RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 ANKRD13AQ8IZ07 590 aa18.89■□□□□ 0.61
RNF220-218ENST00000497469 MYLIPQ8WY64 445 aa18.89■□□□□ 0.61
RNF220-218ENST00000497469 DEFB118Q96PH6 123 aa18.89■□□□□ 0.61
RNF220-218ENST00000497469 FMNL1O95466 1100 aaPredicted RBP18.88■□□□□ 0.61
RNF220-218ENST00000497469 TJAP1Q5JTD0 557 aa18.88■□□□□ 0.61
RNF220-218ENST00000497469 COL3A1P02461 1466 aaPredicted RBP18.87■□□□□ 0.61
RNF220-218ENST00000497469 RPS8P62241 208 aaKnown RBP18.87■□□□□ 0.61
RNF220-218ENST00000497469 PRKCZQ05513 592 aa18.87■□□□□ 0.61
RNF220-218ENST00000497469 KIAA0825Q8IV33 1275 aa18.87■□□□□ 0.61
RNF220-218ENST00000497469 CPA4Q9UI42 421 aa18.87■□□□□ 0.61
RNF220-218ENST00000497469 UNCXA6NJT0 531 aa18.86■□□□□ 0.61
RNF220-218ENST00000497469 GTF2A2P52657 109 aa18.86■□□□□ 0.61
RNF220-218ENST00000497469 PROSER3Q2NL68 480 aa18.86■□□□□ 0.61
RNF220-218ENST00000497469 RTL5Q5HYW3 569 aaPredicted RBP18.86■□□□□ 0.61
RNF220-218ENST00000497469 LRP10Q7Z4F1 713 aa18.86■□□□□ 0.61
RNF220-218ENST00000497469 PODNQ7Z5L7 613 aa18.86■□□□□ 0.61
RNF220-218ENST00000497469 NECAB2Q7Z6G3 386 aa18.86■□□□□ 0.61
RNF220-218ENST00000497469 ZBED3Q96IU2 234 aaPredicted RBP18.86■□□□□ 0.61
RNF220-218ENST00000497469 PCDHAC2Q9Y5I4 1007 aa18.86■□□□□ 0.61
RNF220-218ENST00000497469 CLRN2A0PK11 232 aa18.85■□□□□ 0.61
RNF220-218ENST00000497469 SF3B3Q15393 1217 aaKnown RBP18.85■□□□□ 0.61
RNF220-218ENST00000497469 TAF7Q15545 349 aaPredicted RBP18.85■□□□□ 0.61
RNF220-218ENST00000497469 FAM89AQ96GI7 184 aa18.85■□□□□ 0.61
RNF220-218ENST00000497469 SEC31BQ9NQW1 1179 aa18.85■□□□□ 0.61
RNF220-218ENST00000497469 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
RNF220-218ENST00000497469 SYNGAP1Q96PV0 1343 aa18.84■□□□□ 0.61
RNF220-218ENST00000497469 WDHD1O75717 1129 aaPredicted RBP18.84■□□□□ 0.61
RNF220-218ENST00000497469 SUPT20HL1Q3ZLR7 823 aa18.84■□□□□ 0.61
RNF220-218ENST00000497469 CDH23Q9H251 3354 aa18.83■□□□□ 0.61
RNF220-218ENST00000497469 BTBD19C9JJ37 291 aa18.83■□□□□ 0.6
RNF220-218ENST00000497469 ELNP15502 786 aa18.83■□□□□ 0.6
RNF220-218ENST00000497469 HOXD10P28358 340 aa18.83■□□□□ 0.6
RNF220-218ENST00000497469 MDM2Q00987 491 aaPredicted RBP18.83■□□□□ 0.6
RNF220-218ENST00000497469 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
RNF220-218ENST00000497469 COL2A1P02458 1487 aaPredicted RBP18.83■□□□□ 0.6
RNF220-218ENST00000497469 INHAP05111 366 aa18.82■□□□□ 0.6
RNF220-218ENST00000497469 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
RNF220-218ENST00000497469 HSP90AB3PQ58FF7 597 aa18.82■□□□□ 0.6
RNF220-218ENST00000497469 VEZTQ9HBM0 779 aa18.82■□□□□ 0.6
RNF220-218ENST00000497469 GABRQQ9UN88 632 aa18.82■□□□□ 0.6
RNF220-218ENST00000497469 AOX1Q06278 1338 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 MYO3BQ8WXR4 1341 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 FOSL2P15408 326 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 PDIA6Q15084 440 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 C17orf99Q6UX52 265 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.81■□□□□ 0.6
RNF220-218ENST00000497469 USP38Q8NB14 1042 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 SLAIN1Q8ND83 568 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 PPP2R3BQ9Y5P8 575 aa18.81■□□□□ 0.6
RNF220-218ENST00000497469 ZNF804BA4D1E1 1349 aa18.8■□□□□ 0.6
RNF220-218ENST00000497469 VGLL4Q14135 290 aa18.8■□□□□ 0.6
RNF220-218ENST00000497469 AMER1Q5JTC6 1135 aaPredicted RBP18.8■□□□□ 0.6
RNF220-218ENST00000497469 EIF2S2P20042 333 aaKnown RBP18.79■□□□□ 0.6
RNF220-218ENST00000497469 DLGAP5Q15398 846 aa18.79■□□□□ 0.6
RNF220-218ENST00000497469 STRIP1Q5VSL9 837 aa18.79■□□□□ 0.6
RNF220-218ENST00000497469 CRISPLD2Q9H0B8 497 aa18.79■□□□□ 0.6
RNF220-218ENST00000497469 SEMA6BQ9H3T3 888 aa18.79■□□□□ 0.6
RNF220-218ENST00000497469 XDHP47989 1333 aa18.78■□□□□ 0.6
RNF220-218ENST00000497469 ADCY3O60266 1144 aa18.78■□□□□ 0.6
RNF220-218ENST00000497469 COPS6Q7L5N1 327 aa18.78■□□□□ 0.6
RNF220-218ENST00000497469 ALYREFQ86V81 257 aaKnown RBP18.78■□□□□ 0.6
RNF220-218ENST00000497469 CDAN1Q8IWY9 1227 aa18.78■□□□□ 0.6
RNF220-218ENST00000497469 FAM205AQ6ZU69 1335 aa18.77■□□□□ 0.6
RNF220-218ENST00000497469 ADGRA2Q96PE1 1338 aa18.77■□□□□ 0.6
RNF220-218ENST00000497469 XAGE3Q8WTP9 111 aa18.77■□□□□ 0.6
RNF220-218ENST00000497469 CCDC85AQ96PX6 553 aaPredicted RBP18.77■□□□□ 0.6
RNF220-218ENST00000497469 PAK6Q9NQU5 681 aaPredicted RBP18.77■□□□□ 0.6
RNF220-218ENST00000497469 RASA3Q14644 834 aa18.76■□□□□ 0.59
RNF220-218ENST00000497469 CETPP11597 493 aa18.75■□□□□ 0.59
RNF220-218ENST00000497469 ATP2B4P23634 1241 aa18.75■□□□□ 0.59
RNF220-218ENST00000497469 TTYH1Q9H313 450 aaPredicted RBP18.75■□□□□ 0.59
RNF220-218ENST00000497469 DDX60LQ5H9U9 1706 aaKnown RBP18.74■□□□□ 0.59
RNF220-218ENST00000497469 MED23Q9ULK4 1368 aa18.74■□□□□ 0.59
RNF220-218ENST00000497469 ATP5J2-PTCD1G3V325 749 aa18.74■□□□□ 0.59
RNF220-218ENST00000497469 IRS4O14654 1257 aaPredicted RBP18.74■□□□□ 0.59
RNF220-218ENST00000497469 TTLL5Q6EMB2 1281 aa18.74■□□□□ 0.59
RNF220-218ENST00000497469 HELBQ8NG08 1087 aaPredicted RBP18.74■□□□□ 0.59
RNF220-218ENST00000497469 C11orf49Q9H6J7 331 aa18.74■□□□□ 0.59
RNF220-218ENST00000497469 TAOK2Q9UL54 1235 aa18.74■□□□□ 0.59
RNF220-218ENST00000497469 F8W031 263 aaPredicted RBP18.73■□□□□ 0.59
RNF220-218ENST00000497469 CNGB1Q14028 1251 aaPredicted RBP18.73■□□□□ 0.59
RNF220-218ENST00000497469 TXNRD3Q86VQ6 643 aa18.73■□□□□ 0.59
RNF220-218ENST00000497469 ADAMTS19Q8TE59 1207 aa18.73■□□□□ 0.59
RNF220-218ENST00000497469 NBPF3Q9H094 633 aa18.73■□□□□ 0.59
RNF220-218ENST00000497469 ZCCHC17Q9NP64 241 aaKnown RBP18.73■□□□□ 0.59
RNF220-218ENST00000497469 HCN4Q9Y3Q4 1203 aa18.73■□□□□ 0.59
RNF220-218ENST00000497469 CSADQ9Y600 493 aa18.73■□□□□ 0.59
RNF220-218ENST00000497469 CACNA1AO00555 2505 aa18.72■□□□□ 0.59
RNF220-218ENST00000497469 ECM29Q5VYK3 1845 aa18.72■□□□□ 0.59
RNF220-218ENST00000497469 FCGRTP55899 365 aa18.72■□□□□ 0.59
RNF220-218ENST00000497469 GTF2IP78347 998 aa18.72■□□□□ 0.59
RNF220-218ENST00000497469 MAP3K9P80192 1104 aa18.72■□□□□ 0.59
RNF220-218ENST00000497469 CC2D1BQ5T0F9 858 aaKnown RBP18.72■□□□□ 0.59
RNF220-218ENST00000497469 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.72■□□□□ 0.595e-6■■□□□ 13.9
RNF220-218ENST00000497469 SPDYE5A6NIY4 337 aa18.71■□□□□ 0.59
RNF220-218ENST00000497469 FLT3LGP49771 235 aa18.71■□□□□ 0.59
RNF220-218ENST00000497469 CFAP100Q494V2 611 aa18.71■□□□□ 0.59
RNF220-218ENST00000497469 PRMT6Q96LA8 375 aaPredicted RBP18.71■□□□□ 0.59
RNF220-218ENST00000497469 IRF6O14896 467 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms