RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	MEGF10	Q96KG7	1140 aa		11.3	□□□□□ -0.6
TARDBP-210	ENST00000496840	NIF3L1	Q9GZT8	377 aa		11.3	□□□□□ -0.6
TARDBP-210	ENST00000496840	SEMA6B	Q9H3T3	888 aa		11.3	□□□□□ -0.6
TARDBP-210	ENST00000496840	KCNK4	Q9NYG8	393 aa		11.3	□□□□□ -0.6
TARDBP-210	ENST00000496840	EIF1AY	O14602	144 aa	Known RBP	11.29	□□□□□ -0.6
TARDBP-210	ENST00000496840	ARL4D	P49703	201 aa		11.29	□□□□□ -0.6
TARDBP-210	ENST00000496840	TMC7	Q7Z402	723 aa		11.29	□□□□□ -0.6
TARDBP-210	ENST00000496840	ASAP3	Q8TDY4	903 aa		11.29	□□□□□ -0.6
TARDBP-210	ENST00000496840	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.29	□□□□□ -0.6
TARDBP-210	ENST00000496840	TCF12	Q99081	682 aa		11.29	□□□□□ -0.6
TARDBP-210	ENST00000496840	SOX17	Q9H6I2	414 aa	Predicted RBP	11.29	□□□□□ -0.6
TARDBP-210	ENST00000496840	ADAM11	O75078	769 aa		11.28	□□□□□ -0.6
TARDBP-210	ENST00000496840	ALX3	O95076	343 aa		11.28	□□□□□ -0.6
TARDBP-210	ENST00000496840	WISP1	O95388	367 aa		11.28	□□□□□ -0.6
TARDBP-210	ENST00000496840	IKBKE	Q14164	716 aa		11.28	□□□□□ -0.6
TARDBP-210	ENST00000496840	LIN7B	Q9HAP6	207 aa		11.28	□□□□□ -0.6
TARDBP-210	ENST00000496840	ITGB7	P26010	798 aa		11.27	□□□□□ -0.61
TARDBP-210	ENST00000496840	C19orf57	Q0VDD7	668 aa		11.27	□□□□□ -0.61
TARDBP-210	ENST00000496840	ACAD11	Q709F0	780 aa		11.27	□□□□□ -0.61
TARDBP-210	ENST00000496840	CSRNP1	Q96S65	589 aa		11.27	□□□□□ -0.61
TARDBP-210	ENST00000496840	NPHS2	Q9NP85	383 aa		11.27	□□□□□ -0.61
TARDBP-210	ENST00000496840	SOX1	O00570	391 aa	Predicted RBP	11.26	□□□□□ -0.61
TARDBP-210	ENST00000496840	DUOXA2	Q1HG44	320 aa		11.26	□□□□□ -0.61
TARDBP-210	ENST00000496840	SLC7A3	Q8WY07	619 aa		11.26	□□□□□ -0.61
TARDBP-210	ENST00000496840	CCDC74A	Q96AQ1	378 aa		11.26	□□□□□ -0.61
TARDBP-210	ENST00000496840		A0A096LPE4	126 aa		11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840		A0A1W2PPZ6	126 aa		11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	METTL12	A8MUP2	240 aa		11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	DDX3Y	O15523	660 aa	Known RBP	11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	EIF4EBP3	O60516	100 aa	Predicted RBP	11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	ESRRA	P11474	423 aa	Predicted RBP	11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	MAPK1	P28482	360 aa		11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	KIAA1211	Q6ZU35	1233 aa		11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	AGGF1	Q8N302	714 aa	eCLIP	11.25	□□□□□ -0.61
TARDBP-210	ENST00000496840	GRIA4	P48058	902 aa		11.24	□□□□□ -0.61
TARDBP-210	ENST00000496840	DSC3	Q14574	896 aa		11.24	□□□□□ -0.61
TARDBP-210	ENST00000496840	HGSNAT	Q68CP4	663 aa		11.23	□□□□□ -0.61
TARDBP-210	ENST00000496840	UBASH3B	Q8TF42	649 aa		11.23	□□□□□ -0.61
TARDBP-210	ENST00000496840	CEP41	Q9BYV8	373 aa		11.23	□□□□□ -0.61
TARDBP-210	ENST00000496840	EHD4	Q9H223	541 aa		11.23	□□□□□ -0.61
TARDBP-210	ENST00000496840	CLEC4M	Q9H2X3	399 aa	Predicted RBP	11.23	□□□□□ -0.61
TARDBP-210	ENST00000496840	TREH	O43280	583 aa		11.22	□□□□□ -0.61
TARDBP-210	ENST00000496840	GLB1	P16278	677 aa		11.22	□□□□□ -0.61
TARDBP-210	ENST00000496840	PRPF40B	Q6NWY9	871 aa	Known RBP	11.22	□□□□□ -0.61
TARDBP-210	ENST00000496840	ITPKA	P23677	461 aa		11.21	□□□□□ -0.61
TARDBP-210	ENST00000496840	NLRP12	P59046	1061 aa		11.21	□□□□□ -0.61
TARDBP-210	ENST00000496840	PTPN12	Q05209	780 aa	Known RBP	11.21	□□□□□ -0.61
TARDBP-210	ENST00000496840	PCDH1	Q08174	1060 aa		11.2	□□□□□ -0.62
TARDBP-210	ENST00000496840	SPRED3	Q2MJR0	410 aa		11.2	□□□□□ -0.62
TARDBP-210	ENST00000496840	UVSSA	Q2YD98	709 aa		11.2	□□□□□ -0.62
TARDBP-210	ENST00000496840	PRR23C	Q6ZRP0	262 aa		11.2	□□□□□ -0.62
TARDBP-210	ENST00000496840	UBL7	Q96S82	380 aa	Predicted RBP	11.2	□□□□□ -0.62
TARDBP-210	ENST00000496840	RNF208	Q9H0X6	261 aa		11.2	□□□□□ -0.62
TARDBP-210	ENST00000496840	PLCB3	Q01970	1234 aa		11.19	□□□□□ -0.62
TARDBP-210	ENST00000496840	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.19	□□□□□ -0.62
TARDBP-210	ENST00000496840	ABCB6	Q9NP58	842 aa		11.19	□□□□□ -0.62
TARDBP-210	ENST00000496840	TRAK1	Q9UPV9	953 aa		11.19	□□□□□ -0.62
TARDBP-210	ENST00000496840	MEGF11	A6BM72	1044 aa		11.18	□□□□□ -0.62
TARDBP-210	ENST00000496840	GADD45B	O75293	160 aa	Predicted RBP	11.18	□□□□□ -0.62
TARDBP-210	ENST00000496840	PRSS36	Q5K4E3	855 aa		11.18	□□□□□ -0.62
TARDBP-210	ENST00000496840	ANKRD34A	Q69YU3	496 aa		11.18	□□□□□ -0.62
TARDBP-210	ENST00000496840	ASB16	Q96NS5	453 aa		11.18	□□□□□ -0.62
TARDBP-210	ENST00000496840	RUSC1	Q9BVN2	902 aa		11.18	□□□□□ -0.62
TARDBP-210	ENST00000496840	ZNF576	Q9H609	170 aa		11.18	□□□□□ -0.62
TARDBP-210	ENST00000496840	PDIA4	P13667	645 aa	Known RBP	11.17	□□□□□ -0.62
TARDBP-210	ENST00000496840	ENOX2	Q16206	610 aa	Known RBP	11.17	□□□□□ -0.62
TARDBP-210	ENST00000496840	ZNF423	Q2M1K9	1284 aa		11.17	□□□□□ -0.62
TARDBP-210	ENST00000496840	FAM46A	Q96IP4	442 aa	Known RBP	11.17	□□□□□ -0.62
TARDBP-210	ENST00000496840	LOC100289279	A0A1B0GTE1	492 aa		11.16	□□□□□ -0.62
TARDBP-210	ENST00000496840	B3GALT4	O96024	378 aa		11.16	□□□□□ -0.62
TARDBP-210	ENST00000496840	GRM2	Q14416	872 aa		11.16	□□□□□ -0.62
TARDBP-210	ENST00000496840	GLIS3	Q8NEA6	775 aa		11.16	□□□□□ -0.62
TARDBP-210	ENST00000496840	EPS8L3	Q8TE67	593 aa	Known RBP	11.16	□□□□□ -0.62
TARDBP-210	ENST00000496840	NRSN2	Q9GZP1	204 aa		11.16	□□□□□ -0.62
TARDBP-210	ENST00000496840	TMEM238L	A0A1B0GVL6	79 aa		11.15	□□□□□ -0.62
TARDBP-210	ENST00000496840	GSTM4	Q03013	218 aa		11.15	□□□□□ -0.62
TARDBP-210	ENST00000496840	FMR1	Q06787	632 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
TARDBP-210	ENST00000496840	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.15	□□□□□ -0.62
TARDBP-210	ENST00000496840	ARMC10	Q8N2F6	343 aa		11.15	□□□□□ -0.62
TARDBP-210	ENST00000496840	TMPRSS13	Q9BYE2	586 aa		11.15	□□□□□ -0.62
TARDBP-210	ENST00000496840	NLRP2	Q9NX02	1062 aa		11.15	□□□□□ -0.62
TARDBP-210	ENST00000496840	PNMA6F	A0A0J9YX94	578 aa		11.14	□□□□□ -0.63
TARDBP-210	ENST00000496840	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	11.14	□□□□□ -0.63
TARDBP-210	ENST00000496840	SLC51A	Q86UW1	340 aa		11.14	□□□□□ -0.63
TARDBP-210	ENST00000496840	USP26	Q9BXU7	913 aa		11.14	□□□□□ -0.63
TARDBP-210	ENST00000496840	SUGCT	Q9HAC7	445 aa		11.14	□□□□□ -0.63
TARDBP-210	ENST00000496840	DHX15	O43143	795 aa	Known RBP	11.13	□□□□□ -0.63
TARDBP-210	ENST00000496840	DDX54	Q8TDD1	881 aa	Known RBP	11.13	□□□□□ -0.63
TARDBP-210	ENST00000496840	CYP11A1	P05108	521 aa		11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	FDX2	Q6P4F2	183 aa		11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	SMG8	Q8ND04	991 aa	Known RBP	11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	FBF1	Q8TES7	1133 aa		11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	UTP4	Q969X6	686 aa	Known RBP	11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	MYRFL	Q96LU7	910 aa		11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	KRTAP9-2	Q9BYQ4	174 aa		11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	ZFYVE1	Q9HBF4	777 aa		11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	RAX	Q9Y2V3	346 aa		11.12	□□□□□ -0.63
TARDBP-210	ENST00000496840	PREP	P48147	710 aa		11.11	□□□□□ -0.63
TARDBP-210	ENST00000496840	PPP4R2	Q9NY27	417 aa		11.11	□□□□□ -0.63

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