaKnown RBP7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 HDGFL2Q7Z4V5 671 aaPredicted RBP7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 SLC12A5Q9H2X9 1139 aa7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 QSER1Q2KHR3 1735 aa7.89□□□□□ -1.15
TMEM39A-212ENST00000497993 SMG6Q86US8 1419 aaKnown RBP7.88□□□□□ -1.15
TMEM39A-212ENST00000497993 CCDC7Q96M83 1385 aa7.88□□□□□ -1.15
TMEM39A-212ENST00000497993 GNASQ5JWF2 1037 aa7.88□□□□□ -1.15
TMEM39A-212ENST00000497993 PRICKLE2Q7Z3G6 844 aa7.88□□□□□ -1.15
TMEM39A-212ENST00000497993 CERS3Q8IU89 383 aa7.88□□□□□ -1.15
TMEM39A-212ENST00000497993 NBPF15Q8N660 670 aa7.88□□□□□ -1.15
TMEM39A-212ENST00000497993 TNS2Q63HR2 1409 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 SOBPA7XYQ1 873 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 SFI1A8K8P3 1242 aa7.87□□□□□ -1.15
TMEM39A-212ENST00000497993 C21orf2O43822 256 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms