RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
SCNM1-206ENST00000497147 PTCH2Q9Y6C5 1203 aa12.41□□□□□ -0.42
SCNM1-206ENST00000497147 UNC80Q8N2C7 3258 aa12.41□□□□□ -0.42
SCNM1-206ENST00000497147 SSC5DA1L4H1 1573 aa12.4□□□□□ -0.42
SCNM1-206ENST00000497147 MYCP01106 439 aaPredicted RBP12.4□□□□□ -0.42
SCNM1-206ENST00000497147 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.42
SCNM1-206ENST00000497147 MAP3K11Q16584 847 aa12.4□□□□□ -0.42
SCNM1-206ENST00000497147 G2E3Q7L622 706 aa12.4□□□□□ -0.42
SCNM1-206ENST00000497147 OGFOD1Q8N543 542 aa12.4□□□□□ -0.42
SCNM1-206ENST00000497147 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
SCNM1-206ENST00000497147 ZBED3Q96IU2 234 aaPredicted RBP12.4□□□□□ -0.42
SCNM1-206ENST00000497147 PRO3102Q9H379 93 aa12.4□□□□□ -0.42
SCNM1-206ENST00000497147 XDHP47989 1333 aa12.39□□□□□ -0.43
SCNM1-206ENST00000497147 SLC4A8Q2Y0W8 1093 aa12.39□□□□□ -0.43
SCNM1-206ENST00000497147 SLC9C1Q4G0N8 1177 aa12.39□□□□□ -0.43
SCNM1-206ENST00000497147 APOBEC3FQ8IUX4 373 aaKnown RBP12.39□□□□□ -0.43
SCNM1-206ENST00000497147 ZNF646O15015 1829 aaPredicted RBP12.39□□□□□ -0.43
SCNM1-206ENST00000497147 PTPRCP08575 1304 aa12.38□□□□□ -0.43
SCNM1-206ENST00000497147 KIF16BQ96L93 1317 aa12.38□□□□□ -0.43
SCNM1-206ENST00000497147 TRIM28Q13263 835 aaKnown RBP12.38□□□□□ -0.43
SCNM1-206ENST00000497147 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
SCNM1-206ENST00000497147 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
SCNM1-206ENST00000497147 CCDC85AQ96PX6 553 aaPredicted RBP12.38□□□□□ -0.43
SCNM1-206ENST00000497147 DEFB129Q9H1M3 183 aa12.38□□□□□ -0.43
SCNM1-206ENST00000497147 MAP3K2Q9Y2U5 619 aa12.38□□□□□ -0.43
SCNM1-206ENST00000497147 TESPA1A2RU30 521 aaPredicted RBP12.37□□□□□ -0.43
SCNM1-206ENST00000497147 PI4KAP2A4QPH2 592 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 NEXNQ0ZGT2 675 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 STRIP1Q5VSL9 837 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 PI4KAP1Q8N8J0 262 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 SH3TC2Q8TF17 1288 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 FBXW7Q969H0 707 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 SHISA4Q96DD7 197 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 RCAN3Q9UKA8 241 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 LAMB1P07942 1786 aa12.37□□□□□ -0.43
SCNM1-206ENST00000497147 MED23Q9ULK4 1368 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 SOX1O00570 391 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-206ENST00000497147 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
SCNM1-206ENST00000497147 BCAR3O75815 825 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 OTUD7BQ6GQQ9 843 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 TXNRD3Q86VQ6 643 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 ZBTB38Q8NAP3 1195 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-206ENST00000497147 DNAAF4Q8WXU2 420 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 DPF3Q92784 378 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 JARID2Q92833 1246 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-206ENST00000497147 FRAT1Q92837 279 aaPredicted RBP12.36□□□□□ -0.43
SCNM1-206ENST00000497147 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
SCNM1-206ENST00000497147 MYO3BQ8WXR4 1341 aa12.36□□□□□ -0.43
SCNM1-206ENST00000497147 CCDC152Q4G0S7 254 aa12.35□□□□□ -0.43
SCNM1-206ENST00000497147 SLC4A10Q6U841 1118 aa12.35□□□□□ -0.43
SCNM1-206ENST00000497147 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
SCNM1-206ENST00000497147 MYD88Q99836 296 aa12.35□□□□□ -0.43
SCNM1-206ENST00000497147 METTL22Q9BUU2 404 aaPredicted RBP12.35□□□□□ -0.43
SCNM1-206ENST00000497147 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
SCNM1-206ENST00000497147 PCDHAC2Q9Y5I4 1007 aa12.35□□□□□ -0.43
SCNM1-206ENST00000497147 COL1A1P02452 1464 aaPredicted RBP12.34□□□□□ -0.43
SCNM1-206ENST00000497147 UNCXA6NJT0 531 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 F6X3S4 739 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 PPP1R12BO60237 982 aaPredicted RBP12.34□□□□□ -0.43
SCNM1-206ENST00000497147 USP2O75604 605 aaPredicted RBP12.34□□□□□ -0.43
SCNM1-206ENST00000497147 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
SCNM1-206ENST00000497147 MMP14P50281 582 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
SCNM1-206ENST00000497147 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 LRCH3Q96II8 777 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 MINPP1Q9UNW1 487 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 AOX1Q06278 1338 aa12.34□□□□□ -0.43
SCNM1-206ENST00000497147 KLRK1P26718 216 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 MTFR1Q15390 333 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 ZKSCAN2Q63HK3 967 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 TTLL5Q6EMB2 1281 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 UBE2Q1Q7Z7E8 422 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 BRI3BPQ8WY22 251 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 ARHGAP45Q92619 1136 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 COA1Q9GZY4 146 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 VCANP13611 3396 aa12.33□□□□□ -0.44
SCNM1-206ENST00000497147 PDE8AO60658 829 aa12.32□□□□□ -0.44
SCNM1-206ENST00000497147 PCCAP05165 728 aaPredicted RBP12.32□□□□□ -0.44
SCNM1-206ENST00000497147 CCT4P50991 539 aaKnown RBP12.32□□□□□ -0.44
SCNM1-206ENST00000497147 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.32□□□□□ -0.44
SCNM1-206ENST00000497147 CNKSR2Q8WXI2 1034 aa12.32□□□□□ -0.44
SCNM1-206ENST00000497147 OPTNQ96CV9 577 aa12.32□□□□□ -0.44
SCNM1-206ENST00000497147 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
SCNM1-206ENST00000497147 PPP2R3BQ9Y5P8 575 aa12.32□□□□□ -0.44
SCNM1-206ENST00000497147 CLRN2A0PK11 232 aa12.31□□□□□ -0.44
SCNM1-206ENST00000497147 HSP90B1P14625 803 aaKnown RBP12.31□□□□□ -0.44
SCNM1-206ENST00000497147 IREB2P48200 963 aaKnown RBP12.31□□□□□ -0.44
SCNM1-206ENST00000497147 GTF2IP78347 998 aa12.31□□□□□ -0.44
SCNM1-206ENST00000497147 ARHGEF6Q15052 776 aa12.31□□□□□ -0.44
SCNM1-206ENST00000497147 DLGAP5Q15398 846 aa12.31□□□□□ -0.44
SCNM1-206ENST00000497147 TAF1CQ15572 869 aaPredicted RBP12.31□□□□□ -0.44
SCNM1-206ENST00000497147 CWF19L2Q2TBE0 894 aaKnown RBP12.31□□□□□ -0.44
SCNM1-206ENST00000497147 SUPT20HL1Q3ZLR7 823 aa12.31□□□□□ -0.44
SCNM1-206ENST00000497147 ATF7IPQ6VMQ6 1270 aa12.31□□□□□ -0.44
SCNM1-206ENST00000497147 FTSJ3Q8IY81 847 aaKnown RBP12.31□□□□□ -0.44
SCNM1-206ENST00000497147 ANKRD13AQ8IZ07 590 aa12.31□□□□□ -0.44
SCNM1-206ENST00000497147 FAM43AQ8N2R8 423 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms