RNA–Protein interactions for RNA: ENST00000497850.5

NXF3-207, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 2,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-207ENST00000497850 GPR108Q9NPR9 543 aa15.15■□□□□ 0.02
NXF3-207ENST00000497850 CTDNEP1O95476 244 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 TNNT1P13805 278 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 HLFQ16534 295 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 RAB11FIP4Q86YS3 637 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 DSCC1Q9BVC3 393 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 PAXBP1Q9Y5B6 917 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 TNS2Q63HR2 1409 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 PTPDC1A2A3K4 754 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 NR1I2O75469 434 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 FAM193AP78312 1265 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 LRMPQ12912 555 aa15.14■□□□□ 0.01
NXF3-207ENST00000497850 NSUN7Q8NE18 718 aaKnown RBP15.14■□□□□ 0.01
NXF3-207ENST00000497850 CCDC192P0DO97 292 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 ZAP70P43403 619 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 MAP3K11Q16584 847 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 KIF6Q6ZMV9 814 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 SCAND2PQ9GZW5 306 aaPredicted RBP15.13■□□□□ 0.01
NXF3-207ENST00000497850 TNMDQ9H2S6 317 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 ELP1O95163 1332 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 PFKFB2O60825 505 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 CIAO1O76071 339 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 CCDC158Q5M9N0 1113 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 SYTL4Q96C24 671 aaPredicted RBP15.13■□□□□ 0.01
NXF3-207ENST00000497850 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 MRVI1Q9Y6F6 885 aa15.13■□□□□ 0.01
NXF3-207ENST00000497850 EXOSC10Q01780 885 aaKnown RBP15.12■□□□□ 0.01
NXF3-207ENST00000497850 TYRO3Q06418 890 aa15.12■□□□□ 0.01
NXF3-207ENST00000497850 LUZP1Q86V48 1076 aa15.12■□□□□ 0.01
NXF3-207ENST00000497850 ST7Q9NRC1 585 aa15.12■□□□□ 0.01
NXF3-207ENST00000497850 ATG3Q9NT62 314 aa15.12■□□□□ 0.01
NXF3-207ENST00000497850 BTG4Q9NY30 223 aa15.12■□□□□ 0.01
NXF3-207ENST00000497850 IFIT5Q13325 482 aaKnown RBP15.12■□□□□ 0.01
NXF3-207ENST00000497850 CCDC186Q7Z3E2 898 aa15.12■□□□□ 0.01
NXF3-207ENST00000497850 SMARCC2Q8TAQ2 1214 aa15.12■□□□□ 0.01
NXF3-207ENST00000497850 NWD2Q9ULI1 1742 aa15.11■□□□□ 0.01
NXF3-207ENST00000497850 FOXP2O15409 715 aa15.11■□□□□ 0.01
NXF3-207ENST00000497850 RBM6P78332 1123 aaKnown RBP15.11■□□□□ 0.01
NXF3-207ENST00000497850 PUS7LQ9H0K6 701 aaKnown RBP15.11■□□□□ 0.01
NXF3-207ENST00000497850 GREM2Q9H772 168 aa15.11■□□□□ 0.01
NXF3-207ENST00000497850 A0A0G2JS52 829 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
NXF3-207ENST00000497850 ANO6Q4KMQ2 910 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 TRIM34Q9BYJ4 488 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.1■□□□□ 0.01
NXF3-207ENST00000497850 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
NXF3-207ENST00000497850 PDIA3P30101 505 aaKnown RBP15.1■□□□□ 0.01
NXF3-207ENST00000497850 METTL24Q5JXM2 366 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 OTUD7BQ6GQQ9 843 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 ZSCAN25Q6NSZ9 544 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 FBXO38Q6PIJ6 1188 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 FAM200AQ8TCP9 573 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 TSPYL1Q9H0U9 437 aa15.1■□□□□ 0.01
NXF3-207ENST00000497850 ITGB4P16144 1822 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 MYH15Q9Y2K3 1946 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 ITGA6P23229 1130 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 CYP2C19P33261 490 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 ZBTB38Q8NAP3 1195 aaPredicted RBP15.09■□□□□ 0.01
NXF3-207ENST00000497850 SLC4A9Q96Q91 983 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 MYO5AQ9Y4I1 1855 aaKnown RBP15.09■□□□□ 0.01
NXF3-207ENST00000497850 A0A087WWV3 80 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 LDHAL6AQ6ZMR3 332 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 PAXIP1Q6ZW49 1069 aaPredicted RBP15.09■□□□□ 0.01
NXF3-207ENST00000497850 CLSTN2Q9H4D0 955 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 NRBP1Q9UHY1 535 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 ZNF215Q9UL58 517 aaPredicted RBP15.09■□□□□ 0.01
NXF3-207ENST00000497850 DENND2AQ9ULE3 1009 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 AKAP2Q9Y2D5 859 aa15.09■□□□□ 0.01
NXF3-207ENST00000497850 STRCQ7RTU9 1775 aa15.08■□□□□ 0.01
NXF3-207ENST00000497850 STARD3NLO95772 234 aa15.08■□□□□ 0
NXF3-207ENST00000497850 FGAP02671 866 aa15.08■□□□□ 0
NXF3-207ENST00000497850 ADD1P35611 737 aaKnown RBP15.08■□□□□ 0
NXF3-207ENST00000497850 CBX8Q9HC52 389 aa15.08■□□□□ 0
NXF3-207ENST00000497850 FEZ2Q9UHY8 353 aaPredicted RBP15.08■□□□□ 0
NXF3-207ENST00000497850 TBC1D2BQ9UPU7 963 aa15.08■□□□□ 0
NXF3-207ENST00000497850 MAP3K15Q6ZN16 1313 aa15.08■□□□□ 0
NXF3-207ENST00000497850 RIC1Q4ADV7 1423 aa15.08■□□□□ 0
NXF3-207ENST00000497850 MCAMP43121 646 aa15.08■□□□□ 0
NXF3-207ENST00000497850 CEP135Q66GS9 1140 aa15.08■□□□□ 0
NXF3-207ENST00000497850 NLRP10Q86W26 655 aa15.08■□□□□ 0
NXF3-207ENST00000497850 HELBQ8NG08 1087 aaPredicted RBP15.08■□□□□ 0
NXF3-207ENST00000497850 USP28Q96RU2 1077 aa15.08■□□□□ 0
NXF3-207ENST00000497850 DNAJC25Q9H1X3 360 aa15.08■□□□□ 0
NXF3-207ENST00000497850 CNNM1Q9NRU3 951 aa15.08■□□□□ 0
NXF3-207ENST00000497850 ZNF446Q9NWS9 450 aa15.08■□□□□ 0
NXF3-207ENST00000497850 ZBTB1Q9Y2K1 713 aa15.08■□□□□ 0
NXF3-207ENST00000497850 CSF1RP07333 972 aa15.07■□□□□ 0
NXF3-207ENST00000497850 GIGYF2Q6Y7W6 1299 aaKnown RBP15.07■□□□□ 0
NXF3-207ENST00000497850 TTLL11Q8NHH1 800 aa15.07■□□□□ 0
NXF3-207ENST00000497850 NKX2-3Q8TAU0 364 aa15.07■□□□□ 0
NXF3-207ENST00000497850 LLPHQ9BRT6 129 aaKnown RBP15.07■□□□□ 0
NXF3-207ENST00000497850 AGXT2Q9BYV1 514 aa15.07■□□□□ 0
NXF3-207ENST00000497850 ZSCAN16Q9H4T2 348 aaPredicted RBP15.07■□□□□ 0
NXF3-207ENST00000497850 GJB4Q9NTQ9 266 aa15.07■□□□□ 0
NXF3-207ENST00000497850 DDX19AQ9NUU7 478 aaKnown RBP15.07■□□□□ 0
NXF3-207ENST00000497850 TPD52L1Q16890 204 aaPredicted RBP15.06■□□□□ 0
NXF3-207ENST00000497850 PLA2G4DQ86XP0 818 aa15.06■□□□□ 0
NXF3-207ENST00000497850 GOLPH3LQ9H4A5 285 aa15.06■□□□□ 0
NXF3-207ENST00000497850 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms