RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PCSK7Q16549 785 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 LDLRAD1Q5T700 205 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 ALG1LQ6GMV1 187 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 PSAPL1Q6NUJ1 521 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 PRPF40BQ6NWY9 871 aaKnown RBP5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 CCNJLQ8IV13 435 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 GIPC2Q8TF65 315 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 NXPE3Q969Y0 559 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 PLD4Q96BZ4 506 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 POP1Q99575 1024 aaKnown RBP5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 DUSP9Q99956 384 aaKnown RBP5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 PBX4Q9BYU1 374 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 SUV39H2Q9H5I1 410 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 TNS2Q63HR2 1409 aa5.48□□□□□ -1.53
EXOSC3-208ENST00000496910 NID1P14543 1247 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 EIF2AK2P19525 551 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 AFF1P51825 1210 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 DAB2P98082 770 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 MRPL58Q14197 206 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 KANK3Q6NY19 840 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 LINC00114Q6XXX2 140 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 NCAPG2Q86XI2 1143 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 TMEM102Q8N9M5 508 aaPredicted RBP5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 OSMRQ99650 979 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 SMG9Q9H0W8 520 aaKnown RBP5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 ABCB6Q9NP58 842 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 KIAA1522Q9P206 1035 aaPredicted RBP5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 PARP2Q9UGN5 583 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 TRIM33Q9UPN9 1127 aa5.47□□□□□ -1.53
EXOSC3-208ENST00000496910 METTL12A8MUP2 240 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 M0R082 166 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 GNA15P30679 374 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 GRIA4P48058 902 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 SNRPNP63162 240 aaKnown RBP5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 TMC4Q7Z404 712 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 SVOPQ8N4V2 548 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 ZSCAN1Q8NBB4 408 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 C3orf58Q8NDZ4 430 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 ZNF417Q8TAU3 575 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 FAM161BQ96MY7 647 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 ZNF587Q96SQ5 575 aaPredicted RBP5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 ADAM19Q9H013 955 aa5.46□□□□□ -1.54
EXOSC3-208ENST00000496910 NHSL1Q5SYE7 1610 aa5.45□□□□□ -1.54
EXOSC3-208ENST00000496910 CTSHP09668 335 aa5.45□□□□□ -1.54
EXOSC3-208ENST00000496910 NUDT8Q8WV74 236 aa5.45□□□□□ -1.54
EXOSC3-208ENST00000496910 TRIM11Q96F44 468 aa5.45□□□□□ -1.54
EXOSC3-208ENST00000496910 BCO2Q9BYV7 579 aa5.45□□□□□ -1.54
EXOSC3-208ENST00000496910 SOX13Q9UN79 622 aa5.45□□□□□ -1.54
EXOSC3-208ENST00000496910 CACNA1AO00555 2505 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 PDE2AO00408 941 aaPredicted RBP5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 GHRHP01286 108 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 ALAS2P22557 587 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 ITPKAP23677 461 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 ATP2B2Q01814 1243 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 ELMSAN1Q6PJG2 1045 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 NXPE4Q6UWF7 544 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 VN1R5Q7Z5H4 357 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 C12orf49Q9H741 205 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 LIN7BQ9HAP6 207 aa5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 JPH1Q9HDC5 661 aaPredicted RBP5.44□□□□□ -1.54
EXOSC3-208ENST00000496910 CEP170Q5SW79 1584 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 RGS9O75916 674 aaPredicted RBP5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 EPHA1P21709 976 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 VAMP1P23763 118 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 SPRED3Q2MJR0 410 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 CEP135Q66GS9 1140 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 FRMD6Q96NE9 622 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 MUC3BQ9H195 1237 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 AK5Q9Y6K8 562 aa5.43□□□□□ -1.54
EXOSC3-208ENST00000496910 GLI2P10070 1586 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 ALKQ9UM73 1620 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 TMEM238LA0A1B0GVL6 79 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 DLL1O00548 723 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 GIPC1O14908 333 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 LILRB5O75023 590 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 RECKO95980 971 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 MAP3K10Q02779 954 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 PTPN12Q05209 780 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 DHX37Q8IY37 1157 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 ANKRD24Q8TF21 1146 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 MRRFQ96E11 262 aaKnown RBP5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 SPACA7Q96KW9 195 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 EHD4Q9H223 541 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 ZNF576Q9H609 170 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 NLRP2Q9NX02 1062 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 ADAMTS8Q9UP79 889 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 CHD4Q14839 1912 aa5.42□□□□□ -1.54
EXOSC3-208ENST00000496910 TEX14Q8IWB6 1497 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 A0A096LPE4 126 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 A0A1W2PPZ6 126 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 PPM1GO15355 546 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 GADD45BO75293 160 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 SMNDC1O75940 238 aaKnown RBP eCLIP5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 FGD1P98174 961 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 INSM1Q01101 510 aaPredicted RBP5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 FAAP100Q0VG06 881 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 ZNF326Q5BKZ1 582 aaKnown RBP5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 MSL1Q68DK7 614 aa5.41□□□□□ -1.54
EXOSC3-208ENST00000496910 BSNDQ8WZ55 320 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms