RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 LARGE2Q8N3Y3 721 aa22.23■■□□□ 1.15
RGP1-202ENST00000496906 EDC3Q96F86 508 aaKnown RBP22.23■■□□□ 1.15
RGP1-202ENST00000496906 PAG1Q9NWQ8 432 aa22.23■■□□□ 1.15
RGP1-202ENST00000496906 COL4A5P29400 1685 aa22.23■■□□□ 1.15
RGP1-202ENST00000496906 G3V3G9 751 aa22.22■■□□□ 1.15
RGP1-202ENST00000496906 ECE2O60344 883 aa22.22■■□□□ 1.15
RGP1-202ENST00000496906 DCAF8Q5TAQ9 597 aa22.22■■□□□ 1.15
RGP1-202ENST00000496906 ARHGAP27Q6ZUM4 889 aa22.22■■□□□ 1.15
RGP1-202ENST00000496906 PODNQ7Z5L7 613 aa22.22■■□□□ 1.15
RGP1-202ENST00000496906 UTRNP46939 3433 aa22.22■■□□□ 1.15
RGP1-202ENST00000496906 TRIM6-TRIM34B2RNG4 842 aa22.21■■□□□ 1.15
RGP1-202ENST00000496906 GOLIM4O00461 696 aa22.21■■□□□ 1.15
RGP1-202ENST00000496906 CYP2E1P05181 493 aaPredicted RBP22.21■■□□□ 1.15
RGP1-202ENST00000496906 CNTROBQ8N137 903 aa22.21■■□□□ 1.15
RGP1-202ENST00000496906 ANTXR1Q9H6X2 564 aa22.21■■□□□ 1.15
RGP1-202ENST00000496906 PRELPP51888 382 aa22.21■■□□□ 1.15
RGP1-202ENST00000496906 EVI5LQ96CN4 794 aa22.21■■□□□ 1.15
RGP1-202ENST00000496906 MYH13Q9UKX3 1938 aa22.2■■□□□ 1.14
RGP1-202ENST00000496906 CHAF1AQ13111 956 aaPredicted RBP22.2■■□□□ 1.14
RGP1-202ENST00000496906 RILPL2Q969X0 211 aa22.2■■□□□ 1.14
RGP1-202ENST00000496906 GPR162Q16538 588 aa22.19■■□□□ 1.14
RGP1-202ENST00000496906 JAG2Q9Y219 1238 aa22.19■■□□□ 1.14
RGP1-202ENST00000496906 CHD4Q14839 1912 aa22.19■■□□□ 1.14
RGP1-202ENST00000496906 FAM205AQ6ZU69 1335 aa22.19■■□□□ 1.14
RGP1-202ENST00000496906 YDJCA8MPS7 323 aa22.18■■□□□ 1.14
RGP1-202ENST00000496906 TTF1Q15361 905 aaPredicted RBP22.18■■□□□ 1.14
RGP1-202ENST00000496906 NIM1KQ8IY84 436 aa22.18■■□□□ 1.14
RGP1-202ENST00000496906 KBTBD3Q8NAB2 608 aa22.18■■□□□ 1.14
RGP1-202ENST00000496906 PIH1D3Q9NQM4 214 aaKnown RBP22.18■■□□□ 1.14
RGP1-202ENST00000496906 WDR66Q8TBY9 1149 aa22.17■■□□□ 1.14
RGP1-202ENST00000496906 SALL1Q9NSC2 1324 aa22.17■■□□□ 1.14
RGP1-202ENST00000496906 GTF2IP78347 998 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 TBC1D9Q6ZT07 1266 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 JDP2Q8WYK2 163 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 KCNQ5Q9NR82 932 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 SCN9AQ15858 1988 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 LMNB1P20700 586 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 FSD1Q9BTV5 496 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 ZNRF3Q9ULT6 936 aa22.16■■□□□ 1.14
RGP1-202ENST00000496906 GRIN3BO60391 1043 aa22.15■■□□□ 1.14
RGP1-202ENST00000496906 STRIP1Q5VSL9 837 aa22.15■■□□□ 1.14
RGP1-202ENST00000496906 TTLL5Q6EMB2 1281 aa22.15■■□□□ 1.14
RGP1-202ENST00000496906 RFX7Q2KHR2 1363 aa22.14■■□□□ 1.14
RGP1-202ENST00000496906 ZGPATQ8N5A5 531 aaKnown RBP22.14■■□□□ 1.13
RGP1-202ENST00000496906 TBC1D22AQ8WUA7 517 aa22.14■■□□□ 1.13
RGP1-202ENST00000496906 ABCF2Q9UG63 623 aa22.14■■□□□ 1.13
RGP1-202ENST00000496906 DOCK2Q92608 1830 aa22.14■■□□□ 1.13
RGP1-202ENST00000496906 USP17L3A6NCW0 530 aa22.13■■□□□ 1.13
RGP1-202ENST00000496906 USP17L4A6NCW7 530 aa22.13■■□□□ 1.13
RGP1-202ENST00000496906 MFSD14BQ5SR56 506 aa22.13■■□□□ 1.13
RGP1-202ENST00000496906 USP17L1Q7RTZ2 530 aa22.13■■□□□ 1.13
RGP1-202ENST00000496906 FBXW7Q969H0 707 aa22.13■■□□□ 1.13
RGP1-202ENST00000496906 ZNF646O15015 1829 aaPredicted RBP22.13■■□□□ 1.13
RGP1-202ENST00000496906 AK9Q5TCS8 1911 aa22.13■■□□□ 1.13
RGP1-202ENST00000496906 IDH1O75874 414 aaKnown RBP22.12■■□□□ 1.13
RGP1-202ENST00000496906 DACT2Q5SW24 774 aa22.12■■□□□ 1.13
RGP1-202ENST00000496906 LRP2BPQ9P2M1 347 aa22.12■■□□□ 1.13
RGP1-202ENST00000496906 SBF1O95248 1867 aa22.12■■□□□ 1.13
RGP1-202ENST00000496906 CDC45O75419 566 aa22.12■■□□□ 1.13
RGP1-202ENST00000496906 PRDX5P30044 214 aa22.12■■□□□ 1.13
RGP1-202ENST00000496906 FKBP1AP62942 108 aaKnown RBP22.12■■□□□ 1.13
RGP1-202ENST00000496906 TICAM2Q86XR7 235 aa22.12■■□□□ 1.13
RGP1-202ENST00000496906 PSME4Q14997 1843 aa22.11■■□□□ 1.13
RGP1-202ENST00000496906 FZD9O00144 591 aa22.11■■□□□ 1.13
RGP1-202ENST00000496906 MAP3K12Q12852 859 aa22.11■■□□□ 1.13
RGP1-202ENST00000496906 ERICH6Q7L0X2 663 aa22.11■■□□□ 1.13
RGP1-202ENST00000496906 CERS5Q8N5B7 392 aa22.11■■□□□ 1.13
RGP1-202ENST00000496906 CCDC88AQ3V6T2 1871 aa22.11■■□□□ 1.13
RGP1-202ENST00000496906 MYO5AQ9Y4I1 1855 aaKnown RBP22.1■■□□□ 1.13
RGP1-202ENST00000496906 RAD17O75943 681 aa22.1■■□□□ 1.13
RGP1-202ENST00000496906 CHMLP26374 656 aa22.1■■□□□ 1.13
RGP1-202ENST00000496906 GRIK5Q16478 980 aa22.1■■□□□ 1.13
RGP1-202ENST00000496906 LRRFIP1Q32MZ4 808 aaKnown RBP22.1■■□□□ 1.13
RGP1-202ENST00000496906 SPTY2D1Q68D10 685 aaPredicted RBP22.1■■□□□ 1.13
RGP1-202ENST00000496906 MXD3Q9BW11 206 aa22.1■■□□□ 1.13
RGP1-202ENST00000496906 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.1■■□□□ 1.13
RGP1-202ENST00000496906 DICER1Q9UPY3 1922 aaKnown RBP22.1■■□□□ 1.13
RGP1-202ENST00000496906 PSMD14O00487 310 aa22.09■■□□□ 1.13
RGP1-202ENST00000496906 IGSF3O75054 1194 aa22.09■■□□□ 1.13
RGP1-202ENST00000496906 CHGBP05060 677 aa22.09■■□□□ 1.13
RGP1-202ENST00000496906 LDHBP07195 334 aaKnown RBP22.09■■□□□ 1.13
RGP1-202ENST00000496906 CXCL9Q07325 125 aa22.09■■□□□ 1.13
RGP1-202ENST00000496906 RAI14Q9P0K7 980 aa22.09■■□□□ 1.13
RGP1-202ENST00000496906 RNF181Q9P0P0 153 aa22.09■■□□□ 1.13
RGP1-202ENST00000496906 SUGT1Q9Y2Z0 365 aa22.09■■□□□ 1.13
RGP1-202ENST00000496906 DCAF8L1A6NGE4 600 aa22.08■■□□□ 1.13
RGP1-202ENST00000496906 HIP1O00291 1037 aa22.08■■□□□ 1.13
RGP1-202ENST00000496906 RNF113AO15541 343 aaKnown RBP22.08■■□□□ 1.13
RGP1-202ENST00000496906 ZFYP08048 801 aaPredicted RBP22.08■■□□□ 1.13
RGP1-202ENST00000496906 VIL1P09327 827 aaKnown RBP22.08■■□□□ 1.13
RGP1-202ENST00000496906 ADD2P35612 726 aa22.08■■□□□ 1.13
RGP1-202ENST00000496906 SLC9C2Q5TAH2 1124 aa22.08■■□□□ 1.13
RGP1-202ENST00000496906 ZSCAN25Q6NSZ9 544 aa22.08■■□□□ 1.13
RGP1-202ENST00000496906 PDE6AP16499 860 aa22.08■■□□□ 1.12
RGP1-202ENST00000496906 C8orf34Q49A92 452 aa22.08■■□□□ 1.12
RGP1-202ENST00000496906 C9orf131Q5VYM1 1079 aa22.08■■□□□ 1.12
RGP1-202ENST00000496906 CIAPIN1Q6FI81 312 aa22.08■■□□□ 1.12
RGP1-202ENST00000496906 ZNF384Q8TF68 577 aa22.08■■□□□ 1.12
RGP1-202ENST00000496906 NSUN4Q96CB9 384 aaKnown RBP22.08■■□□□ 1.12
RGP1-202ENST00000496906 DIAPH3Q9NSV4 1193 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms